PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr18	44497395	44497499	CAGE_peak_1_at_PIAS2_5end
chr18	44500088	44500095	CAGE_peak_6_at_PIAS2_5end
chr18	44500101	44500115	CAGE_peak_2_at_PIAS2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I046768	46768598	46768747	0.2	[{'connected_gene': 'PIAS2', 'score': 10.67}, {'connected_gene': 'IER3IP1', 'score': 5.82}, {'connected_gene': 'ST8SIA5', 'score': 0.44}, {'connected_gene': 'LOC105372097', 'score': 0.39}, {'connected_gene': 'ENSG00000274776', 'score': 0.34}]
chr18	GH18I046792	46792175	46792443	0.26	[{'connected_gene': 'PIAS2', 'score': 12.55}, {'connected_gene': 'RNF165', 'score': 1.87}, {'connected_gene': 'ENSG00000274776', 'score': 0.77}, {'connected_gene': 'GC18P046803', 'score': 0.39}]
chr18	GH18I046767	46767876	46768270	0.31	[{'connected_gene': 'PIAS2', 'score': 10.67}, {'connected_gene': 'LOC105372097', 'score': 9.02}, {'connected_gene': 'ST8SIA5', 'score': 0.44}, {'connected_gene': 'ENSG00000274776', 'score': 0.34}]
chr18	GH18I046806	46806324	46806384	0.23	[{'connected_gene': 'HDHD2', 'score': 1.53}, {'connected_gene': 'GC18P046803', 'score': 0.77}, {'connected_gene': 'GC18M046804', 'score': 0.77}, {'connected_gene': 'GC18P046836', 'score': 0.31}, {'connected_gene': 'PIAS2', 'score': 0.14}]
chr18	GH18I046916	46916000	46918893	1.94	[{'connected_gene': 'KATNAL2', 'score': 563.91}, {'connected_gene': 'ENSG00000279354', 'score': 550.77}, {'connected_gene': 'PIAS2', 'score': 550.77}, {'connected_gene': 'HDHD2', 'score': 6.94}, {'connected_gene': 'LOC105372097', 'score': 5.9}]
chr18	GH18I046898	46898798	46900105	0.38	[{'connected_gene': 'ELOA2', 'score': 10.37}, {'connected_gene': 'ELOA3', 'score': 10.37}, {'connected_gene': 'IER3IP1', 'score': 7.75}, {'connected_gene': 'HDHD2', 'score': 6.66}, {'connected_gene': 'ENSG00000279354', 'score': 0.37}, {'connected_gene': 'PIAS2', 'score': 0.34}, {'connected_gene': 'LOC100421737', 'score': 0.26}]
chr18	GH18I046710	46710619	46713317	1	[{'connected_gene': 'ST8SIA5', 'score': 19.39}, {'connected_gene': 'PIAS2', 'score': 10.09}, {'connected_gene': 'RPS21P6', 'score': 0.39}, {'connected_gene': 'LOC105372096', 'score': 0.25}]
chr18	GH18I046754	46754401	46758324	1.44	[{'connected_gene': 'LOC105372097', 'score': 567.23}, {'connected_gene': 'ST8SIA5', 'score': 550.77}, {'connected_gene': 'PIAS2', 'score': 10.39}, {'connected_gene': 'HDHD2', 'score': 6.55}, {'connected_gene': 'IER3IP1', 'score': 5.82}, {'connected_gene': 'RPS21P6', 'score': 0.29}]
chr18	GH18I046859	46859458	46859607	0.38	[{'connected_gene': 'LOC100421737', 'score': 0.77}, {'connected_gene': 'GC18P046836', 'score': 0.34}, {'connected_gene': 'ENSG00000279354', 'score': 0.22}, {'connected_gene': 'PIAS2', 'score': 0.21}]
chr18	GH18I047243	47243900	47244913	0.83	[{'connected_gene': 'GC18P047244', 'score': 550.77}, {'connected_gene': 'ENSG00000267724', 'score': 10.4}, {'connected_gene': 'HDHD2', 'score': 9.33}, {'connected_gene': 'PIAS2', 'score': 6.9}, {'connected_gene': 'SKOR2', 'score': 0.44}, {'connected_gene': 'GC18M047235', 'score': 0.44}, {'connected_gene': 'RNU6-1131P', 'score': 0.44}, {'connected_gene': 'GC18P047085', 'score': 0.1}]
chr18	GH18I046790	46790260	46790600	0.24	[{'connected_gene': 'ENSG00000274776', 'score': 550.77}, {'connected_gene': 'KATNAL2', 'score': 14.07}, {'connected_gene': 'PIAS2', 'score': 13.45}, {'connected_gene': 'RNF165', 'score': 1.36}, {'connected_gene': 'GC18P046803', 'score': 0.39}]
chr18	GH18I047235	47235778	47235796	0.37	[{'connected_gene': 'GC18M047235', 'score': 550.77}, {'connected_gene': 'RNU6-1131P', 'score': 550.77}, {'connected_gene': 'KATNAL2', 'score': 4.32}, {'connected_gene': 'PIAS2', 'score': 1.2}, {'connected_gene': 'GC18P047244', 'score': 0.44}, {'connected_gene': 'SKOR2', 'score': 0.37}, {'connected_gene': 'GC18P047085', 'score': 0.1}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000585916	[[44388352, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497308]]	[[44392395, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497308]]
ENST00000398654	[[44392242, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44470542, 44471017], [44497284, 44497417]]	[[44435528, 44435578], [44470542, 44471017], [44497284, 44497308]]
ENST00000545673	[[44398153, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44497284, 44497468]]	[[44398339, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424793]]
ENST00000324794	[[44398317, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497466]]	[[44398339, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497308]]
ENST00000592212	[[44407371, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44483489, 44483598]]	None
ENST00000590127	[[44407720, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497437]]	None
ENST00000592011	[[44416205, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44500021, 44500123]]	None
ENST00000589819	[[44426426, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444195]]	None
ENST00000591865	[[44423813, 44424090], [44424696, 44424934]]	None
ENST00000589917	[[44470648, 44471017], [44483489, 44483596], [44500021, 44500106]]	[[44470648, 44471014]]
ENST00000586953	[[44470771, 44471017], [44496791, 44497042]]	[[44470771, 44471017], [44496791, 44496809]]
ENST00000592221	[[44470856, 44471017], [44483489, 44483596], [44484064, 44484169], [44486189, 44486278], [44497964, 44498004]]	[[44470856, 44471017], [44483489, 44483596], [44484064, 44484065]]
ENST00000587810	[[44470856, 44471017], [44483489, 44483596], [44486189, 44486278], [44500021, 44500111]]	[[44470856, 44471017], [44483489, 44483596], [44486189, 44486208]]
ENST00000586170	[[44470994, 44471017], [44473393, 44473494], [44483489, 44483598], [44497284, 44497383]]	None
ENST00000586634	[[44485722, 44486278], [44497284, 44497313]]	None
ENST00000590944	[[44487460, 44487522], [44487620, 44487962]]	None
NM_001324049	[[44383186, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44482397, 44482520], [44483489, 44483598], [44486189, 44486278], [44497284, 44497495]]	[[44392395, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324048	[[44383186, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44483489, 44483598], [44486189, 44486278], [44497284, 44497495]]	[[44392395, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324046	[[44383186, 44392549], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44483489, 44483598], [44486189, 44486278], [44497284, 44497495]]	[[44392492, 44392549], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324047	[[44383186, 44392578], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44483489, 44483598], [44497284, 44497495]]	[[44392395, 44392578], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_004671	[[44383186, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497495]]	[[44392395, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497308]]
NR_136684	[[44383186, 44392575], [44395274, 44395312], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44470542, 44471017], [44497284, 44497495]]	None
NM_001324053	[[44395672, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44474773, 44475033], [44483489, 44483598], [44486189, 44486278], [44497284, 44497495]]	[[44398339, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324052	[[44395672, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44473393, 44473494], [44483489, 44483598], [44486189, 44486278], [44497284, 44497495]]	[[44398339, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324054	[[44395672, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44486189, 44486278], [44497284, 44497495]]	[[44398339, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324051	[[44395672, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44483489, 44483598], [44497284, 44497495]]	[[44398339, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_173206	[[44395672, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497495]]	[[44398339, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497308]]
NR_136685	[[44395672, 44398410], [44400895, 44401035], [44407921, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44497284, 44497495]]	None
NM_001324055	[[44403248, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44483489, 44483598], [44486170, 44486278], [44497284, 44497495]]	[[44407905, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324057	[[44403248, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44473393, 44473494], [44483489, 44483598], [44486189, 44486278], [44497284, 44497495]]	[[44407905, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324059	[[44403248, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44483489, 44483598], [44486189, 44486278], [44497284, 44497495]]	[[44407905, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471014]]
NM_001324058	[[44403248, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497495]]	[[44407905, 44408093], [44409696, 44409830], [44416319, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44497284, 44497308]]
NM_001324060	[[44416208, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44500021, 44500130]]	[[44416315, 44416480], [44424016, 44424090], [44424696, 44424802], [44426669, 44426804], [44435307, 44435398], [44435527, 44435578], [44444126, 44444211], [44470542, 44471017], [44500021, 44500057]]