PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000569412	[[87401257, 87401551], [87423342, 87423454], [87425688, 87425713]]	None
ENST00000567622	[[87419616, 87419812], [87422294, 87422364], [87423342, 87423454], [87425688, 87425748]]	None
ENST00000311635	[[87360592, 87365116], [87367491, 87367892], [87368909, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377371], [87380779, 87380856], [87393900, 87393972], [87417010, 87417363]]	[[87364893, 87365116], [87367491, 87367892], [87368909, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377371], [87380779, 87380856], [87393900, 87393972], [87417010, 87417350]]
ENST00000565593	[[87362941, 87365116], [87367491, 87367727], [87417063, 87417369]]	[[87367594, 87367727], [87417063, 87417350]]
ENST00000563113	[[87368953, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377371], [87380779, 87380856], [87393900, 87393972], [87423342, 87423456]]	[[87368953, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377344]]
ENST00000561664	[[87377351, 87377371], [87380779, 87380856], [87393900, 87393972], [87400978, 87401114]]	None
ENST00000563956	[[87401350, 87401551], [87417010, 87417357]]	None
NM_001282683	[[87360592, 87365116], [87367491, 87367892], [87368909, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377371], [87380779, 87380856], [87393900, 87393972], [87423342, 87423454], [87425688, 87425713]]	[[87364893, 87365116], [87367491, 87367892], [87368909, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377344]]
NM_024735	[[87360592, 87365116], [87367491, 87367892], [87368909, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377371], [87380779, 87380856], [87393900, 87393972], [87417010, 87417399]]	[[87364893, 87365116], [87367491, 87367892], [87368909, 87369063], [87369760, 87369870], [87376482, 87376557], [87377203, 87377371], [87380779, 87380856], [87393900, 87393972], [87417010, 87417350]]

Promoter

Chrom	Start	End	Description
chr16	87415070	87415094	CAGE_peak_4_at_FBXO31_5end
chr16	87417328	87417339	CAGE_peak_3_at_FBXO31_5end
chr16	87417351	87417392	CAGE_peak_1_at_FBXO31_5end
chr16	87425644	87425738	CAGE_peak_2_at_FBXO31_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I087379	87379079	87380030	1.06	[{'connected_gene': 'MAP1LC3B', 'score': 0.77}, {'connected_gene': 'PIR52096', 'score': 0.39}, {'connected_gene': 'FBXO31', 'score': 0.39}]
chr16	GH16I087864	87864973	87873764	2.59	[{'connected_gene': 'SLC7A5', 'score': 550.77}, {'connected_gene': 'ZC3H18', 'score': 34.93}, {'connected_gene': 'BANP', 'score': 23.48}, {'connected_gene': 'KLHDC4', 'score': 21.68}, {'connected_gene': 'ZCCHC14', 'score': 14.83}, {'connected_gene': 'CTU2', 'score': 10.73}, {'connected_gene': 'TRAPPC2L', 'score': 10.13}, {'connected_gene': 'CA5A', 'score': 8.33}, {'connected_gene': 'MAP1LC3B', 'score': 1.77}, {'connected_gene': 'FBXO31', 'score': 1.41}, {'connected_gene': 'PIR45032', 'score': 0.44}]
chr16	GH16I087390	87390698	87394724	2.3	[{'connected_gene': 'FBXO31', 'score': 561.08}, {'connected_gene': 'MAP1LC3B', 'score': 550.44}, {'connected_gene': 'MTHFSD', 'score': 46.57}, {'connected_gene': 'BANP', 'score': 27.43}, {'connected_gene': 'KLHDC4', 'score': 10.07}, {'connected_gene': 'ZCCHC14', 'score': 9.95}, {'connected_gene': 'ENSG00000261592', 'score': 0.44}]
chr16	GH16I087375	87375407	87377085	1.07	[{'connected_gene': 'FBXO31', 'score': 9.61}, {'connected_gene': 'MAP1LC3B', 'score': 0.44}, {'connected_gene': 'PIR52096', 'score': 0.44}]
chr16	GH16I087369	87369987	87372234	0.78	[{'connected_gene': 'FBXO31', 'score': 10.05}, {'connected_gene': 'PIR52096', 'score': 0.77}, {'connected_gene': 'MAP1LC3B', 'score': 0.39}]
chr16	GH16I087431	87431549	87432872	0.58	[{'connected_gene': 'FBXO31', 'score': 11.76}, {'connected_gene': 'KLHDC4', 'score': 10.0}, {'connected_gene': 'NR3C1P1', 'score': 0.29}, {'connected_gene': 'ENSG00000261592', 'score': 0.29}, {'connected_gene': 'ZCCHC14', 'score': 0.21}]
chr16	GH16I087435	87435099	87437693	0.96	[{'connected_gene': 'FBXO31', 'score': 11.76}, {'connected_gene': 'KLHDC4', 'score': 9.99}, {'connected_gene': 'LOC100129215', 'score': 4.8}, {'connected_gene': 'NR3C1P1', 'score': 0.29}, {'connected_gene': 'ENSG00000261592', 'score': 0.28}, {'connected_gene': 'ZCCHC14', 'score': 0.22}]
chr16	GH16I087324	87324815	87324964	0.67	[{'connected_gene': 'FBXO31', 'score': 12.2}, {'connected_gene': 'ENSG00000270082', 'score': 0.77}, {'connected_gene': 'ENSG00000131152', 'score': 0.44}, {'connected_gene': 'LOC101928659', 'score': 0.44}]
chr16	GH16I087303	87303223	87304123	0.81	[{'connected_gene': 'FBXO31', 'score': 10.82}, {'connected_gene': 'C16orf95', 'score': 7.17}, {'connected_gene': 'ENSG00000280419', 'score': 0.44}, {'connected_gene': 'ENSG00000131152', 'score': 0.29}]
chr16	GH16I087344	87344563	87346534	1.18	[{'connected_gene': 'FBXO31', 'score': 8.62}, {'connected_gene': 'C16orf95', 'score': 7.56}, {'connected_gene': 'ENSG00000131152', 'score': 0.39}, {'connected_gene': 'ENSG00000269901', 'score': 0.37}]
chr16	GH16I087357	87357606	87360350	0.31	[{'connected_gene': 'FBXO31', 'score': 12.8}, {'connected_gene': 'ENSG00000131152', 'score': 12.13}, {'connected_gene': 'C16orf95', 'score': 12.05}, {'connected_gene': 'ENSG00000269901', 'score': 0.77}]
chr16	GH16I087380	87380351	87385621	2.33	[{'connected_gene': 'FBXO31', 'score': 578.11}, {'connected_gene': 'TRM-CAT6-1', 'score': 550.77}, {'connected_gene': 'MAP1LC3B', 'score': 550.77}, {'connected_gene': 'GC16M087385', 'score': 550.77}, {'connected_gene': 'ZCCHC14', 'score': 24.88}, {'connected_gene': 'PIR52096', 'score': 0.37}]
chr16	GH16I087350	87350398	87352134	0.58	[{'connected_gene': 'FBXO31', 'score': 7.3}, {'connected_gene': 'ENSG00000269901', 'score': 0.39}, {'connected_gene': 'ENSG00000131152', 'score': 0.37}]
chr16	GH16I087787	87787716	87792567	1.64	[{'connected_gene': 'CA5A', 'score': 16.84}, {'connected_gene': 'BANP', 'score': 12.12}, {'connected_gene': 'FBXO31', 'score': 11.16}, {'connected_gene': 'CTU2', 'score': 10.27}, {'connected_gene': 'KLHDC4', 'score': 5.37}, {'connected_gene': 'LOC102724467', 'score': 0.39}, {'connected_gene': 'ENSG00000260177', 'score': 0.37}]
chr16	GH16I087386	87386060	87390017	1.31	[{'connected_gene': 'MTHFSD', 'score': 24.58}, {'connected_gene': 'FBXO31', 'score': 18.97}, {'connected_gene': 'ZCCHC14', 'score': 18.86}, {'connected_gene': 'KLHDC4', 'score': 10.07}, {'connected_gene': 'BANP', 'score': 9.81}, {'connected_gene': 'TRM-CAT6-1', 'score': 0.77}, {'connected_gene': 'MAP1LC3B', 'score': 0.77}, {'connected_gene': 'GC16M087385', 'score': 0.77}]
chr16	GH16I087550	87550475	87550624	0.76	[{'connected_gene': 'JPH3', 'score': 11.64}, {'connected_gene': 'FBXO31', 'score': 4.73}, {'connected_gene': 'PIR35253', 'score': 0.29}]
chr16	GH16I087841	87841021	87863965	1.85	[{'connected_gene': 'BANP', 'score': 14.56}, {'connected_gene': 'SLC7A5', 'score': 11.53}, {'connected_gene': 'FBXO31', 'score': 6.14}, {'connected_gene': 'LOC400553', 'score': 6.09}, {'connected_gene': 'ZCCHC14', 'score': 5.21}, {'connected_gene': 'APRT', 'score': 4.94}, {'connected_gene': 'MAP1LC3B', 'score': 3.1}, {'connected_gene': 'CA5A', 'score': 3.1}, {'connected_gene': 'KLHDC4', 'score': 1.74}, {'connected_gene': 'PIR45032', 'score': 0.44}, {'connected_gene': 'ENSG00000260466', 'score': 0.37}]
chr16	GH16I087947	87947657	87958141	2.88	[{'connected_gene': 'BANP', 'score': 605.57}, {'connected_gene': 'ZC3H18', 'score': 22.36}, {'connected_gene': 'ZCCHC14', 'score': 13.31}, {'connected_gene': 'GALNS', 'score': 13.06}, {'connected_gene': 'ENSG00000269901', 'score': 10.08}, {'connected_gene': 'FBXO31', 'score': 10.05}, {'connected_gene': 'LOC400553', 'score': 6.58}, {'connected_gene': 'SLC7A5', 'score': 1.32}, {'connected_gene': 'PIR49178', 'score': 0.26}]
chr16	GH16I087446	87446343	87449524	0.76	[{'connected_gene': 'KLHDC4', 'score': 9.49}, {'connected_gene': 'FBXO31', 'score': 7.39}, {'connected_gene': 'NR3C1P1', 'score': 0.37}, {'connected_gene': 'ZCCHC14', 'score': 0.26}, {'connected_gene': 'ENSG00000261592', 'score': 0.25}]
chr16	GH16I087455	87455301	87459353	1.15	[{'connected_gene': 'KLHDC4', 'score': 9.81}, {'connected_gene': 'FBXO31', 'score': 7.36}, {'connected_gene': 'ZCCHC14', 'score': 5.29}, {'connected_gene': 'NR3C1P1', 'score': 0.44}, {'connected_gene': 'ENSG00000261592', 'score': 0.22}]
chr16	GH16I087459	87459709	87467630	1.73	[{'connected_gene': 'KLHDC4', 'score': 10.07}, {'connected_gene': 'LOC101928659', 'score': 9.87}, {'connected_gene': 'ZCCHC14', 'score': 8.6}, {'connected_gene': 'MAP1LC3B', 'score': 7.12}, {'connected_gene': 'FBXO31', 'score': 6.14}, {'connected_gene': 'BANP', 'score': 4.27}, {'connected_gene': 'NR3C1P1', 'score': 0.77}, {'connected_gene': 'ENSG00000261592', 'score': 0.21}]
chr16	GH16I087722	87722645	87726084	1.39	[{'connected_gene': 'KLHDC4', 'score': 26.61}, {'connected_gene': 'ENSG00000260671', 'score': 16.02}, {'connected_gene': 'LOC100129215', 'score': 12.28}, {'connected_gene': 'ENSG00000260121', 'score': 11.41}, {'connected_gene': 'ZC3H18', 'score': 10.46}, {'connected_gene': 'C16orf95', 'score': 5.48}, {'connected_gene': 'ENSG00000260466', 'score': 5.01}, {'connected_gene': 'JPH3', 'score': 2.41}, {'connected_gene': 'FBXO31', 'score': 1.36}, {'connected_gene': 'ZCCHC14', 'score': 1.18}, {'connected_gene': 'LOC105371397', 'score': 0.34}]
chr16	GH16I087481	87481482	87483291	0.31	[{'connected_gene': 'ZCCHC14', 'score': 7.24}, {'connected_gene': 'FBXO31', 'score': 5.95}, {'connected_gene': 'ENSG00000276337', 'score': 0.44}]
chr16	GH16I087305	87305533	87306844	1.05	[{'connected_gene': 'C16orf95', 'score': 12.71}, {'connected_gene': 'FBXO31', 'score': 10.82}, {'connected_gene': 'ENSG00000280419', 'score': 0.44}, {'connected_gene': 'ENSG00000131152', 'score': 0.31}]
chr16	GH16I087385	87385692	87385732	0.4	[{'connected_gene': 'TRM-CAT6-1', 'score': 550.77}, {'connected_gene': 'MAP1LC3B', 'score': 550.77}, {'connected_gene': 'GC16M087385', 'score': 550.77}, {'connected_gene': 'FBXO31', 'score': 0.44}]
chr16	GH16I087368	87368800	87369000	0.38	[{'connected_gene': 'PIR52096', 'score': 550.77}, {'connected_gene': 'MAP1LC3B', 'score': 0.37}, {'connected_gene': 'FBXO31', 'score': 0.34}]
chr16	GH16I087474	87474455	87475299	0.94	[{'connected_gene': 'ENSG00000276337', 'score': 550.77}, {'connected_gene': 'FBXO31', 'score': 6.17}, {'connected_gene': 'ZCCHC14', 'score': 0.37}]
chr16	GH16I087325	87325363	87327602	0.43	[{'connected_gene': 'PIR60566', 'score': 550.77}, {'connected_gene': 'ENSG00000270082', 'score': 550.77}, {'connected_gene': 'PIR45740', 'score': 550.77}, {'connected_gene': 'FBXO31', 'score': 17.78}, {'connected_gene': 'C16orf95', 'score': 7.57}, {'connected_gene': 'ENSG00000131152', 'score': 0.44}, {'connected_gene': 'LOC101928659', 'score': 0.44}]
chr16	GH16I087297	87297995	87298144	0.54	[{'connected_gene': 'ENSG00000280419', 'score': 550.77}, {'connected_gene': 'FBXO31', 'score': 10.82}, {'connected_gene': 'C16orf95', 'score': 0.37}]
chr16	GH16I087362	87362339	87363221	0.43	[{'connected_gene': 'ENSG00000269901', 'score': 550.77}, {'connected_gene': 'FBXO31', 'score': 10.43}, {'connected_gene': 'PIR52096', 'score': 0.77}]
chr16	GH16I087329	87329003	87330228	0.2	[{'connected_gene': 'PIR41100', 'score': 550.77}, {'connected_gene': 'PIR38647', 'score': 550.77}, {'connected_gene': 'PIR45740', 'score': 550.77}, {'connected_gene': 'FBXO31', 'score': 12.21}, {'connected_gene': 'ENSG00000131152', 'score': 0.77}]
chr16	GH16I087366	87366393	87366868	0.31	[{'connected_gene': 'PIR52096', 'score': 550.77}, {'connected_gene': 'ENSG00000269901', 'score': 0.77}, {'connected_gene': 'FBXO31', 'score': 0.31}]
chr16	GH16I087363	87363395	87364746	0.8	[{'connected_gene': 'ENSG00000269901', 'score': 550.77}, {'connected_gene': 'FBXO31', 'score': 10.12}, {'connected_gene': 'PIR52096', 'score': 0.77}]
chr16	GH16I087360	87360423	87362092	0.38	[{'connected_gene': 'ENSG00000269901', 'score': 550.77}, {'connected_gene': 'KLHDC4', 'score': 14.06}, {'connected_gene': 'FBXO31', 'score': 12.8}, {'connected_gene': 'MTHFSD', 'score': 11.73}, {'connected_gene': 'ENSG00000131152', 'score': 11.52}, {'connected_gene': 'C16orf95', 'score': 11.47}, {'connected_gene': 'ZCCHC14', 'score': 10.19}]
chr16	GH16I087407	87407195	87408182	1.15	[{'connected_gene': 'ENSG00000131152', 'score': 11.41}, {'connected_gene': 'C16orf95', 'score': 11.37}, {'connected_gene': 'FBXO31', 'score': 7.58}, {'connected_gene': 'ENSG00000261592', 'score': 0.44}, {'connected_gene': 'NR3C1P1', 'score': 0.22}, {'connected_gene': 'ZCCHC14', 'score': 0.18}]
chr16	GH16I087332	87332670	87333495	0.2	[{'connected_gene': 'ENSG00000131152', 'score': 550.77}, {'connected_gene': 'C16orf95', 'score': 8.01}, {'connected_gene': 'PIR41100', 'score': 0.77}, {'connected_gene': 'FBXO31', 'score': 0.22}]