PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000457913	[[109625377, 109625636], [109685634, 109685884], [109686413, 109692040], [109692805, 109692970], [109694546, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773763]]	[[109685664, 109685884], [109686413, 109692040], [109692805, 109692970], [109694546, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773311]]
ENST00000277225	[[109625377, 109625636], [109685634, 109685884], [109686413, 109692040], [109692805, 109692970], [109694726, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109775915]]	[[109685664, 109685884], [109686413, 109692040], [109692805, 109692970], [109694726, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773311]]
ENST00000374686	[[109689544, 109692040], [109692805, 109692970], [109694546, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773789]]	[[109689544, 109692040], [109692805, 109692970], [109694546, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773311]]
ENST00000441147	[[109689658, 109692040], [109692805, 109692970], [109694543, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773763]]	[[109689658, 109692040], [109692805, 109692970], [109694543, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773311]]
ENST00000469433	[[109694888, 109695086], [109697783, 109697902], [109734285, 109734553], [109736417, 109736501]]	None
ENST00000542028	[[109694913, 109695086], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773504]]	[[109697796, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773311]]
ENST00000479166	[[109694917, 109695086], [109697783, 109697902], [109701196, 109701388], [109734285, 109734506]]	None
ENST00000427098	[[109701257, 109701388], [109734285, 109734553], [109736417, 109737251]]	[[109701257, 109701388], [109734285, 109734553], [109736417, 109736643]]
ENST00000472574	[[109625446, 109625636], [109685634, 109685884], [109686413, 109686473], [109692805, 109692856]]	[[109685664, 109685884], [109686413, 109686473], [109692805, 109692856]]
ENST00000480607	[[109689205, 109689445], [109692805, 109692970], [109694726, 109694743]]	None
ENST00000497489	[[109691960, 109692040], [109692805, 109692970], [109693125, 109693318], [109694546, 109694830], [109697783, 109697902]]	None
ENST00000471032	[[109694901, 109695086], [109695455, 109695510], [109697783, 109697902], [109701196, 109701375]]	None
ENST00000482115	[[109734422, 109734553], [109736417, 109736554], [109746466, 109746690], [109757800, 109757963]]	None
ENST00000483287	[[109771469, 109771949], [109773103, 109773299]]	None
NM_001347997	[[109625377, 109625636], [109685634, 109685884], [109686413, 109689445], [109692805, 109692970], [109694726, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109775915]]	[[109685664, 109685884], [109686413, 109689445], [109692805, 109692970], [109694726, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773311]]
NM_021224	[[109625377, 109625636], [109685634, 109685884], [109686413, 109692040], [109692805, 109692970], [109694726, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109775915]]	[[109685664, 109685884], [109686413, 109692040], [109692805, 109692970], [109694726, 109694830], [109697783, 109697902], [109701196, 109701388], [109734285, 109734553], [109736417, 109736554], [109746466, 109746690], [109765574, 109765707], [109771825, 109771949], [109773103, 109773311]]

Promoter

Chrom	Start	End	Description
chr9	109625229	109625282	CAGE_peak_2_at_ZNF462_5end
chr9	109625401	109625458	CAGE_peak_1_at_ZNF462_5end
chr9	109694899	109694904	CAGE_peak_16_at_ZNF462_5end
chr9	109694916	109694927	CAGE_peak_13_at_ZNF462_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I106914	106914606	106923574	1.7	[{'connected_gene': 'ZNF462', 'score': 15.97}, {'connected_gene': 'GC09P106921', 'score': 0.77}, {'connected_gene': 'LOC105376204', 'score': 0.22}]
chr9	GH09I106874	106874740	106874869	0.52	[{'connected_gene': 'ZNF462', 'score': 0.39}, {'connected_gene': 'LOC105376204', 'score': 0.39}, {'connected_gene': 'GC09P106921', 'score': 0.25}]
chr9	GH09I106888	106888372	106894449	1.47	[{'connected_gene': 'ZNF462', 'score': 23.61}, {'connected_gene': 'GC09P106921', 'score': 0.29}, {'connected_gene': 'LOC105376204', 'score': 0.29}]
chr9	GH09I106876	106876843	106882883	1.04	[{'connected_gene': 'ZNF462', 'score': 16.58}, {'connected_gene': 'LOC105376204', 'score': 0.37}, {'connected_gene': 'GC09P106921', 'score': 0.26}]
chr9	GH09I106868	106868600	106869729	1.03	[{'connected_gene': 'ZNF462', 'score': 0.44}, {'connected_gene': 'LOC105376204', 'score': 0.44}, {'connected_gene': 'GC09P106921', 'score': 0.23}]
chr9	GH09I106884	106884029	106887572	1.11	[{'connected_gene': 'ZNF462', 'score': 23.97}, {'connected_gene': 'LOC105376204', 'score': 0.34}, {'connected_gene': 'GC09P106921', 'score': 0.28}]
chr9	GH09I106906	106906272	106907727	0.31	[{'connected_gene': 'ZNF462', 'score': 6.84}, {'connected_gene': 'GC09P106921', 'score': 0.39}, {'connected_gene': 'LOC105376204', 'score': 0.25}]
chr9	GH09I106866	106866380	106866528	0.68	[{'connected_gene': 'ZNF462', 'score': 0.44}, {'connected_gene': 'LOC105376204', 'score': 0.44}, {'connected_gene': 'GC09P106921', 'score': 0.22}]
chr9	GH09I106875	106874201	106874601	0.46	[{'connected_gene': 'ZNF462', 'score': 0.39}, {'connected_gene': 'LOC105376204', 'score': 0.39}, {'connected_gene': 'GC09P106921', 'score': 0.25}]
chr9	GH09I106877	106876401	106876600	0.2	[{'connected_gene': 'ZNF462', 'score': 0.37}, {'connected_gene': 'LOC105376204', 'score': 0.37}, {'connected_gene': 'GC09P106921', 'score': 0.26}]
chr9	GH09I106859	106859432	106865591	2.42	[{'connected_gene': 'ZNF462', 'score': 571.14}, {'connected_gene': 'LOC105376204', 'score': 550.77}, {'connected_gene': 'GC09P106921', 'score': 0.22}]
chr9	GH09I106643	106643380	106643399	0.46	[{'connected_gene': 'ZNF462', 'score': 10.32}, {'connected_gene': 'GC09P106637', 'score': 0.44}, {'connected_gene': 'LINC01505', 'score': 0.31}, {'connected_gene': 'GC09P106680', 'score': 0.28}]
chr9	GH09I106797	106797440	106800387	0.67	[{'connected_gene': 'ZNF462', 'score': 17.48}, {'connected_gene': 'RNA5SP292', 'score': 0.26}, {'connected_gene': 'LOC100288437', 'score': 0.18}]
chr9	GH09I106793	106793837	106794860	0.72	[{'connected_gene': 'ZNF462', 'score': 18.2}, {'connected_gene': 'RNA5SP292', 'score': 0.25}, {'connected_gene': 'LOC100288437', 'score': 0.19}]
chr9	GH09I106830	106830086	106831409	0.31	[{'connected_gene': 'ZNF462', 'score': 13.8}, {'connected_gene': 'RNA5SP292', 'score': 0.39}, {'connected_gene': 'LOC100288437', 'score': 0.14}]
chr9	GH09I106717	106717349	106719936	0.43	[{'connected_gene': 'ZNF462', 'score': 15.37}, {'connected_gene': 'LOC100288437', 'score': 0.77}, {'connected_gene': 'RN7SKP77', 'score': 0.28}]
chr9	GH09I106752	106752215	106753671	0.77	[{'connected_gene': 'ZNF462', 'score': 10.82}, {'connected_gene': 'LOC100288437', 'score': 0.29}, {'connected_gene': 'RNA5SP292', 'score': 0.16}]
chr9	GH09I107019	107019141	107020632	0.8	[{'connected_gene': 'ZNF462', 'score': 25.33}, {'connected_gene': 'RPL7AP44', 'score': 0.26}, {'connected_gene': 'LOC340512', 'score': 0.18}]
chr9	GH09I106956	106956647	106957429	0.31	[{'connected_gene': 'ZNF462', 'score': 10.77}, {'connected_gene': 'RPL7AP44', 'score': 0.34}, {'connected_gene': 'GC09P106921', 'score': 0.28}]
chr9	GH09I106969	106969802	106971333	0.43	[{'connected_gene': 'ZNF462', 'score': 21.04}, {'connected_gene': 'RPL7AP44', 'score': 0.44}, {'connected_gene': 'GC09P106921', 'score': 0.25}]
chr9	GH09I106929	106929009	106930229	0.2	[{'connected_gene': 'ZNF462', 'score': 8.07}, {'connected_gene': 'GC09P106921', 'score': 0.44}, {'connected_gene': 'RPL7AP44', 'score': 0.25}]
chr9	GH09I106961	106961660	106964389	0.89	[{'connected_gene': 'ZNF462', 'score': 19.34}, {'connected_gene': 'RPL7AP44', 'score': 0.37}, {'connected_gene': 'GC09P106921', 'score': 0.26}]
chr9	GH09I106945	106945639	106947909	0.69	[{'connected_gene': 'ZNF462', 'score': 10.97}, {'connected_gene': 'GC09P106921', 'score': 0.31}, {'connected_gene': 'RPL7AP44', 'score': 0.29}]
chr9	GH09I106958	106958171	106959002	0.31	[{'connected_gene': 'ZNF462', 'score': 19.11}, {'connected_gene': 'RPL7AP44', 'score': 0.34}, {'connected_gene': 'GC09P106921', 'score': 0.28}]
chr9	GH09I106964	106964440	106964589	0.63	[{'connected_gene': 'ZNF462', 'score': 10.66}, {'connected_gene': 'RPL7AP44', 'score': 0.37}, {'connected_gene': 'GC09P106921', 'score': 0.26}]
chr9	GH09I106870	106870533	106871219	0.2	[{'connected_gene': 'LOC105376204', 'score': 0.44}, {'connected_gene': 'ZNF462', 'score': 0.39}, {'connected_gene': 'GC09P106921', 'score': 0.23}]
chr9	GH09I106957	106955936	106956029	0.2	[{'connected_gene': 'RPL7AP44', 'score': 0.34}, {'connected_gene': 'GC09P106921', 'score': 0.29}, {'connected_gene': 'ZNF462', 'score': 0.15}]
chr9	GH09I106954	106954681	106955377	0.49	[{'connected_gene': 'RPL7AP44', 'score': 0.34}, {'connected_gene': 'GC09P106921', 'score': 0.29}, {'connected_gene': 'ZNF462', 'score': 0.16}]
chr9	GH09I106952	106952471	106954088	0.68	[{'connected_gene': 'RPL7AP44', 'score': 0.31}, {'connected_gene': 'GC09P106921', 'score': 0.29}, {'connected_gene': 'ZNF462', 'score': 0.16}]
chr9	GH09I106955	106955880	106955909	0.2	[{'connected_gene': 'RPL7AP44', 'score': 0.34}, {'connected_gene': 'GC09P106921', 'score': 0.29}, {'connected_gene': 'ZNF462', 'score': 0.15}]
chr9	GH09I106897	106897282	106898000	0.78	[{'connected_gene': 'GC09P106921', 'score': 0.34}, {'connected_gene': 'ZNF462', 'score': 0.28}, {'connected_gene': 'LOC105376204', 'score': 0.28}]
chr9	GH09I106931	106931182	106932213	0.51	[{'connected_gene': 'GC09P106921', 'score': 0.39}, {'connected_gene': 'RPL7AP44', 'score': 0.25}, {'connected_gene': 'ZNF462', 'score': 0.19}]
chr9	GH09I106930	106930352	106930766	0.51	[{'connected_gene': 'GC09P106921', 'score': 0.44}, {'connected_gene': 'RPL7AP44', 'score': 0.25}, {'connected_gene': 'ZNF462', 'score': 0.19}]