PPI network (data source: BioGrid)

Symbol A GeneA coding DNM count Symbol B GeneB coding DNM count Interaction detection method Publication Evidence
NXF1 0 CCT2 1 affinity chromatography technology Castello A (2012) 1
NOD1 3 NOD2 1 affinity chromatography technology, affinity chromatography technology Travassos LH (2010), Travassos LH (2010) 2
MAP1LC3B 1 ATG3 4 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Behrends C (2010), Tanida I (2004), Gao W (2013) 3
WDFY3 17 ATG16L1 1 affinity chromatography technology Filimonenko M (2010) 1
ULK1 8 TRIM16 0 enzymatic study, affinity chromatography technology Chauhan S (2016), Chauhan S (2016) 2
MAP1LC3C 0 ATG16L1 1 affinity chromatography technology Behrends C (2010) 1
GAN 4 CCT3 1 affinity chromatography technology Johnson-Kerner BL (2015) 1
RAB35 0 APP 1 pull down Olah J (2011) 1
CCT2 1 CCT3 1 biochemical, biochemical, biochemical, affinity chromatography technology Havugimana PC (2012), Kristensen AR (2012), Wan C (2015), Huttlin EL (2017) 4
MOV10 6 HSPA4 3 affinity chromatography technology Castello A (2012) 1
MOV10 6 ATG16L1 1 affinity chromatography technology Castello A (2012) 1
IKBIP 2 ATG5 0 affinity chromatography technology Huttlin EL (2017) 1
GAN 4 CCT2 1 affinity chromatography technology Johnson-Kerner BL (2015) 1
XPO1 8 ATG12 1 affinity chromatography technology Kirli K (2015) 1
SCOC 3 ATG16L1 1 affinity chromatography technology Huttlin EL (2017) 1
COLEC12 2 IKBIP 2 affinity chromatography technology Huttlin EL (2017) 1
ATG16L1 1 CLTC 12 affinity chromatography technology, affinity chromatography technology Ravikumar B (2010), Ravikumar B (2010) 2
MAP1LC3C 0 UBC 7 imaging technique Liu X (2017) 1
ATG12 1 ATG16L1 1 affinity chromatography technology, affinity chromatography technology Ewing RM (2007), Behrends C (2010) 2
UBC 7 CCT7 2 affinity chromatography technology Bish RA (2007) 1
AP2M1 5 UBC 7 affinity chromatography technology, pull down Brehme M (2009), Zhang X (2017) 2
TRIM16 0 ATG16L1 1 affinity chromatography technology, affinity chromatography technology Chauhan S (2016), Chauhan S (2016) 2
ELAVL1 0 IKBIP 2 affinity chromatography technology Abdelmohsen K (2009) 1
ATG5 0 WDFY3 17 affinity chromatography technology, pull down Filimonenko M (2010), Filimonenko M (2010) 2
RB1CC1 9 ATG5 0 affinity chromatography technology Gammoh N (2013) 1
IKBKG 0 ATG16L1 1 affinity chromatography technology Bouwmeester T (2004) 1
UBC 7 PSMC3 0 affinity chromatography technology, pull down, pull down Matsumoto M (2005), Jacobson AD (2014), Zhang X (2017) 3
ATG3 4 ATG5 0 affinity chromatography technology, pull down, affinity chromatography technology Behrends C (2010), Qiu Y (2013), Huttlin EL (2017) 3
IKBIP 2 APP 1 pull down Olah J (2011) 1
ATG16L1 1 AP2M1 5 affinity chromatography technology Ravikumar B (2010) 1
OPTN 1 IKBKG 0 affinity chromatography technology Nakazawa S (2016) 1
NXF1 0 CLTC 12 affinity chromatography technology Castello A (2012) 1
XPO1 8 ATG5 0 affinity chromatography technology Kirli K (2015) 1
ATG16L1 1 ULK1 8 affinity chromatography technology Gammoh N (2013) 1
ATG16L1 1 CCT2 1 affinity chromatography technology Behrends C (2010) 1
ATG3 4 ATG16L1 1 affinity chromatography technology, affinity chromatography technology Behrends C (2010), Huttlin EL (2017) 2
ELAVL1 0 DVL2 5 affinity chromatography technology Abdelmohsen K (2009) 1
COLEC12 2 APP 1 pull down Olah J (2011) 1
ATG16L1 1 FCGRT 0 affinity chromatography technology Ravikumar B (2010) 1
MAP1LC3B 1 ATG5 0 affinity chromatography technology Behrends C (2010) 1
MAP1LC3C 0 ATG13 0 affinity chromatography technology Alemu EA (2012) 1
TRIP11 5 ATG16L1 1 affinity chromatography technology Boldt K (2016) 1
ATG16L1 1 RAB35 0 affinity chromatography technology, affinity chromatography technology Itoh T (2008), Itoh T (2008) 2
MEFV 3 ULK1 8 affinity chromatography technology, pull down Kimura T (2015), Kimura T (2015) 2
COLEC12 2 ATG16L1 1 affinity chromatography technology Huttlin EL (2017) 1
ATG16L1 1 AGPS 1 affinity chromatography technology Behrends C (2010) 1
GAN 4 CCT7 2 affinity chromatography technology Johnson-Kerner BL (2015) 1
WIPI2 5 ATG5 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Dooley HC (2014), Huttlin EL (2015), Huttlin EL (2017) 3
ATG16L1 1 HSPA4 3 affinity chromatography technology Ravikumar B (2010) 1
OPTN 1 WIPI2 5 affinity chromatography technology, pull down Bansal M (2018), Bansal M (2018) 2
ATG16L1 1 TRAF3IP3 0 affinity chromatography technology Boada-Romero E (2013) 1
IKBIP 2 ATG16L1 1 affinity chromatography technology Huttlin EL (2017) 1
UBC 7 ATG16L1 1 affinity chromatography technology, pull down, pull down Fujita N (2013), Fujita N (2013), Ver Heul AM (2013) 3
MAP1LC3B 1 UBC 7 imaging technique Liu X (2017) 1
MOV10 6 NOD1 3 affinity chromatography technology Castello A (2012) 1
ATG16L1 1 GAN 4 affinity chromatography technology Behrends C (2010) 1
RAB33B 0 ATG16L1 1 affinity chromatography technology, affinity chromatography technology, pull down Itoh T (2008), Itoh T (2008), Itoh T (2008) 3
UBC 7 CCT3 1 affinity chromatography technology, affinity chromatography technology Matsumoto M (2005), Bish RA (2007) 2
ELAVL1 0 XPO1 8 affinity chromatography technology Abdelmohsen K (2009) 1
AP2M1 5 DVL2 5 two hybrid Rual JF (2005) 1
ATG16L1 1 ATG5 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, x-ray crystallography, biochemical, x-ray crystallography, two hybrid, pull down, affinity chromatography technology Behrends C (2010), Behrends C (2010), Chen D (2012), Chen D (2012), Ravikumar B (2010), Itoh T (2008), Kristensen AR (2012), Gammoh N (2013), Otomo C (2013), Wan C (2015), Kim JH (2014), Kim JH (2014), Kim JH (2014), Zheng Y (2017) 14
MAP1LC3C 0 ATG3 4 affinity chromatography technology Behrends C (2010) 1
NXF1 0 XPO1 8 affinity chromatography technology Bachi A (2000) 1
DVL2 5 ATG16L1 1 affinity chromatography technology Ma B (2015) 1
WIPI2 5 ATG12 1 affinity chromatography technology Dooley HC (2014) 1
ELAVL1 0 TMEM59 0 affinity chromatography technology Abdelmohsen K (2009) 1
OPTN 1 MAP1LC3C 0 two hybrid Tumbarello DA (2015) 1
ATG16L1 1 TNK2 7 affinity chromatography technology, imaging technique Jones S (2014), Jones S (2014) 2
ATG13 0 RB1CC1 9 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Behrends C (2010), Behrends C (2010), Hosokawa N (2009) 3
MAP1LC3B 1 ATG16L1 1 affinity chromatography technology Behrends C (2010) 1
ATG16L1 1 ATG13 0 affinity chromatography technology Gammoh N (2013) 1
ELAVL1 0 ATG5 0 affinity chromatography technology Abdelmohsen K (2009) 1
NOD2 1 UBC 7 x-ray crystallography Ver Heul AM (2013) 1
IRGM 1 NOD2 1 affinity chromatography technology, affinity chromatography technology, pull down Chauhan S (2015), Chauhan S (2015), Chauhan S (2015) 3
ATG16L1 1 CCT7 2 affinity chromatography technology Behrends C (2010) 1
XPO1 8 ATG16L1 1 affinity chromatography technology Kirli K (2015) 1
ELAVL1 0 ATG16L1 1 affinity chromatography technology Abdelmohsen K (2009) 1
CLTC 12 HSPA4 3 affinity chromatography technology Hein MY (2015) 1
ATG16L1 1 DEDD2 1 affinity chromatography technology Boada-Romero E (2013) 1
CLTC 12 CCT3 1 biochemical Wan C (2015) 1
UBC 7 ATG13 0 affinity chromatography technology Matsumoto M (2005) 1
CCT2 1 CCT7 2 biochemical, biochemical, biochemical, affinity chromatography technology Havugimana PC (2012), Kristensen AR (2012), Wan C (2015), Huttlin EL (2017) 4
RAB3D 0 APP 1 pull down Olah J (2011) 1
CCT3 1 CCT7 2 biochemical, biochemical, biochemical, affinity chromatography technology Havugimana PC (2012), Kristensen AR (2012), Wan C (2015), Huttlin EL (2017) 4
NXF1 0 CCT7 2 affinity chromatography technology Castello A (2012) 1
NXF1 0 ATG16L1 1 affinity chromatography technology Castello A (2012) 1
PMF1 0 ATG16L1 1 affinity chromatography technology Huttlin EL (2017) 1
MAP1LC3C 0 ULK1 8 affinity chromatography technology Alemu EA (2012) 1
ATG12 1 ATG5 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Ewing RM (2007), Behrends C (2010), Behrends C (2010), Chen D (2012), Zheng Y (2017) 5
IKBKG 0 HSPA4 3 affinity chromatography technology Ammirante M (2010) 1
ULK1 8 RB1CC1 9 affinity chromatography technology, affinity chromatography technology Behrends C (2010), Rui YN (2015) 2
NXF1 0 HSPA4 3 affinity chromatography technology Castello A (2012) 1
HSPA4 3 APP 1 affinity chromatography technology Kumar P (2007) 1
XPO1 8 ATG3 4 affinity chromatography technology Kirli K (2015) 1
NXF1 0 UBC 7 affinity chromatography technology Castello A (2012) 1
UBC 7 NOD1 3 pull down, x-ray crystallography Ver Heul AM (2013), Ver Heul AM (2013) 2
ATG12 1 APP 1 pull down Olah J (2011) 1
ATG5 0 OPTN 1 pull down, affinity chromatography technology, pull down Fracchiolla D (2016), Bansal M (2018), Bansal M (2018) 3
ATG13 0 APP 1 pull down Olah J (2011) 1
ATG16L1 1 NOD1 3 affinity chromatography technology, affinity chromatography technology, pull down Travassos LH (2010), Travassos LH (2010), Ver Heul AM (2013) 3
ULK1 8 ATG13 0 enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology Dunlop EA (2011), Nazio F (2013), Nazio F (2013), Hosokawa N (2009), Li J (2015), Dunlop EA (2014), Rui YN (2015) 7
MEFV 3 ATG16L1 1 affinity chromatography technology Kimura T (2015) 1
ATG16L1 1 RAB33A 0 affinity chromatography technology, affinity chromatography technology, pull down Itoh T (2008), Itoh T (2008), Itoh T (2008) 3
TMEM59 0 ATG16L1 1 affinity chromatography technology, affinity chromatography technology, pull down Boada-Romero E (2013), Boada-Romero E (2013), Boada-Romero E (2013) 3
NOD2 1 IKBKG 0 affinity chromatography technology Damgaard RB (2012) 1
MAP1LC3C 0 WDFY3 17 affinity chromatography technology, pull down Lystad AH (2014), Lystad AH (2014) 2
IRGM 1 ULK1 8 affinity chromatography technology Chauhan S (2015) 1
MAP1LC3C 0 RB1CC1 9 affinity chromatography technology Behrends C (2010) 1
MOV10 6 UBC 7 affinity chromatography technology Castello A (2012) 1
TRIM16 0 APP 1 pull down Olah J (2011) 1
SPC25 0 ATG16L1 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
AP2M1 5 COLEC12 2 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
ATG16L1 1 CCT3 1 affinity chromatography technology Behrends C (2010) 1
OPTN 1 UBC 7 affinity chromatography technology, pull down, pull down, pull down, two hybrid, pull down, pull down, pull down, pull down, pull down, pull down, pull down, enzymatic study, pull down, pull down, pull down, pull down, pull down Wild P (2011), Fenner BJ (2009), Zhu G (2007), Zhu G (2007), Wagner S (2008), Gleason CE (2011), Nagabhushana A (2011), Korac J (2012), Wild P (2011), Tumbarello DA (2015), Heo JM (2015), Ordureau A (2015), Richter B (2016), Richter B (2016), Nakazawa S (2016), Zhang X (2017), Kliza K (2017), Bansal M (2018) 18
XPO1 8 DVL2 5 affinity chromatography technology Kirli K (2015) 1
MEFV 3 MAP1LC3C 0 pull down Kimura T (2015) 1
TNK2 7 CLTC 12 pull down, pull down, affinity chromatography technology, affinity chromatography technology Teo M (2001), Liu NS (2009), Hein MY (2015), Mahendrarajah N (2017) 4
ATG16L1 1 NOD2 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Boada-Romero E (2013), Travassos LH (2010), Travassos LH (2010) 3
AP2M1 5 CLTC 12 affinity chromatography technology, affinity chromatography technology Brehme M (2009), Hein MY (2015) 2
MOV10 6 CCT7 2 affinity chromatography technology Castello A (2012) 1
MOV10 6 TRIM16 0 affinity chromatography technology Castello A (2012) 1
SYNPO2 1 ATG16L1 1 affinity chromatography technology Ulbricht A (2013) 1
MAP1LC3B 1 ULK1 8 affinity chromatography technology Alemu EA (2012) 1
PSMC3 0 ATG16L1 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
IRGM 1 ATG16L1 1 affinity chromatography technology, affinity chromatography technology Chauhan S (2015), Chauhan S (2015) 2
ATG3 4 ATG12 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology Tanida I (2002), Behrends C (2010), Behrends C (2010), Radoshevich L (2010), Qiu Y (2013), Huttlin EL (2017) 6
MOV10 6 PSMC3 0 affinity chromatography technology Castello A (2012) 1
MAP1LC3C 0 ATG5 0 affinity chromatography technology Behrends C (2010) 1
MOV10 6 WDFY3 17 affinity chromatography technology Castello A (2012) 1
UBC 7 IKBKG 0 pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, x-ray crystallography, pull down, unspecified method, x-ray crystallography, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down, x-ray crystallography, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, two hybrid, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down Dynek JN (2010), Dynek JN (2010), Chiaravalli J (2011), Laplantine E (2009), Hubeau M (2011), Lo YC (2009), Ikeda F (2010), Cordier F (2009), Cordier F (2009), Cordier F (2009), Renner F (2011), Fenner BJ (2009), Fenner BJ (2009), Ivins FJ (2009), Rahighi S (2009), Rahighi S (2009), Zhu G (2007), Zhu G (2007), Niu J (2011), Keusekotten K (2013), van Wijk SJ (2013), Hooper C (2014), Wagner S (2008), Saul VV (2014), Gleason CE (2011), Komander D (2009), Kensche T (2012), Skaug B (2011), Ea CK (2006), Ea CK (2006), Lo YC (2009), Laplantine E (2009), Laplantine E (2009), Emmerich CH (2013), Dubosclard V (2015), Vincendeau M (2015), Vincendeau M (2016), Zhang X (2017), Fang R (2017), Kliza K (2017), Joo D (2016), Fang R (2017), Hauenstein AV (2017) 43
NXF1 0 TRIM16 0 affinity chromatography technology Castello A (2012) 1
XPO1 8 AP2M1 5 affinity chromatography technology Kirli K (2015) 1
IRGM 1 NOD1 3 affinity chromatography technology Chauhan S (2015) 1
ATG16L1 1 SNAPC4 6 affinity chromatography technology Behrends C (2010) 1
HSPA4 3 CCT2 1 biochemical Wan C (2015) 1
WDFY3 17 ATG12 1 affinity chromatography technology Filimonenko M (2010) 1
RB1CC1 9 UBC 7 pull down Choi JD (2012) 1
UBC 7 CCT2 1 affinity chromatography technology Bish RA (2007) 1
CCT7 2 APP 1 pull down Olah J (2011) 1
WIPI2 5 ATG16L1 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Dooley HC (2014), Huttlin EL (2015), Huttlin EL (2017) 3
MAP1LC3B 1 OPTN 1 imaging technique, unspecified method, pull down, x-ray crystallography, affinity chromatography technology, pull down Wild P (2011), Wild P (2011), Rogov VV (2013), Rogov VV (2013), Rogov VV (2013), Wild P (2011) 6
ATG16L1 1 APP 1 pull down Olah J (2011) 1
ATG16L1 1 ATG16L1 1 biochemical, biochemical Parkhouse R (2013), Parkhouse R (2013) 2
TRIM16 0 OPTN 1 affinity chromatography technology Huttlin EL (2017) 1
RB1CC1 9 ATG16L1 1 affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology Fujita N (2013), Fujita N (2013), Gammoh N (2013), Gammoh N (2013), Gammoh N (2013), Gammoh N (2013), Dooley HC (2014) 7
ATG16L1 1 TLR2 0 affinity chromatography technology Boada-Romero E (2013) 1
SPC25 0 PMF1 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
NXF1 0 PSMC3 0 affinity chromatography technology Castello A (2012) 1
RAB3D 0 ATG16L1 1 affinity chromatography technology, affinity chromatography technology Itoh T (2008), Itoh T (2008) 2
OPTN 1 ATG16L1 1 affinity chromatography technology, pull down Bansal M (2018), Bansal M (2018) 2
NXF1 0 WDFY3 17 affinity chromatography technology Castello A (2012) 1
MAP1LC3B 1 ATG13 0 affinity chromatography technology Alemu EA (2012) 1