PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000356509	[[24775158, 24775340], [24777449, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786323]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786027]]
ENST00000230056	[[24775165, 24775472], [24777449, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786327]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786027]]
ENST00000468943	[[24775176, 24775340], [24777449, 24777964]]	None
ENST00000378054	[[24775640, 24775730], [24777449, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24785935]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24785935]]
ENST00000476555	[[24775694, 24776052], [24777449, 24777525], [24780890, 24780968], [24781704, 24781772]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781772]]
ENST00000378059	[[24777093, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784347]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784347]]
NM_001251990	[[24775158, 24775264], [24777449, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786327]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786027]]
NM_001251989	[[24775158, 24775340], [24777449, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786327]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786027]]
NM_015895	[[24775158, 24775472], [24777449, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786327]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786027]]
NM_001251991	[[24775640, 24775730], [24777449, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786327]]	[[24777474, 24777525], [24780890, 24780968], [24781704, 24781849], [24784314, 24784397], [24784671, 24784782], [24785865, 24786027]]

Promoter

Chrom	Start	End	Description
chr6	24775153	24775242	CAGE_peak_1_at_GMNN_5end
chr6	24775648	24775710	CAGE_peak_2_at_GMNN_5end
chr6	24777040	24777071	CAGE_peak_3_at_GMNN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I024763	24763210	24764518	0.63	[{'connected_gene': 'C6orf62', 'score': 12.07}, {'connected_gene': 'KIAA0319', 'score': 10.65}, {'connected_gene': 'ENSG00000272402', 'score': 5.25}, {'connected_gene': 'GMNN', 'score': 4.93}, {'connected_gene': 'LOC100289381', 'score': 0.39}]
chr6	GH06I024778	24778812	24780145	0.83	[{'connected_gene': 'C6orf62', 'score': 12.09}, {'connected_gene': 'GMNN', 'score': 6.14}, {'connected_gene': 'C6orf229', 'score': 0.37}]
chr6	GH06I024766	24766833	24766962	0.62	[{'connected_gene': 'C6orf62', 'score': 12.48}, {'connected_gene': 'GMNN', 'score': 0.44}, {'connected_gene': 'LOC100289381', 'score': 0.37}]
chr6	GH06I024770	24770686	24772329	0.88	[{'connected_gene': 'C6orf62', 'score': 24.34}, {'connected_gene': 'GMNN', 'score': 6.06}, {'connected_gene': 'ENSG00000272402', 'score': 5.28}, {'connected_gene': 'LOC100289381', 'score': 0.37}]
chr6	GH06I024683	24683327	24685253	0.76	[{'connected_gene': 'TDP2', 'score': 14.41}, {'connected_gene': 'KIAA0319', 'score': 11.05}, {'connected_gene': 'GMNN', 'score': 10.79}, {'connected_gene': 'ENSG00000272345', 'score': 0.37}, {'connected_gene': 'ACOT13', 'score': 0.37}]
chr6	GH06I024744	24744950	24745542	0.52	[{'connected_gene': 'GMNN', 'score': 12.12}, {'connected_gene': 'C6orf62', 'score': 12.02}, {'connected_gene': 'TDP2', 'score': 5.64}, {'connected_gene': 'LOC105374978', 'score': 0.77}, {'connected_gene': 'LOC100289381', 'score': 0.44}]
chr6	GH06I024773	24773670	24778457	2.12	[{'connected_gene': 'GMNN', 'score': 556.14}, {'connected_gene': 'NUP50P2', 'score': 13.01}, {'connected_gene': 'ENSG00000272402', 'score': 10.03}, {'connected_gene': 'C6orf229', 'score': 0.34}]
chr6	GH06I024780	24780253	24780402	0.38	[{'connected_gene': 'GMNN', 'score': 0.44}, {'connected_gene': 'C6orf229', 'score': 0.37}]
chr6	GH06I024742	24742235	24744856	1.39	[{'connected_gene': 'LOC105374978', 'score': 550.77}, {'connected_gene': 'C6orf62', 'score': 12.87}, {'connected_gene': 'GMNN', 'score': 12.1}, {'connected_gene': 'KIAA0319', 'score': 10.42}, {'connected_gene': 'TDP2', 'score': 4.73}, {'connected_gene': 'KRT8P43', 'score': 4.49}, {'connected_gene': 'LOC100289381', 'score': 0.44}]
chr6	GH06I024799	24799585	24799976	0.7	[{'connected_gene': 'C6orf229', 'score': 550.77}, {'connected_gene': 'GMNN', 'score': 5.72}, {'connected_gene': 'ALDH5A1', 'score': 3.28}, {'connected_gene': 'DCDC2', 'score': 3.18}, {'connected_gene': 'GPLD1', 'score': 1.58}, {'connected_gene': 'ENSG00000282804', 'score': 0.39}]