PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000230588	[[46761126, 46761204], [46761288, 46761313], [46761402, 46761453], [46766342, 46766383], [46766842, 46766918], [46777156, 46777274], [46787265, 46787441], [46793008, 46793230], [46794090, 46794240], [46797092, 46797308], [46800810, 46801275], [46802314, 46802488], [46802985, 46803286], [46806716, 46807515]]	[[46761135, 46761204], [46761288, 46761313], [46761402, 46761453], [46766342, 46766383], [46766842, 46766918], [46777156, 46777274], [46787265, 46787441], [46793008, 46793230], [46794090, 46794240], [46797092, 46797308], [46800810, 46801275], [46802314, 46802488], [46802985, 46803286], [46806716, 46806873]]
NM_005588	[[46761093, 46761204], [46761288, 46761313], [46761402, 46761453], [46766342, 46766383], [46766842, 46766918], [46777156, 46777274], [46787265, 46787441], [46793008, 46793230], [46794090, 46794240], [46797092, 46797308], [46800810, 46801275], [46802314, 46802488], [46802985, 46803286], [46806716, 46807519]]	[[46761135, 46761204], [46761288, 46761313], [46761402, 46761453], [46766342, 46766383], [46766842, 46766918], [46777156, 46777274], [46787265, 46787441], [46793008, 46793230], [46794090, 46794240], [46797092, 46797308], [46800810, 46801275], [46802314, 46802488], [46802985, 46803286], [46806716, 46806873]]

Promoter

Chrom	Start	End	Description
chr6	46761118	46761132	CAGE_peak_1_at_MEP1A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I046770	46770604	46774599	1.29	[{'connected_gene': 'PLA2G7', 'score': 14.09}, {'connected_gene': 'MEP1A', 'score': 11.16}, {'connected_gene': 'TDRD6', 'score': 10.56}, {'connected_gene': 'ENSG00000236164', 'score': 0.39}, {'connected_gene': 'GC06P046792', 'score': 0.37}]
chr6	GH06I046820	46820978	46823070	0.71	[{'connected_gene': 'PLA2G7', 'score': 10.47}, {'connected_gene': 'TDRD6', 'score': 10.15}, {'connected_gene': 'SLC25A27', 'score': 4.52}, {'connected_gene': 'GC06P046830', 'score': 0.44}, {'connected_gene': 'MEP1A', 'score': 0.31}]
chr6	GH06I046807	46807721	46809360	0.43	[{'connected_gene': 'PLA2G7', 'score': 10.61}, {'connected_gene': 'TDRD6', 'score': 9.87}, {'connected_gene': 'ADGRF5', 'score': 9.47}, {'connected_gene': 'SLC25A27', 'score': 6.62}, {'connected_gene': 'MEP1A', 'score': 4.77}, {'connected_gene': 'GC06P046792', 'score': 0.37}, {'connected_gene': 'GC06P046830', 'score': 0.34}]
chr6	GH06I046814	46814752	46817543	0.45	[{'connected_gene': 'PLA2G7', 'score': 10.56}, {'connected_gene': 'LOC101926962', 'score': 9.95}, {'connected_gene': 'SLC25A27', 'score': 7.18}, {'connected_gene': 'MEP1A', 'score': 6.46}, {'connected_gene': 'ADGRF4', 'score': 4.12}, {'connected_gene': 'GC06P046830', 'score': 0.39}]
chr6	GH06I046946	46946448	46950401	1.13	[{'connected_gene': 'MEP1A', 'score': 9.67}, {'connected_gene': 'PLA2G7', 'score': 9.46}, {'connected_gene': 'ADGRF5', 'score': 0.44}, {'connected_gene': 'LOC105375080', 'score': 0.37}]
chr6	GH06I046793	46793204	46793399	1.12	[{'connected_gene': 'MEP1A', 'score': 550.77}, {'connected_gene': 'GC06P046792', 'score': 550.77}]
chr6	GH06I046749	46749364	46750227	0.31	[{'connected_gene': 'TDRD6', 'score': 12.74}, {'connected_gene': 'MEP1A', 'score': 10.91}, {'connected_gene': 'CYP39A1', 'score': 5.27}, {'connected_gene': 'ANKRD66', 'score': 0.77}, {'connected_gene': 'ENSG00000236164', 'score': 0.39}, {'connected_gene': 'GC06P046731', 'score': 0.37}]
chr6	GH06I046900	46900863	46904465	0.54	[{'connected_gene': 'LOC101926962', 'score': 550.77}, {'connected_gene': 'ADGRF5', 'score': 10.7}, {'connected_gene': 'MEP1A', 'score': 9.73}, {'connected_gene': 'SLC25A27', 'score': 6.22}, {'connected_gene': 'GC06P046865', 'score': 0.28}]
chr6	GH06I046904	46904649	46905243	0.2	[{'connected_gene': 'LOC101926962', 'score': 550.77}, {'connected_gene': 'ADGRF5', 'score': 10.56}, {'connected_gene': 'MEP1A', 'score': 9.8}, {'connected_gene': 'LOC105375080', 'score': 0.31}]
chr6	GH06I046746	46746884	46746943	0.5	[{'connected_gene': 'ANKRD66', 'score': 550.77}, {'connected_gene': 'MEP1A', 'score': 10.43}, {'connected_gene': 'PLA2G7', 'score': 0.39}, {'connected_gene': 'GC06P046731', 'score': 0.37}]