PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000505154	[[156680143, 156680295], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727942]]	[[156698701, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727561]]
ENST00000502959	[[156680172, 156680295], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156706415, 156706481], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727770]]	[[156680292, 156680295], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156706415, 156706481], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727561]]
ENST00000505764	[[156680177, 156680295], [156680938, 156681012], [156693753, 156693905], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727890]]	[[156693888, 156693905], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727561]]
ENST00000507146	[[156680182, 156680295], [156680507, 156680693], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723364, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727985]]	[[156698701, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723364, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727561]]
ENST00000264424	[[156680210, 156680295], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156728743]]	[[156680292, 156680295], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727561]]
ENST00000503520	[[156680241, 156680295], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723592, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727700]]	[[156680292, 156680295], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723592, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727561]]
ENST00000513437	[[156680610, 156680693], [156680938, 156681012], [156696119, 156696220], [156698675, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727976]]	[[156698701, 156698794], [156710865, 156711063], [156715007, 156715238], [156716492, 156716609], [156717528, 156717662], [156721028, 156721226], [156723493, 156723731], [156724775, 156724916], [156725744, 156725899], [156726254, 156726381], [156727537, 156727561]]

Promoter

Chrom	Start	End	Description
chr4	156680143	156680152	CAGE_peak_2_at_GUCY1B3_5end
chr4	156680153	156680242	CAGE_peak_1_at_GUCY1B3_5end
chr4	156680518	156680529	CAGE_peak_3_at_GUCY1B3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I155806	155806649	155807748	0.31	[{'connected_gene': 'TDO2', 'score': 10.27}, {'connected_gene': 'GUCY1B1', 'score': 10.1}, {'connected_gene': 'GC04M155710', 'score': 0.77}]
chr4	GH04I155525	155525989	155527435	0.58	[{'connected_gene': 'GUCY1B1', 'score': 10.8}, {'connected_gene': 'GUCY1A1', 'score': 8.09}, {'connected_gene': 'LOC105377504', 'score': 0.77}]
chr4	GH04I155628	155628542	155630364	0.69	[{'connected_gene': 'GUCY1B1', 'score': 10.66}, {'connected_gene': 'GUCY1A1', 'score': 7.67}, {'connected_gene': 'LOC105377504', 'score': 0.14}]
chr4	GH04I155683	155683479	155685502	0.54	[{'connected_gene': 'GUCY1B1', 'score': 11.43}, {'connected_gene': 'GUCY1A1', 'score': 0.37}, {'connected_gene': 'ENSG00000260244', 'score': 0.25}]
chr4	GH04I155675	155675582	155677051	1.25	[{'connected_gene': 'GUCY1B1', 'score': 11.22}, {'connected_gene': 'GUCY1A1', 'score': 0.44}, {'connected_gene': 'ENSG00000260244', 'score': 0.22}]
chr4	GH04I155679	155679325	155682755	0.72	[{'connected_gene': 'GUCY1B1', 'score': 11.42}, {'connected_gene': 'GUCY1A1', 'score': 0.39}, {'connected_gene': 'ENSG00000260244', 'score': 0.23}]
chr4	GH04I155757	155757990	155760774	1.88	[{'connected_gene': 'GUCY1B1', 'score': 555.63}, {'connected_gene': 'LOC105377506', 'score': 550.77}, {'connected_gene': 'GC04M155710', 'score': 0.23}]
chr4	GH04I155543	155543198	155543670	0.31	[{'connected_gene': 'GUCY1B1', 'score': 10.87}, {'connected_gene': 'LOC105377504', 'score': 0.34}, {'connected_gene': 'GUCY1A1', 'score': 0.13}]
chr4	GH04I155777	155777784	155779310	0.57	[{'connected_gene': 'GUCY1B1', 'score': 0.37}, {'connected_gene': 'GC04M155710', 'score': 0.29}]
chr4	GH04I155591	155591855	155593418	0.38	[{'connected_gene': 'GUCY1A1', 'score': 11.32}, {'connected_gene': 'GUCY1B1', 'score': 10.21}, {'connected_gene': 'LOC105377504', 'score': 0.2}]
chr4	GH04I155693	155693210	155693899	0.2	[{'connected_gene': 'GUCY1A1', 'score': 13.02}, {'connected_gene': 'GUCY1B1', 'score': 10.42}, {'connected_gene': 'ENSG00000260244', 'score': 0.26}]