Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000371561 [[140032841, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140061862, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140061862, 140061979]]
ENST00000315048 [[140032841, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140062225, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140062225, 140062294]]
ENST00000471122 [[140033626, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051331, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140059874]] None
ENST00000350902 [[140033861, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140059874]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058497]]
ENST00000371553 [[140033932, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140062225, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140062225, 140062294]]
ENST00000371546 [[140033932, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140061862, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140061862, 140061979]]
ENST00000371559 [[140033932, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140062294]]
ENST00000371555 [[140033932, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140061862, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140061862, 140061979]]
ENST00000371550 [[140033932, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140061862, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140061862, 140061979]]
ENST00000371560 [[140033932, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140063207]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140062294]]
ENST00000485413 [[140051427, 140051489], [140052830, 140053169]] None
ENST00000460273 [[140057157, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058590]] None
ENST00000473811 [[140059568, 140059748], [140061862, 140061986]] None
ENST00000462584 [[140062374, 140062466], [140062914, 140063207]] None
NM_000832 [[140033608, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140063214]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140062294]]
NM_021569 [[140033608, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140061862, 140063214]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140061862, 140061979]]
NM_007327 [[140033608, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140061862, 140063214]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140061862, 140061979]]
NM_001185091 [[140033608, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140063214]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140062225, 140062294]]
NM_001185090 [[140033608, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140062225, 140063214]] [[140033938, 140034196], [140036464, 140036599], [140040177, 140040354], [140042603, 140042666], [140043460, 140043561], [140051120, 140051242], [140051314, 140051489], [140052830, 140052975], [140053072, 140053156], [140055507, 140055649], [140055740, 140055868], [140056375, 140056540], [140056623, 140056742], [140056855, 140056968], [140057042, 140057191], [140057297, 140057455], [140057620, 140057782], [140058010, 140058120], [140058210, 140058356], [140059637, 140059748], [140062225, 140062294]]
Promoter
Chrom Start End Description
chr9 140033470 140033494 CAGE_peak_3_at_GRIN1_5end
chr9 140033563 140033579 CAGE_peak_2_at_GRIN1_5end
chr9 140033591 140033614 CAGE_peak_1_at_GRIN1_5end
chr9 140036455 140036517 CAGE_peak_4_at_GRIN1_5end
chr9 140036560 140036574 CAGE_peak_6_at_GRIN1_5end
chr9 140056862 140056877 CAGE_peak_8_at_GRIN1_5end