PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000355295	[[100174231, 100174520], [100190741, 100190954], [100193214, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258407]]	[[100190747, 100190954], [100193214, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258165]]
ENST00000422139	[[100174375, 100174520], [100193214, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258403]]	[[100193229, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258165]]
ENST00000540902	[[100230676, 100230898], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258249]]	[[100235782, 100235908], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258165]]
ENST00000492428	[[100242623, 100243220], [100245130, 100245228]]	None
NM_001302884	[[100174301, 100174520], [100193214, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258407]]	[[100193229, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258165]]
NM_014290	[[100174301, 100174520], [100190741, 100190954], [100193214, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258407]]	[[100190747, 100190954], [100193214, 100193356], [100194306, 100194520], [100201526, 100201600], [100203939, 100204157], [100222459, 100223046], [100227123, 100227310], [100232839, 100232951], [100234574, 100234777], [100235773, 100235908], [100237664, 100237751], [100240720, 100240855], [100243109, 100243220], [100245130, 100245633], [100249453, 100249614], [100257944, 100258165]]

Promoter

Chrom	Start	End	Description
chr9	100174295	100174318	CAGE_peak_3_at_TDRD7_5end
chr9	100174344	100174474	CAGE_peak_1_at_TDRD7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I097404	97404407	97407730	1.13	[{'connected_gene': 'MFSD14C', 'score': 12.16}, {'connected_gene': 'LOC441454', 'score': 11.37}, {'connected_gene': 'TSTD2', 'score': 10.74}, {'connected_gene': 'ENSG00000203279', 'score': 5.71}, {'connected_gene': 'FAM220CP', 'score': 5.67}, {'connected_gene': 'VN1R51P', 'score': 3.99}, {'connected_gene': 'LOC286359', 'score': 0.44}, {'connected_gene': 'TDRD7', 'score': 0.44}, {'connected_gene': 'LOC105376167', 'score': 0.44}]
chr9	GH09I097522	97522828	97523931	0.2	[{'connected_gene': 'TMOD1', 'score': 11.77}, {'connected_gene': 'TDRD7', 'score': 10.26}, {'connected_gene': 'LOC105376168', 'score': 6.99}, {'connected_gene': 'PIR34153', 'score': 0.2}]
chr9	GH09I097520	97520197	97522445	0.31	[{'connected_gene': 'TMOD1', 'score': 11.77}, {'connected_gene': 'TDRD7', 'score': 10.26}, {'connected_gene': 'LOC105376168', 'score': 0.77}, {'connected_gene': 'PIR34153', 'score': 0.19}]
chr9	GH09I097468	97468239	97469853	0.79	[{'connected_gene': 'TMOD1', 'score': 11.58}, {'connected_gene': 'TDRD7', 'score': 11.05}]
chr9	GH09I097575	97575001	97576200	0.38	[{'connected_gene': 'TMOD1', 'score': 20.41}, {'connected_gene': 'LOC105376168', 'score': 12.07}, {'connected_gene': 'TDRD7', 'score': 10.18}, {'connected_gene': 'TRMO', 'score': 4.33}, {'connected_gene': 'PIR34153', 'score': 0.37}]
chr9	GH09I097524	97524620	97530389	1.22	[{'connected_gene': 'TMOD1', 'score': 11.74}, {'connected_gene': 'LOC105376168', 'score': 11.43}, {'connected_gene': 'TDRD7', 'score': 10.25}, {'connected_gene': 'ANKRD18CP', 'score': 5.84}, {'connected_gene': 'ENSG00000203279', 'score': 4.75}, {'connected_gene': 'AAED1', 'score': 4.63}, {'connected_gene': 'CCDC180', 'score': 4.21}, {'connected_gene': 'PIR34153', 'score': 0.2}]
chr9	GH09I097570	97570402	97572183	0.69	[{'connected_gene': 'TMOD1', 'score': 19.28}, {'connected_gene': 'LOC105376168', 'score': 12.08}, {'connected_gene': 'TDRD7', 'score': 10.19}, {'connected_gene': 'PIR34153', 'score': 0.34}]
chr9	GH09I097631	97631431	97635396	2.29	[{'connected_gene': 'NCBP1', 'score': 582.53}, {'connected_gene': 'TSTD2', 'score': 567.37}, {'connected_gene': 'MFSD14C', 'score': 22.19}, {'connected_gene': 'ZNF782', 'score': 21.82}, {'connected_gene': 'NUTM2G', 'score': 20.22}, {'connected_gene': 'ZNF322P1', 'score': 13.57}, {'connected_gene': 'ENSG00000224848', 'score': 12.63}, {'connected_gene': 'ZNF510', 'score': 12.18}, {'connected_gene': 'ENSG00000254633', 'score': 12.02}, {'connected_gene': 'XPA', 'score': 10.96}, {'connected_gene': 'LOC105376171', 'score': 10.79}, {'connected_gene': 'TDRD7', 'score': 10.74}, {'connected_gene': 'LOC441454', 'score': 10.57}, {'connected_gene': 'TMOD1', 'score': 9.21}, {'connected_gene': 'PIR37261', 'score': 0.31}, {'connected_gene': 'GC09P097607', 'score': 0.31}]
chr9	GH09I097435	97435994	97438568	0.42	[{'connected_gene': 'TDRD7', 'score': 11.41}, {'connected_gene': 'ENSG00000254633', 'score': 4.22}, {'connected_gene': 'TMOD1', 'score': 0.21}]
chr9	GH09I097418	97418426	97420108	0.76	[{'connected_gene': 'TDRD7', 'score': 0.44}, {'connected_gene': 'TMOD1', 'score': 0.18}]
chr9	GH09I097430	97430459	97430608	0.2	[{'connected_gene': 'TDRD7', 'score': 0.37}, {'connected_gene': 'TMOD1', 'score': 0.19}]
chr9	GH09I097411	97411382	97413708	2.03	[{'connected_gene': 'TDRD7', 'score': 550.77}, {'connected_gene': 'NCBP1', 'score': 22.38}, {'connected_gene': 'ZNF782', 'score': 20.3}, {'connected_gene': 'MFSD14C', 'score': 13.07}, {'connected_gene': 'NUTM2G', 'score': 10.76}, {'connected_gene': 'ZNF322P1', 'score': 9.71}, {'connected_gene': 'FAM220CP', 'score': 4.65}, {'connected_gene': 'CCDC180', 'score': 4.27}, {'connected_gene': 'TMOD1', 'score': 0.17}]
chr9	GH09I097050	97050977	97053978	0.86	[{'connected_gene': 'TDRD7', 'score': 9.52}, {'connected_gene': 'GAS2L1P2', 'score': 7.0}, {'connected_gene': 'PIR34542', 'score': 0.77}, {'connected_gene': 'CTSV', 'score': 0.39}]
chr9	GH09I097388	97388406	97389368	0.9	[{'connected_gene': 'TDRD7', 'score': 2.01}, {'connected_gene': 'LOC286359', 'score': 0.44}, {'connected_gene': 'LOC105376167', 'score': 0.44}, {'connected_gene': 'MIR1302-8', 'score': 0.31}]
chr9	GH09I097540	97540031	97540706	0.31	[{'connected_gene': 'TDRD7', 'score': 9.78}, {'connected_gene': 'LOC105376168', 'score': 0.34}, {'connected_gene': 'TMOD1', 'score': 0.28}, {'connected_gene': 'PIR34153', 'score': 0.23}]
chr9	GH09I097531	97531466	97532519	0.58	[{'connected_gene': 'TDRD7', 'score': 10.18}, {'connected_gene': 'LOC105376168', 'score': 0.39}, {'connected_gene': 'TMOD1', 'score': 0.29}, {'connected_gene': 'PIR34153', 'score': 0.21}]
chr9	GH09I097615	97615599	97615768	0.62	[{'connected_gene': 'TDRD7', 'score': 11.2}, {'connected_gene': 'LOC105376168', 'score': 10.95}, {'connected_gene': 'PIR37261', 'score': 0.44}, {'connected_gene': 'GC09P097607', 'score': 0.44}, {'connected_gene': 'TSTD2', 'score': 0.37}, {'connected_gene': 'NCBP1', 'score': 0.37}]
chr9	GH09I097533	97533409	97534096	0.31	[{'connected_gene': 'TDRD7', 'score': 10.18}, {'connected_gene': 'LOC105376168', 'score': 8.91}, {'connected_gene': 'ANKRD18CP', 'score': 5.07}, {'connected_gene': 'TMOD1', 'score': 0.29}, {'connected_gene': 'PIR34153', 'score': 0.22}]
chr9	GH09I097534	97534792	97536883	0.4	[{'connected_gene': 'TDRD7', 'score': 9.78}, {'connected_gene': 'LOC105376168', 'score': 8.89}, {'connected_gene': 'ANKRD18CP', 'score': 5.99}, {'connected_gene': 'TMOD1', 'score': 0.29}, {'connected_gene': 'PIR34153', 'score': 0.22}]
chr9	GH09I097537	97537011	97537719	0.38	[{'connected_gene': 'TDRD7', 'score': 9.78}, {'connected_gene': 'LOC105376168', 'score': 8.86}, {'connected_gene': 'ANKRD18CP', 'score': 6.19}, {'connected_gene': 'ENSG00000203279', 'score': 4.09}, {'connected_gene': 'TMOD1', 'score': 0.28}, {'connected_gene': 'PIR34153', 'score': 0.22}]
chr9	GH09I097766	97766199	97766348	0.2	[{'connected_gene': 'TDRD7', 'score': 8.83}, {'connected_gene': 'ENSG00000260677', 'score': 0.34}, {'connected_gene': 'PTCSC2', 'score': 0.17}]
chr9	GH09I097012	97012000	97014400	1.87	[{'connected_gene': 'ZNF782', 'score': 550.77}, {'connected_gene': 'MFSD14C', 'score': 550.77}, {'connected_gene': 'CTSV', 'score': 13.18}, {'connected_gene': 'AAED1', 'score': 3.4}, {'connected_gene': 'TDRD7', 'score': 2.07}, {'connected_gene': 'YRDCP2', 'score': 0.22}]
chr9	GH09I097505	97505920	97509445	0.66	[{'connected_gene': 'LOC105376168', 'score': 13.41}, {'connected_gene': 'TDRD7', 'score': 10.3}, {'connected_gene': 'TMOD1', 'score': 0.44}]
chr9	GH09I097380	97380991	97383474	1.02	[{'connected_gene': 'CCDC180', 'score': 35.88}, {'connected_gene': 'TDRD7', 'score': 11.53}, {'connected_gene': 'VN1R51P', 'score': 8.46}, {'connected_gene': 'LOC105376167', 'score': 0.39}, {'connected_gene': 'MIR1302-8', 'score': 0.37}]
chr9	GH09I096859	96859360	96860502	0.63	[{'connected_gene': 'CCDC180', 'score': 14.9}, {'connected_gene': 'ZNF510', 'score': 14.15}, {'connected_gene': 'ZNF322P1', 'score': 10.87}, {'connected_gene': 'TDRD7', 'score': 10.18}, {'connected_gene': 'ENSG00000224848', 'score': 10.01}, {'connected_gene': 'NUTM2G', 'score': 4.85}, {'connected_gene': 'LOC100132781', 'score': 0.44}, {'connected_gene': 'ZNF782', 'score': 0.1}]
chr9	GH09I096866	96866654	96867923	0.49	[{'connected_gene': 'LOC100132781', 'score': 550.77}, {'connected_gene': 'TDRD7', 'score': 9.33}, {'connected_gene': 'ZNF510', 'score': 0.17}, {'connected_gene': 'ZNF782', 'score': 0.11}]
chr9	GH09I096868	96868859	96869008	0.64	[{'connected_gene': 'LOC100132781', 'score': 550.77}, {'connected_gene': 'TDRD7', 'score': 9.33}, {'connected_gene': 'PIR60717', 'score': 0.31}, {'connected_gene': 'ZNF782', 'score': 0.11}]
chr9	GH09I097593	97593370	97595070	0.43	[{'connected_gene': 'PIR34153', 'score': 550.77}, {'connected_gene': 'TMOD1', 'score': 11.84}, {'connected_gene': 'LOC105376168', 'score': 11.45}, {'connected_gene': 'TDRD7', 'score': 10.59}, {'connected_gene': 'PIR41890', 'score': 0.44}]
chr9	GH09I097399	97399400	97399600	0.8	[{'connected_gene': 'ENSG00000203279', 'score': 10.74}, {'connected_gene': 'LOC286359', 'score': 0.77}, {'connected_gene': 'LOC105376167', 'score': 0.77}, {'connected_gene': 'TDRD7', 'score': 0.39}]
chr9	GH09I097400	97399000	97399388	1.04	[{'connected_gene': 'ENSG00000203279', 'score': 10.96}, {'connected_gene': 'LOC286359', 'score': 0.77}, {'connected_gene': 'LOC105376167', 'score': 0.77}, {'connected_gene': 'TDRD7', 'score': 0.39}]
chr9	GH09I097424	97424975	97426415	0.31	[{'connected_gene': 'ENSG00000254633', 'score': 4.24}, {'connected_gene': 'TDRD7', 'score': 0.39}, {'connected_gene': 'TMOD1', 'score': 0.18}]
chr9	GH09I096856	96856235	96859261	1.17	[{'connected_gene': 'ENSG00000224848', 'score': 16.71}, {'connected_gene': 'TDRD7', 'score': 10.98}, {'connected_gene': 'LOC100132781', 'score': 0.39}, {'connected_gene': 'ZNF510', 'score': 0.18}, {'connected_gene': 'ZNF782', 'score': 0.1}]