PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000359019	[[77157367, 77158109], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77214837, 77214867]]	[[77158062, 77158109], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77214837, 77214867]]
ENST00000334822	[[77157367, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220830], [77222169, 77222272], [77235763, 77235886], [77236698, 77236761], [77239488, 77239582], [77240375, 77240459], [77242012, 77242170], [77243155, 77243250], [77244626, 77247474]]	[[77158016, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220830], [77222169, 77222272], [77235763, 77235886], [77236698, 77236761], [77239488, 77239582], [77240375, 77240459], [77242012, 77242170], [77243155, 77243250], [77244626, 77244765]]
ENST00000426126	[[77157367, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220830], [77222169, 77222270], [77235761, 77235886], [77236698, 77236761], [77239488, 77239582], [77240375, 77240459], [77242012, 77242170], [77243155, 77243250], [77244626, 77247476]]	[[77158016, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220830], [77222169, 77222270], [77235761, 77235886], [77236698, 77236761], [77239488, 77239582], [77240375, 77240459], [77242012, 77242170], [77243155, 77243250], [77244626, 77244765]]
ENST00000546778	[[77157882, 77158109], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77214837, 77214947], [77216185, 77216311], [77220687, 77220796]]	[[77158016, 77158109], [77199096, 77199111]]
ENST00000552453	[[77158023, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209677, 77209799], [77216185, 77216311], [77220687, 77220694]]	[[77158023, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209677, 77209681]]
ENST00000547620	[[77158032, 77158109], [77175408, 77175463], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203622]]	[[77158032, 77158109], [77175408, 77175463], [77191213, 77191215]]
ENST00000550876	[[77158033, 77158109], [77175404, 77175463], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220762]]	[[77175409, 77175463], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220762]]
ENST00000551407	[[77158037, 77158109], [77162852, 77162981], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203530]]	[[77158037, 77158109], [77162852, 77162888]]
ENST00000547604	[[77158037, 77158109], [77199096, 77199219], [77203492, 77203573]]	[[77158037, 77158109], [77199096, 77199111]]
ENST00000550163	[[77158077, 77158109], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77216185, 77216309]]	[[77158077, 77158109], [77199096, 77199209]]
ENST00000549682	[[77158352, 77158592], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203543]]	[[77158568, 77158592], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203543]]
ENST00000549944	[[77191298, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77207092, 77207229], [77208925, 77208990], [77209636, 77209799], [77216185, 77216270]]	[[77191298, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77207092, 77207194]]
ENST00000549010	[[77233838, 77234263], [77235804, 77235870]]	None
ENST00000550789	[[77234170, 77234263], [77234744, 77234886], [77235804, 77235886], [77236698, 77236761], [77239488, 77239582], [77240375, 77240459], [77242012, 77242140]]	None
ENST00000552693	[[77237693, 77239582], [77240375, 77240459], [77242012, 77242117]]	None
ENST00000553091	[[77238654, 77238727], [77239488, 77239582], [77240375, 77240459], [77242012, 77242170], [77243155, 77243246]]	None
ENST00000550244	[[77240070, 77240459], [77242012, 77242170], [77243155, 77243250], [77244626, 77245172]]	None
ENST00000547673	[[77242017, 77242170], [77243155, 77243449]]	None
NM_015336	[[77157853, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220830], [77222169, 77222270], [77235761, 77235886], [77236698, 77236761], [77239488, 77239582], [77240375, 77240459], [77242012, 77242170], [77243155, 77243250], [77244626, 77247474]]	[[77158016, 77158109], [77191213, 77191317], [77199096, 77199219], [77202822, 77202900], [77203492, 77203637], [77208925, 77208990], [77209636, 77209799], [77216185, 77216311], [77220687, 77220830], [77222169, 77222270], [77235761, 77235886], [77236698, 77236761], [77239488, 77239582], [77240375, 77240459], [77242012, 77242170], [77243155, 77243250], [77244626, 77244765]]

Promoter

Chrom	Start	End	Description
chr12	77157772	77157775	CAGE_peak_5_at_ZDHHC17_5end
chr12	77157889	77157900	CAGE_peak_2_at_ZDHHC17_5end
chr12	77158021	77158045	CAGE_peak_1_at_ZDHHC17_5end
chr12	77158059	77158070	CAGE_peak_3_at_ZDHHC17_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I076860	76860208	76860761	0.2	[{'connected_gene': 'ZDHHC17', 'score': 5.82}, {'connected_gene': 'CSRP2', 'score': 0.37}, {'connected_gene': 'ENSG00000257910', 'score': 0.37}]
chr12	GH12I076857	76857303	76857691	0.22	[{'connected_gene': 'ZDHHC17', 'score': 10.29}, {'connected_gene': 'CSRP2', 'score': 4.54}, {'connected_gene': 'ENSG00000257910', 'score': 0.34}]
chr12	GH12I076862	76862723	76867941	0.66	[{'connected_gene': 'ZDHHC17', 'score': 6.36}, {'connected_gene': 'CSRP2', 'score': 4.6}, {'connected_gene': 'ENSG00000257910', 'score': 0.39}]
chr12	GH12I076687	76687120	76689045	0.63	[{'connected_gene': 'ZDHHC17', 'score': 10.52}, {'connected_gene': 'OSBPL8', 'score': 5.34}, {'connected_gene': 'LOC105369851', 'score': 0.34}, {'connected_gene': 'PIR46759', 'score': 0.31}]
chr12	GH12I076685	76685186	76685755	0.51	[{'connected_gene': 'ZDHHC17', 'score': 11.16}, {'connected_gene': 'OSBPL8', 'score': 4.74}, {'connected_gene': 'LOC105369851', 'score': 0.34}, {'connected_gene': 'PIR46759', 'score': 0.31}]
chr12	GH12I076518	76518801	76519010	0.43	[{'connected_gene': 'ZDHHC17', 'score': 9.82}, {'connected_gene': 'GC12P076505', 'score': 0.39}, {'connected_gene': 'GC12M076540', 'score': 0.34}, {'connected_gene': 'OSBPL8', 'score': 0.26}]
chr12	GH12I076703	76703559	76704884	0.43	[{'connected_gene': 'ZDHHC17', 'score': 10.99}, {'connected_gene': 'PIR46759', 'score': 0.39}, {'connected_gene': 'LOC105369851', 'score': 0.28}]
chr12	GH12I075857	75857900	75860802	0.38	[{'connected_gene': 'ZDHHC17', 'score': 4.41}, {'connected_gene': 'ENSG00000258091', 'score': 0.2}, {'connected_gene': 'LOC105369846', 'score': 0.18}, {'connected_gene': 'ENSG00000258077', 'score': 0.13}]
chr12	GH12I076637	76637861	76638010	0.31	[{'connected_gene': 'ZDHHC17', 'score': 10.45}, {'connected_gene': 'GC12P076641', 'score': 0.77}, {'connected_gene': 'YWHAQP7', 'score': 0.37}, {'connected_gene': 'LOC105369851', 'score': 0.31}]
chr12	GH12I076777	76777126	76778650	1.05	[{'connected_gene': 'ZDHHC17', 'score': 6.45}, {'connected_gene': 'ENSG00000257910', 'score': 0.15}]
chr12	GH12I076781	76781124	76786407	0.97	[{'connected_gene': 'ZDHHC17', 'score': 12.14}, {'connected_gene': 'ENSG00000257910', 'score': 0.16}]
chr12	GH12I076767	76767401	76768000	0.38	[{'connected_gene': 'ZDHHC17', 'score': 0.77}, {'connected_gene': 'ENSG00000257910', 'score': 0.14}]
chr12	GH12I076787	76787101	76787250	0.71	[{'connected_gene': 'ZDHHC17', 'score': 12.14}, {'connected_gene': 'ENSG00000257910', 'score': 0.16}]
chr12	GH12I076791	76791081	76791230	0.63	[{'connected_gene': 'ZDHHC17', 'score': 11.91}, {'connected_gene': 'ENSG00000257910', 'score': 0.17}]
chr12	GH12I076809	76809991	76811646	0.2	[{'connected_gene': 'ZDHHC17', 'score': 6.3}, {'connected_gene': 'ENSG00000257910', 'score': 0.2}]
chr12	GH12I076766	76766801	76767000	0.38	[{'connected_gene': 'ZDHHC17', 'score': 0.77}, {'connected_gene': 'ENSG00000257910', 'score': 0.14}]
chr12	GH12I076804	76804184	76805034	0.54	[{'connected_gene': 'ZDHHC17', 'score': 14.89}, {'connected_gene': 'ENSG00000257910', 'score': 0.19}]
chr12	GH12I076768	76768721	76768870	0.43	[{'connected_gene': 'ZDHHC17', 'score': 0.44}, {'connected_gene': 'ENSG00000257910', 'score': 0.14}]
chr12	GH12I076762	76762287	76765952	1.56	[{'connected_gene': 'ZDHHC17', 'score': 557.22}, {'connected_gene': 'ENSG00000257910', 'score': 0.14}]
chr12	GH12I076872	76872481	76872670	0.49	[{'connected_gene': 'CSRP2', 'score': 0.44}, {'connected_gene': 'ENSG00000257910', 'score': 0.44}, {'connected_gene': 'ZDHHC17', 'score': 0.14}]
chr12	GH12I076871	76871109	76871510	0.71	[{'connected_gene': 'CSRP2', 'score': 0.44}, {'connected_gene': 'ENSG00000257910', 'score': 0.44}, {'connected_gene': 'ZDHHC17', 'score': 0.14}]
chr12	GH12I076874	76874608	76874790	0.38	[{'connected_gene': 'CSRP2', 'score': 0.77}, {'connected_gene': 'ENSG00000257910', 'score': 0.77}, {'connected_gene': 'ZDHHC17', 'score': 0.14}]
chr12	GH12I076526	76526068	76526496	0.39	[{'connected_gene': 'OSBPL8', 'score': 9.16}, {'connected_gene': 'ZDHHC17', 'score': 3.11}, {'connected_gene': 'GC12M076540', 'score': 0.39}, {'connected_gene': 'GC12P076505', 'score': 0.34}]
chr12	GH12I076664	76664181	76667000	0.94	[{'connected_gene': 'LOC105369851', 'score': 550.77}, {'connected_gene': 'ZDHHC17', 'score': 11.21}, {'connected_gene': 'OSBPL8', 'score': 4.72}, {'connected_gene': 'PIR46759', 'score': 0.25}]
chr12	GH12I076144	76144201	76144400	0.78	[{'connected_gene': 'LOC100652897', 'score': 26.02}, {'connected_gene': 'KRR1', 'score': 16.53}, {'connected_gene': 'GLIPR1L1', 'score': 14.16}, {'connected_gene': 'CAPS2', 'score': 12.37}, {'connected_gene': 'ZDHHC17', 'score': 11.88}, {'connected_gene': 'BBS10', 'score': 11.21}, {'connected_gene': 'RPL21P98', 'score': 10.26}, {'connected_gene': 'GC12P076140', 'score': 0.77}, {'connected_gene': 'LINC02407', 'score': 0.13}]
chr12	GH12I076569	76569819	76570022	0.46	[{'connected_gene': 'GC12P076571', 'score': 550.77}, {'connected_gene': 'OSBPL8', 'score': 8.1}, {'connected_gene': 'ZDHHC17', 'score': 1.54}, {'connected_gene': 'ENSG00000257526', 'score': 0.44}, {'connected_gene': 'LOC105369850', 'score': 0.39}]
chr12	GH12I076556	76556167	76556610	0.78	[{'connected_gene': 'GC12P076557', 'score': 550.77}, {'connected_gene': 'OSBPL8', 'score': 6.94}, {'connected_gene': 'ZDHHC17', 'score': 1.46}, {'connected_gene': 'GC12M076540', 'score': 0.37}]
chr12	GH12I076718	76718794	76721211	0.87	[{'connected_gene': 'GC12P076722', 'score': 550.77}, {'connected_gene': 'RPL7P43', 'score': 550.77}, {'connected_gene': 'ZDHHC17', 'score': 11.02}, {'connected_gene': 'PIR46759', 'score': 0.44}]