PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369158	[[149811109, 149812765]]	[[149812318, 149812729]]
NM_021059	[[149812258, 149812765]]	[[149812318, 149812729]]

Promoter

Chrom	Start	End	Description
chr1	149824160	149824183	CAGE_peak_1_at_HIST2H3A_5end,CAGE_peak_1_at_HIST2H3C_5end,CAGE_peak_1_at_HIST2H3D_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I149835	149835201	149835800	0.4	[{'connected_gene': 'HIST2H4A', 'score': 0.77}, {'connected_gene': 'HIST2H3C', 'score': 0.44}]
chr1	GH01I150061	150061386	150062280	0.79	[{'connected_gene': 'HIST2H2AC', 'score': 14.66}, {'connected_gene': 'OTUD7B', 'score': 11.24}, {'connected_gene': 'MTMR11', 'score': 11.2}, {'connected_gene': 'PLEKHO1', 'score': 11.04}, {'connected_gene': 'HIST2H2AA3', 'score': 10.32}, {'connected_gene': 'HIST2H2BD', 'score': 10.32}, {'connected_gene': 'SF3B4', 'score': 10.32}, {'connected_gene': 'HIST2H3C', 'score': 10.32}, {'connected_gene': 'HIST2H2BE', 'score': 10.05}, {'connected_gene': 'BOLA1', 'score': 10.05}, {'connected_gene': 'LOC105371427', 'score': 0.44}, {'connected_gene': 'LOC441907', 'score': 0.44}, {'connected_gene': 'GC01M150063', 'score': 0.44}]
chr1	GH01I149840	149840200	149846393	2	[{'connected_gene': 'HIST2H2AA3', 'score': 555.39}, {'connected_gene': 'HIST2H3C', 'score': 550.77}, {'connected_gene': 'GC01P149843', 'score': 550.77}, {'connected_gene': 'HIST2H2BD', 'score': 550.77}, {'connected_gene': 'SV2A', 'score': 20.53}, {'connected_gene': 'HIST2H2AC', 'score': 12.95}, {'connected_gene': 'HIST2H2BE', 'score': 12.95}, {'connected_gene': 'BOLA1', 'score': 12.95}, {'connected_gene': 'MTMR11', 'score': 9.57}, {'connected_gene': 'ENSG00000261716', 'score': 5.25}, {'connected_gene': 'ENSG00000272993', 'score': 0.77}]
chr1	GH01I149831	149831200	149834201	1.2	[{'connected_gene': 'GC01M149831', 'score': 550.77}, {'connected_gene': 'HIST2H4A', 'score': 550.77}, {'connected_gene': 'HIST2H3C', 'score': 0.44}]