PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000256319	[[76116133, 76117977], [76118113, 76118232], [76121228, 76121319], [76123712, 76123876], [76127117, 76127532]]	[[76117897, 76117977], [76118113, 76118232], [76121228, 76121319], [76123712, 76123845]]

Promoter

Chrom	Start	End	Description
chr14	76127139	76127150	CAGE_peak_2_at_C14orf1_5end
chr14	76127159	76127226	CAGE_peak_1_at_C14orf1_5end
chr14	76127422	76127461	CAGE_peak_4_at_C14orf1_5end
chr14	76127519	76127543	CAGE_peak_3_at_C14orf1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I075644	75644098	75651457	1.41	[{'connected_gene': 'FLVCR2', 'score': 32.95}, {'connected_gene': 'LOC102724153', 'score': 12.22}, {'connected_gene': 'TTLL5', 'score': 10.5}, {'connected_gene': 'BATF', 'score': 10.11}, {'connected_gene': 'IFT43', 'score': 8.93}, {'connected_gene': 'GC14M075659', 'score': 0.39}, {'connected_gene': 'ERG28', 'score': 0.39}]
chr14	GH14I075659	75659888	75662401	2.04	[{'connected_gene': 'TTLL5', 'score': 561.11}, {'connected_gene': 'ERG28', 'score': 550.77}, {'connected_gene': 'GC14M075659', 'score': 550.77}, {'connected_gene': 'FLVCR2', 'score': 24.62}, {'connected_gene': 'GPATCH2L', 'score': 22.84}, {'connected_gene': 'NEK9', 'score': 12.31}, {'connected_gene': 'FCF1', 'score': 11.69}, {'connected_gene': 'LOC102724153', 'score': 11.16}, {'connected_gene': 'YLPM1', 'score': 10.75}, {'connected_gene': 'MLH3', 'score': 10.17}, {'connected_gene': 'EIF2B2', 'score': 9.92}, {'connected_gene': 'GC14M075662', 'score': 0.77}]
chr14	GH14I075551	75551043	75551439	0.64	[{'connected_gene': 'BATF', 'score': 17.0}, {'connected_gene': 'FLVCR2', 'score': 12.29}, {'connected_gene': 'LOC102724153', 'score': 12.29}, {'connected_gene': 'TTLL5', 'score': 10.08}, {'connected_gene': 'ERG28', 'score': 1.9}, {'connected_gene': 'PIR35535', 'score': 0.44}]
chr14	GH14I075547	75547837	75548122	0.46	[{'connected_gene': 'BATF', 'score': 16.63}, {'connected_gene': 'FLVCR2', 'score': 11.15}, {'connected_gene': 'LOC102724153', 'score': 11.15}, {'connected_gene': 'JDP2', 'score': 10.26}, {'connected_gene': 'TTLL5', 'score': 9.89}, {'connected_gene': 'ERG28', 'score': 1.9}, {'connected_gene': 'PIR35535', 'score': 0.39}]
chr14	GH14I075497	75497338	75497595	0.9	[{'connected_gene': 'BATF', 'score': 25.49}, {'connected_gene': 'JDP2', 'score': 11.04}, {'connected_gene': 'ERG28', 'score': 1.39}, {'connected_gene': 'LOC105370572', 'score': 0.37}, {'connected_gene': 'LOC101928377', 'score': 0.2}]
chr14	GH14I075654	75654218	75654407	0.77	[{'connected_gene': 'LOC102724153', 'score': 12.06}, {'connected_gene': 'FLVCR2', 'score': 12.05}, {'connected_gene': 'TTLL5', 'score': 11.5}, {'connected_gene': 'BATF', 'score': 10.1}, {'connected_gene': 'GC14M075659', 'score': 0.44}, {'connected_gene': 'ERG28', 'score': 0.44}]