PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000289371	[[99953815, 99954052], [99976698, 99976824], [99976927, 99977012], [99977610, 99978283], [99980107, 99980325], [99980733, 99980884], [99984955, 99985054], [99985854, 99985944], [99988118, 99988193], [99992809, 99993099], [99995481, 99995589], [99995780, 99995891], [99998621, 99998689], [99999242, 99999384], [100006180, 100006312], [100006681, 100006864], [100007006, 100007168], [100009429, 100009561], [100010729, 100010861], [100010971, 100011048], [100011181, 100011346], [100013222, 100013361], [100015210, 100015372], [100015769, 100017789]]	[[99954017, 99954052], [99976698, 99976824], [99976927, 99977012], [99977610, 99978283], [99980107, 99980325], [99980733, 99980884], [99984955, 99985054], [99985854, 99985944], [99988118, 99988193], [99992809, 99993099], [99995481, 99995589], [99995780, 99995891], [99998621, 99998689], [99999242, 99999384], [100006180, 100006312], [100006681, 100006864], [100007006, 100007168], [100009429, 100009561], [100010729, 100010861], [100010971, 100011048], [100011181, 100011346], [100013222, 100013361], [100015210, 100015372], [100015769, 100015877]]
ENST00000470868	[[100006069, 100006312], [100006681, 100006864], [100007006, 100007153]]	None
ENST00000494190	[[100011271, 100011346], [100013222, 100013361], [100015210, 100015660]]	None
ENST00000470023	[[100013509, 100015372], [100015769, 100016237]]	None
NM_015904	[[99953833, 99954052], [99976698, 99976824], [99976927, 99977012], [99977610, 99978283], [99980107, 99980325], [99980733, 99980884], [99984955, 99985054], [99985854, 99985944], [99988118, 99988193], [99992809, 99993099], [99995481, 99995589], [99995780, 99995891], [99998621, 99998689], [99999242, 99999384], [100006180, 100006312], [100006681, 100006864], [100007006, 100007168], [100009429, 100009561], [100010729, 100010861], [100010971, 100011048], [100011181, 100011346], [100013222, 100013361], [100015210, 100015372], [100015769, 100016728]]	[[99954017, 99954052], [99976698, 99976824], [99976927, 99977012], [99977610, 99978283], [99980107, 99980325], [99980733, 99980884], [99984955, 99985054], [99985854, 99985944], [99988118, 99988193], [99992809, 99993099], [99995481, 99995589], [99995780, 99995891], [99998621, 99998689], [99999242, 99999384], [100006180, 100006312], [100006681, 100006864], [100007006, 100007168], [100009429, 100009561], [100010729, 100010861], [100010971, 100011048], [100011181, 100011346], [100013222, 100013361], [100015210, 100015372], [100015769, 100015877]]

Promoter

Chrom	Start	End	Description
chr2	99953827	99953894	CAGE_peak_1_at_EIF5B_5end
chr2	99953983	99954001	CAGE_peak_2_at_EIF5B_5end
chr2	99977665	99977695	CAGE_peak_3_at_EIF5B_5end
chr2	99977750	99977764	CAGE_peak_7_at_EIF5B_5end
chr2	99977767	99977790	CAGE_peak_6_at_EIF5B_5end
chr2	99977910	99977931	CAGE_peak_8_at_EIF5B_5end
chr2	99977985	99978027	CAGE_peak_4_at_EIF5B_5end
chr2	99978029	99978057	CAGE_peak_11_at_EIF5B_5end
chr2	99978119	99978130	CAGE_peak_16_at_EIF5B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I099856	99856860	99858363	0.46	[{'connected_gene': 'EIF5B', 'score': 5.05}, {'connected_gene': 'GC02P099881', 'score': 0.34}, {'connected_gene': 'LOC105373504', 'score': 0.1}, {'connected_gene': 'AFF3', 'score': 0.06}]
chr2	GH02I099323	99323688	99325091	0.31	[{'connected_gene': 'TSGA10', 'score': 25.72}, {'connected_gene': 'REV1', 'score': 15.67}, {'connected_gene': 'ENSG00000241962', 'score': 12.08}, {'connected_gene': 'MITD1', 'score': 11.49}, {'connected_gene': 'MRPL30', 'score': 11.49}, {'connected_gene': 'LIPT1', 'score': 10.01}, {'connected_gene': 'LYG1', 'score': 8.95}, {'connected_gene': 'PIR33754', 'score': 0.44}, {'connected_gene': 'EIF5B', 'score': 0.39}, {'connected_gene': 'TXNDC9', 'score': 0.37}]
chr2	GH02I099388	99388977	99390435	0.31	[{'connected_gene': 'TSGA10', 'score': 15.41}, {'connected_gene': 'LYG1', 'score': 13.78}, {'connected_gene': 'TXNDC9', 'score': 11.47}, {'connected_gene': 'EIF5B', 'score': 11.46}, {'connected_gene': 'REV1', 'score': 10.65}, {'connected_gene': 'ENSG00000273306', 'score': 0.37}]
chr2	GH02I099430	99430539	99431947	0.52	[{'connected_gene': 'TSGA10', 'score': 24.39}, {'connected_gene': 'TXNDC9', 'score': 11.23}, {'connected_gene': 'EIF5B', 'score': 11.23}, {'connected_gene': 'REV1', 'score': 11.05}, {'connected_gene': 'MRPL30', 'score': 9.8}, {'connected_gene': 'LIPT1', 'score': 9.79}, {'connected_gene': 'LYG1', 'score': 9.75}, {'connected_gene': 'ENSG00000273306', 'score': 0.31}]
chr2	GH02I099398	99398917	99399459	0.52	[{'connected_gene': 'REV1', 'score': 10.71}, {'connected_gene': 'ENSG00000273306', 'score': 0.44}, {'connected_gene': 'TXNDC9', 'score': 0.22}, {'connected_gene': 'EIF5B', 'score': 0.21}]
chr2	GH02I099334	99334998	99338930	2.11	[{'connected_gene': 'TXNDC9', 'score': 550.77}, {'connected_gene': 'EIF5B', 'score': 550.77}, {'connected_gene': 'LOC550644', 'score': 23.76}, {'connected_gene': 'TSGA10', 'score': 15.84}, {'connected_gene': 'REV1', 'score': 14.81}, {'connected_gene': 'ENSG00000273306', 'score': 12.29}, {'connected_gene': 'UNC50', 'score': 11.68}, {'connected_gene': 'MITD1', 'score': 10.31}, {'connected_gene': 'LYG1', 'score': 9.45}, {'connected_gene': 'PIR33754', 'score': 0.37}]
chr2	GH02I099400	99400935	99401231	0.63	[{'connected_gene': 'ENSG00000273306', 'score': 0.77}, {'connected_gene': 'TXNDC9', 'score': 0.21}, {'connected_gene': 'EIF5B', 'score': 0.21}, {'connected_gene': 'REV1', 'score': 0.17}]