Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000332822 [[54671059, 54672951]] [[54671584, 54672283]]
NM_005450 [[54671059, 54672951]] [[54671584, 54672283]]
Promoter
Chrom Start End Description
chr17 54671047 54671075 CAGE_peak_1_at_NOG_5end
chr17 54671184 54671198 CAGE_peak_2_at_NOG_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr17 GH17I056592 56592600 56599054 2.01 [{'connected_gene': 'NOG', 'score': 550.77}, {'connected_gene': 'COIL', 'score': 21.53}, {'connected_gene': 'ENSG00000262298', 'score': 14.05}, {'connected_gene': 'DGKE', 'score': 13.43}, {'connected_gene': 'MSI2', 'score': 10.44}, {'connected_gene': 'GC17M056599', 'score': 0.77}]
chr17 GH17I056777 56777978 56778161 0.24 [{'connected_gene': 'NOG', 'score': 11.07}, {'connected_gene': 'TRIM25', 'score': 6.43}, {'connected_gene': 'SCPEP1', 'score': 4.26}, {'connected_gene': 'GC17M056765', 'score': 0.44}, {'connected_gene': 'GC17M056800', 'score': 0.34}, {'connected_gene': 'GC17M056657', 'score': 0.15}]
chr17 GH17I056754 56754121 56757307 0.99 [{'connected_gene': 'NOG', 'score': 11.09}, {'connected_gene': 'RNF126P1', 'score': 5.83}, {'connected_gene': 'GC17M056765', 'score': 0.39}, {'connected_gene': 'GC17M056726', 'score': 0.34}, {'connected_gene': 'GC17M056657', 'score': 0.13}]
chr17 GH17I056779 56779124 56782145 1.37 [{'connected_gene': 'NOG', 'score': 11.06}, {'connected_gene': 'C17orf67', 'score': 6.53}, {'connected_gene': 'GC17M056765', 'score': 0.39}, {'connected_gene': 'GC17M056800', 'score': 0.34}, {'connected_gene': 'GC17M056657', 'score': 0.15}]
chr17 GH17I056697 56697390 56700637 1.07 [{'connected_gene': 'NOG', 'score': 10.59}, {'connected_gene': 'GC17M056726', 'score': 0.29}, {'connected_gene': 'GC17P056602', 'score': 0.15}, {'connected_gene': 'GC17M056657', 'score': 0.1}]
chr17 GH17I056629 56629900 56630069 0.56 [{'connected_gene': 'NOG', 'score': 12.37}, {'connected_gene': 'GC17P056602', 'score': 0.31}, {'connected_gene': 'GC17M056726', 'score': 0.15}]
chr17 GH17I056715 56715980 56716149 0.67 [{'connected_gene': 'NOG', 'score': 11.75}, {'connected_gene': 'GC17M056726', 'score': 0.37}, {'connected_gene': 'GC17P056602', 'score': 0.14}, {'connected_gene': 'GC17M056657', 'score': 0.1}]
chr17 GH17I056707 56707174 56709116 0.74 [{'connected_gene': 'NOG', 'score': 5.02}, {'connected_gene': 'GC17M056726', 'score': 0.34}, {'connected_gene': 'GC17P056602', 'score': 0.14}, {'connected_gene': 'GC17M056657', 'score': 0.1}]
chr17 GH17I056654 56654020 56654189 0.57 [{'connected_gene': 'NOG', 'score': 12.44}, {'connected_gene': 'GC17P056602', 'score': 0.23}, {'connected_gene': 'GC17M056726', 'score': 0.18}]
chr17 GH17I056784 56784747 56788329 1.6 [{'connected_gene': 'C17orf67', 'score': 17.08}, {'connected_gene': 'NOG', 'score': 10.97}, {'connected_gene': 'TRIM25', 'score': 8.71}, {'connected_gene': 'SCPEP1', 'score': 6.4}, {'connected_gene': 'GC17M056800', 'score': 0.37}, {'connected_gene': 'GC17M056765', 'score': 0.37}, {'connected_gene': 'GC17M056657', 'score': 0.17}]
chr17 GH17I056577 56577657 56578238 0.52 [{'connected_gene': 'RPL39P33', 'score': 0.77}, {'connected_gene': 'NOG', 'score': 0.37}, {'connected_gene': 'GC17P056480', 'score': 0.15}]
chr17 GH17I056599 56599100 56599209 0.31 [{'connected_gene': 'GC17M056599', 'score': 550.77}, {'connected_gene': 'NOG', 'score': 0.44}]
chr17 GH17I056600 56599240 56599249 0.2 [{'connected_gene': 'GC17M056599', 'score': 550.77}, {'connected_gene': 'NOG', 'score': 0.44}]

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