PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000361228	[[86198330, 86199740], [86229932, 86230348]]	[[86198479, 86199740], [86229932, 86229979]]
NM_005447	[[86198330, 86199740], [86229932, 86230318]]	[[86198479, 86199740], [86229932, 86229979]]

Promoter

Chrom	Start	End	Description
chr12	86229978	86230027	CAGE_peak_2_at_RASSF9_5end
chr12	86230099	86230125	CAGE_peak_4_at_RASSF9_5end
chr12	86230126	86230146	CAGE_peak_3_at_RASSF9_5end
chr12	86230151	86230232	CAGE_peak_1_at_RASSF9_5end
chr12	86230233	86230254	CAGE_peak_5_at_RASSF9_5end
chr12	86230315	86230339	CAGE_peak_6_at_RASSF9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I085867	85867283	85867372	0.59	[{'connected_gene': 'RASSF9', 'score': 11.25}, {'connected_gene': 'NTS', 'score': 0.44}]
chr12	GH12I085625	85625533	85628101	0.95	[{'connected_gene': 'RASSF9', 'score': 14.4}, {'connected_gene': 'GC12M085624', 'score': 0.31}, {'connected_gene': 'LOC101059974', 'score': 0.22}]
chr12	GH12I085530	85530149	85531486	0.31	[{'connected_gene': 'RASSF9', 'score': 6.47}, {'connected_gene': 'LOC101059974', 'score': 0.28}, {'connected_gene': 'GC12M085361', 'score': 0.21}]
chr12	GH12I085549	85549008	85551672	0.49	[{'connected_gene': 'RASSF9', 'score': 5.26}, {'connected_gene': 'LOC101059974', 'score': 0.37}, {'connected_gene': 'GC12M085361', 'score': 0.18}]
chr12	GH12I085805	85805560	85806063	0.2	[{'connected_gene': 'RASSF9', 'score': 12.13}, {'connected_gene': 'LOC100129589', 'score': 0.34}]
chr12	GH12I085823	85823903	85824052	0.59	[{'connected_gene': 'RASSF9', 'score': 0.39}, {'connected_gene': 'LOC100129589', 'score': 0.26}]
chr12	GH12I085834	85834010	85837523	1.91	[{'connected_gene': 'RASSF9', 'score': 550.77}, {'connected_gene': 'ENSG00000258178', 'score': 4.66}, {'connected_gene': 'LOC100129589', 'score': 0.23}]
chr12	GH12I085758	85758594	85760176	0.38	[{'connected_gene': 'RASSF9', 'score': 11.48}, {'connected_gene': 'ENSG00000258178', 'score': 4.2}, {'connected_gene': 'GC12P085768', 'score': 0.44}, {'connected_gene': 'GC12P085686', 'score': 0.19}]
chr12	GH12I085764	85764352	85766686	0.74	[{'connected_gene': 'RASSF9', 'score': 11.01}, {'connected_gene': 'ENSG00000258178', 'score': 4.07}, {'connected_gene': 'GC12P085768', 'score': 0.77}, {'connected_gene': 'GC12P085686', 'score': 0.18}]
chr12	GH12I085843	85843684	85844559	0.43	[{'connected_gene': 'MGAT4C', 'score': 10.21}, {'connected_gene': 'RASSF9', 'score': 0.44}, {'connected_gene': 'NTS', 'score': 0.29}]
chr12	GH12I085804	85804503	85805400	0.63	[{'connected_gene': 'LOC100129589', 'score': 0.34}, {'connected_gene': 'RASSF9', 'score': 0.29}]
chr12	GH12I085468	85468243	85470285	1.02	[{'connected_gene': 'GC12M085361', 'score': 550.77}, {'connected_gene': 'RASSF9', 'score': 6.74}, {'connected_gene': 'LOC101059974', 'score': 0.15}]
chr12	GH12I085824	85823393	85823890	0.59	[{'connected_gene': 'ENSG00000258178', 'score': 4.52}, {'connected_gene': 'RASSF9', 'score': 0.39}, {'connected_gene': 'LOC100129589', 'score': 0.26}]
chr12	GH12I085820	85820634	85822389	0.78	[{'connected_gene': 'ENSG00000258178', 'score': 3.79}, {'connected_gene': 'RASSF9', 'score': 0.37}, {'connected_gene': 'LOC100129589', 'score': 0.28}]