PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
SUMO2	0	KDM1A	2	pull down	Ouyang J (2009)	1
JUN	0	MTA3	3	affinity chromatography technology	Aguilera C (2011)	1
NR2C1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
TRIM25	5	CHD4	22	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
ELAVL1	0	TP53	0	affinity chromatography technology	Galban S (2003)	1
VIM	0	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
ESR1	0	MNAT1	0	pull down, affinity chromatography technology	Talukder AH (2003), Talukder AH (2003)	2
DNMT3B	3	SUZ12	0	affinity chromatography technology	OHagan HM (2011)	1
UBE2I	0	EP300	36	enzymatic study, affinity chromatography technology	Girdwood D (2003), Bian XL (2017)	2
CHD4	22	CHD3	19	affinity chromatography technology, affinity chromatography technology, biochemical	Xue Y (1998), Xue Y (1998), Havugimana PC (2012)	3
RNF2	1	HDAC2	1	affinity chromatography technology	Cao Q (2014)	1
MTA1	3	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yan C (2003), Khaleque MA (2008), Xue Y (1998), Wan C (2015)	4
ZBTB46	7	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SUMO2	0	GATAD2B	15	pull down	Ouyang J (2009)	1
TRIM25	5	ZBTB46	7	affinity chromatography technology	Choudhury NR (2017)	1
NR2C1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
ZEB2	7	HDAC2	1	affinity chromatography technology	Verstappen G (2008)	1
PHF20L1	4	CHD4	22	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ZNF827	2	MTA3	3	affinity chromatography technology	Conomos D (2014)	1
GATAD2B	15	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
CHD4	22	GATAD2A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Rahman S (2011), Havugimana PC (2012), Huttlin EL (2017)	3
TXNIP	2	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
KDM1A	2	HIST2H3C	0	x-ray crystallography, enzymatic study	Lan F (2007), Shi Y (2004)	2
KDM1A	2	RBBP7	1	affinity chromatography technology	Li Q (2011)	1
MBD2	1	SIN3A	13	pull down, two hybrid	Boeke J (2000), Boeke J (2000)	2
ELAVL1	0	FOXP1	23	affinity chromatography technology	Abdelmohsen K (2009)	1
BCL11A	14	SIRT1	3	affinity chromatography technology, pull down	Senawong T (2005), Senawong T (2005)	2
HDAC2	1	ESR1	0	affinity chromatography technology, affinity chromatography technology	Itoh Y (2007), Tarallo R (2011)	2
ELAVL1	0	GATAD2A	3	affinity chromatography technology	Abdelmohsen K (2009)	1
HIST3H3	0	MTA1	3	unspecified method	Li X (2012)	1
KDM1A	2	MTA1	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Cui S (2011), Cui S (2011)	4
RBBP7	1	EED	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	5
KDM1A	2	CHD3	19	affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Li Q (2011)	2
HIC1	1	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Van Rechem C (2010), Dehennaut V (2013), Dehennaut V (2013)	3
BAG6	2	HIST2H3C	0	affinity chromatography technology, affinity chromatography technology	Wakeman TP (2012), Wakeman TP (2012)	2
HIC1	1	EED	1	affinity chromatography technology	Boulay G (2012)	1
NFATC2	1	MBD3	4	affinity chromatography technology	Gabriel CH (2016)	1
ZEB2	7	RBBP7	1	affinity chromatography technology	Verstappen G (2008)	1
PHF20L1	4	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SUZ12	0	GATAD2B	15	affinity chromatography technology	Cao Q (2014)	1
TP53	0	PARK7	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fan J (2008), Fan J (2008), Kim SJ (2012)	3
SOX2	4	RBBP7	1	affinity chromatography technology	Engelen E (2011)	1
HDAC1	4	ESR1	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Kawai H (2003), Kawai H (2003), Varshochi R (2005), Varshochi R (2005), Kurtev V (2004), Liu XF (2004), Itoh Y (2007), Tarallo R (2011), Yoshimaru T (2013)	9
ZNF219	3	MBD2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NR2C1	0	POLD3	0	affinity chromatography technology	Cui S (2011)	1
DNMT1	5	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Cui S (2011), Cui S (2011), Cai Y (2014), Cai Y (2014), Cai Y (2014), Cai Y (2014)	6
MBD2	1	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Godmann M (2007), Godmann M (2007)	2
MBD2	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Brackertz M (2002), Ng HH (1999), Ng HH (1999), Ng HH (1999), Zhang Y (1999), Zhang Y (1999), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Godmann M (2007), Bantscheff M (2011), Joshi P (2013), Fujita H (2003), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	16
PARK7	0	HDAC2	1	affinity chromatography technology	Opsahl JA (2010)	1
MTA2	1	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Zhang Y (1998), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Quan J (2014), Wan C (2015)	8
RNF2	1	RBBP4	3	affinity chromatography technology	Cao Q (2014)	1
NR2C2	0	EED	1	affinity chromatography technology	Hein MY (2015)	1
NFATC2	1	BCL11B	3	affinity chromatography technology	Gabriel CH (2016)	1
HDAC1	4	KPNA3	0	affinity chromatography technology	Joshi P (2013)	1
MDM2	2	SIRT1	3	affinity chromatography technology, enzymatic study, affinity chromatography technology	Nihira NT (2017), Nihira NT (2017), Nihira NT (2017)	3
L3MBTL2	1	MBD3	4	affinity chromatography technology	Huttlin EL (2017)	1
ZNF219	3	MBD3	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DNMT3B	3	RBBP4	3	affinity chromatography technology	Cai Y (2014)	1
ATR	6	MTA2	1	affinity chromatography technology	Schmidt DR (1999)	1
CHD4	22	GATAD2B	15	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rahman S (2011), Huttlin EL (2015), Huttlin EL (2017)	3
MTA1	3	ZNF521	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA3	3	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Wan C (2015), Hauri S (2016)	3
HIC1	1	MBD3	4	affinity chromatography technology	Van Rechem C (2010)	1
HDAC1	4	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Yao YL (2003), Yao YL (2003), Yao YL (2003), Mazumdar A (2001), Mazumdar A (2001), Yoo YG (2006), Liu XF (2004), Khaleque MA (2008), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Millard CJ (2016), Millard CJ (2016)	21
NTRK1	1	NAA10	9	affinity chromatography technology	Emdal KB (2015)	1
TRIM25	5	GATAD2B	15	affinity chromatography technology	Choudhury NR (2017)	1
ZMYND8	5	MTA3	3	affinity chromatography technology	Hein MY (2015)	1
PHF20L1	4	KDM1A	2	two hybrid	Weimann M (2013)	1
TIGD6	0	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
RNF2	1	SYNCRIP	6	affinity chromatography technology	Cao Q (2014)	1
NR2C1	0	RBBP7	1	affinity chromatography technology	Cui S (2011)	1
TCF19	0	MTA2	1	affinity chromatography technology	Huttlin EL (2017)	1
CHD7	22	MTA1	3	affinity chromatography technology	Engelen E (2011)	1
TXNIP	2	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology	Han SH (2003), Kwon HJ (2010), Kwon HJ (2010)	3
NTRK1	1	CHD4	22	affinity chromatography technology	Emdal KB (2015)	1
PITX3	2	PARK7	0	imaging technique	Reddy SD (2011)	1
HIC1	1	RBBP4	3	affinity chromatography technology	Van Rechem C (2010)	1
HSF1	1	SIRT1	3	affinity chromatography technology	Westerheide SD (2009)	1
NR2C1	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
FAM219A	1	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DNMT3B	3	MTA1	3	affinity chromatography technology	Cai Y (2014)	1
CDK2AP1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	5
DNMT3B	3	SIRT1	3	affinity chromatography technology	OHagan HM (2011)	1
RBBP4	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Hakimi MA (2003), Zhang Y (2002), Tong JK (1998), Sun JM (2007), Sun JM (2007), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Wan C (2015), Hauri S (2016)	14
CDK7	0	MTA1	3	affinity chromatography technology	Talukder AH (2003)	1
EED	1	RNF2	1	affinity chromatography technology, imaging technique, pull down, affinity chromatography technology	Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014)	4
CDK7	0	CCNH	3	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, biochemical, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, pull down	Maekelae TP (1994), Maekelae TP (1994), Maekelae TP (1994), Maekelae TP (1994), Yee A (1995), Garber ME (2000), Garber ME (2000), Jeronimo C (2007), Reardon JT (1996), Liu J (1997), Cujec TP (1997), Epie N (2005), Bockstaele L (2006), Tassan JP (1995), Chen D (1999), Havugimana PC (2012), Poterszman A (1997), Nguyen VT (2001), Garrett S (2001), Pinhero R (2004), Varjosalo M (2013), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Luo J (2015)	25
TRIM25	5	LOXL2	5	affinity chromatography technology	Choudhury NR (2017)	1
DNMT1	5	DNMT3B	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, genetic interference, affinity chromatography technology, affinity chromatography technology	Lehnertz B (2003), Kim GD (2002), Kim GD (2002), Geiman TM (2004), Woloszynska-Read A (2007), OHagan HM (2011), Rigbolt KT (2011)	7
NTRK1	1	DNMT1	5	affinity chromatography technology	Emdal KB (2015)	1
HDAC2	1	LMO4	1	pull down, affinity chromatography technology	Singh RR (2005), Singh RR (2005)	2
PARK7	0	MBD3	4	affinity chromatography technology	Opsahl JA (2010)	1
MBD3	4	GATAD2B	15	pull down, pull down, affinity chromatography technology, imaging technique, pull down, two hybrid, affinity chromatography technology, biochemical, two hybrid, affinity chromatography technology	Brackertz M (2002), Feng Q (2002), Feng Q (2002), Feng Q (2002), Gong Z (2006), Rolland T (2014), Huttlin EL (2015), Wan C (2015), Yu H (2011), Huttlin EL (2017)	10
ELAVL1	0	MBD3	4	affinity chromatography technology	Abdelmohsen K (2009)	1
CDK2AP1	1	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
EP300	36	ESR1	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, two hybrid, enzymatic study, affinity chromatography technology, enzymatic study, pull down, pull down	Fajas L (2002), Fan S (2002), Fan S (2002), Fan S (2002), Kang YK (2002), Kang YK (2002), Hao L (2010), Jin W (2008), Cui Y (2006), Dutertre M (2003), Dutertre M (2003), Shiozawa T (2003), Kim SH (2010), Ma Y (2010), Ma Y (2010), Fujita T (2003), Likhite VS (2004), Band AM (2011), Loven MA (2004), Nalvarte I (2010), Yi P (2015)	21
DNMT3B	3	SIN3A	13	biochemical	Geiman TM (2004)	1
TP53	0	NELFCD	3	genetic interference	Xie L (2013)	1
IKZF1	2	FOXK2	9	affinity chromatography technology	Huttlin EL (2017)	1
ESR1	0	HIF1A	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tarallo R (2011), Cho J (2005), Cho J (2005)	3
MBD2	1	CHD3	19	pull down, affinity chromatography technology	Zhang Y (1999), Feng Q (2001)	2
ZNF219	3	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC1	4	ZNF521	3	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Huttlin EL (2017)	2
MTA1	3	MNAT1	0	two hybrid, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Talukder AH (2003), Talukder AH (2003), Talukder AH (2003), Talukder AH (2003), Talukder AH (2003)	5
LMO4	1	KRT40	0	two hybrid	Rolland T (2014)	1
RBBP7	1	GATAD2B	15	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Feng Q (2002), Gong Z (2006), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
DNMT1	5	KDM1A	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Clements EG (2012), Clements EG (2012), Cui S (2011), Cui S (2011)	4
MBD3	4	MBD2	1	two hybrid, pull down, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, pull down, affinity chromatography technology	Jiang CL (2004), Zhang Y (1999), Tatematsu KI (2000), Tatematsu KI (2000), Tatematsu KI (2000), Tatematsu KI (2000), Jin SG (2005), Jin SG (2005), Jin SG (2005), Feng Q (2001)	10
TP53	0	DNMT1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Palii SS (2008), Zhang H (2013), Zhang H (2013)	3
TRIM25	5	ELAVL1	0	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
GATAD2B	15	GATAD2A	3	biochemical	Wan C (2015)	1
MTA1	3	KRTAP10-8	0	two hybrid	Rolland T (2014)	1
CHD3	19	VIM	0	two hybrid	Goehler H (2004)	1
PARK7	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Opsahl JA (2010), Opsahl JA (2010), Opsahl JA (2010)	3
FOXK2	9	RBBP4	3	pull down	Shan L (2016)	1
MTA1	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Mazumdar A (2001), Mazumdar A (2001), Mazumdar A (2001), Li DQ (2010), Yan C (2003), Balasenthil S (2007), Ohshiro K (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	16
MBD2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Brackertz M (2002), Ng HH (1999), Zhang Y (1999), Angrisano T (2006), Feng Q (2001), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	8
SUZ12	0	KHDRBS2	1	affinity chromatography technology	Huttlin EL (2017)	1
HDAC1	4	HIF1A	1	pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mahon PC (2001), Yoo YG (2006), Kim SH (2007), Kim SH (2007), Bodily JM (2011), Yeh IJ (2013), Yeh IJ (2013)	7
ELAVL1	0	KPNA4	0	affinity chromatography technology	Abdelmohsen K (2009)	1
HSF1	1	KPNA4	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Taipale M (2014), Taipale M (2014), Boldt K (2016)	3
HDAC1	4	HSF1	1	affinity chromatography technology, affinity chromatography technology	Fritah S (2009), Khaleque MA (2008)	2
RBBP4	3	BCL11A	14	affinity chromatography technology	Hauri S (2016)	1
NTRK1	1	VPS18	4	affinity chromatography technology	Emdal KB (2015)	1
MTA1	3	POLD3	0	affinity chromatography technology	Cui S (2011)	1
MBD3L2	0	RBBP4	3	pull down	Jin SG (2005)	1
SOX2	4	HDAC2	1	affinity chromatography technology	Engelen E (2011)	1
ATR	6	EP300	36	affinity chromatography technology, affinity chromatography technology, pull down	Stauffer D (2007), Stauffer D (2007), Stauffer D (2007)	3
L3MBTL2	1	MTA1	3	affinity chromatography technology	Huttlin EL (2017)	1
HDAC1	4	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Yao YL (2003), Fleischer TC (2003), Fleischer TC (2003), Yang L (2003), Grozinger CM (1999), Zhang J (2002), Zhang J (2002), You A (2001), Zhang Y (1999), Zhang Y (2002), Tong JK (1998), Hassig CA (1998), Yasui D (2002), Huang EY (2000), Huang EY (2000), Kuzmichev A (2002), Kuzmichev A (2002), Martinowich K (2003), Martinowich K (2003), Suzuki M (2003), Suzuki M (2006), Nakamura T (2002), Wei Q (2005), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Skowyra D (2001), Humphrey GW (2001), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Oh YM (2009), Wan C (2015), Hein MY (2015), Hsu DS (2014), Huttlin EL (2017)	45
TRIM25	5	EP300	36	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
ZNF512B	2	LZTS2	4	two hybrid	Colland F (2004)	1
RBBP4	3	GATAD2B	15	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Feng Q (2002), Gong Z (2006), Huttlin EL (2017), Hauri S (2016)	5
SIRT1	3	HIF1A	1	affinity chromatography technology, pull down, affinity chromatography technology	Lim JH (2010), Lim JH (2010), Lim JH (2010)	3
SUMO2	0	UBE2I	0	affinity chromatography technology, pull down, two hybrid, two hybrid, pull down, pull down, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, biochemical, affinity chromatography technology, affinity chromatography technology	Li T (2006), Knipscheer P (2007), Boutell C (2011), Hecker CM (2006), Hecker CM (2006), Zilio N (2013), Tatham MH (2001), Knipscheer P (2007), Ullmann R (2012), Matic I (2008), Xu Y (2014), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	14
MBD3	4	CHD4	22	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Sakai H (2002), Cui S (2011), Havugimana PC (2012), Quan J (2014)	4
EP300	36	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology	Han Y (2008), Mayanil CS (2006), Simone C (2004), Simone C (2004), Simone C (2004), Liu Y (2012), Mizuguchi Y (2012)	7
VIM	0	SH3GL1	3	two hybrid	Vinayagam A (2011)	1
TP53	0	POLD3	0	genetic interference	Xie L (2013)	1
SUMO2	0	RBBP7	1	pull down	Ouyang J (2009)	1
RBBP7	1	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
CDK2AP1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Bantscheff M (2011), Joshi P (2013), Hein MY (2015)	4
PHF20L1	4	MBD3	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NACC2	2	MTA1	3	affinity chromatography technology, affinity chromatography technology, pull down	Xuan C (2013), Xuan C (2013), Xuan C (2013)	3
RBBP4	3	POLD3	0	affinity chromatography technology	Cui S (2011)	1
NTRK1	1	SYNCRIP	6	affinity chromatography technology	Emdal KB (2015)	1
CHD4	22	MTA3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Kwintkiewicz J (2011), Kwintkiewicz J (2011), Bantscheff M (2011), Wan C (2015)	4
MBD3	4	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Sakai H (2002), Noh EJ (2009), Noh EJ (2009), Sun JM (2007), Adenuga D (2010), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	9
SOX2	4	CHD4	22	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Engelen E (2011)	2
MBD3L1	0	SIN3A	13	affinity chromatography technology	Jiang CL (2004)	1
ZNF219	3	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
HIF1A	1	KPNA4	0	pull down	Chachami G (2009)	1
ESR1	0	RBBP7	1	pull down, affinity chromatography technology	Creekmore AL (2008), Tarallo R (2011)	2
CDK7	0	HDAC2	1	affinity chromatography technology	Talukder AH (2003)	1
CHD5	12	HIST3H3	0	affinity chromatography technology	Quan J (2014)	1
CHD3	19	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology	Xue Y (1998), Havugimana PC (2012), Hauri S (2016)	3
UBE2I	0	ZEB2	7	enzymatic study	Long J (2005)	1
EP300	36	HIST2H3C	0	enzymatic study	Cereseto A (2005)	1
DNMT1	5	MBD3	4	affinity chromatography technology	Cui S (2011)	1
SUZ12	0	CHD4	22	affinity chromatography technology	Cao Q (2014)	1
CHD5	12	HDAC2	1	affinity chromatography technology, biochemical	Quan J (2014), Wan C (2015)	2
UBE2I	0	HDAC1	4	enzymatic study	Citro S (2013)	1
PHF20L1	4	BCL11A	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PITX3	2	MTA1	3	imaging technique	Reddy SD (2011)	1
HDAC1	4	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology	Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017)	48
ELAVL1	0	TRIM33	4	affinity chromatography technology	Abdelmohsen K (2009)	1
JUN	0	CHD3	19	affinity chromatography technology	Aguilera C (2011)	1
HDAC1	4	HIST3H3	0	enzymatic study, unspecified method	Shi Y (2003), Vermeulen M (2010)	2
TRIM25	5	NAA10	9	affinity chromatography technology	Choudhury NR (2017)	1
PHF20L1	4	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SOX2	4	MTA1	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
NACC2	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, pull down	Xuan C (2013), Xuan C (2013), Xuan C (2013)	3
HIF1A	1	MTA1	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down	Yoo YG (2006), Yoo YG (2006), Yoo YG (2006), Moon HE (2006), Moon HE (2006)	5
PHF20L1	4	KPNA4	0	affinity chromatography technology	Huttlin EL (2015)	1
ZEB2	7	RBBP4	3	affinity chromatography technology	Verstappen G (2008)	1
ZMYND8	5	HDAC2	1	affinity chromatography technology	Hein MY (2015)	1
SIRT1	3	DNMT1	5	enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Peng L (2011), Peng L (2011), Peng L (2011), OHagan HM (2011), OHagan HM (2011)	5
NTRK1	1	KDM1A	2	affinity chromatography technology	Emdal KB (2015)	1
IKZF1	2	CHD3	19	pull down, two hybrid, affinity chromatography technology	Kim J (1999), Kim J (1999), Huttlin EL (2017)	3
MTA3	3	CHD3	19	affinity chromatography technology, biochemical	Fujita N (2003), Wan C (2015)	2
FAM219A	1	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC1	4	ZMYND8	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Hein MY (2015)	3
MDM2	2	RNF2	1	affinity chromatography technology, affinity chromatography technology	Wen W (2013), Wen W (2013)	2
SIN3A	13	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Koipally J (1999), Koipally J (2002), Koipally J (2002)	4
ZMYND8	5	MBD3	4	affinity chromatography technology	Hein MY (2015)	1
ZMYND8	5	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
TCF19	0	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
PARK7	0	GATAD2B	15	affinity chromatography technology	Opsahl JA (2010)	1
NR2C1	0	MBD3	4	affinity chromatography technology	Cui S (2011)	1
FOXP1	23	MTA1	3	affinity chromatography technology	Chokas AL (2010)	1
BLOC1S1	0	HDAC2	1	affinity chromatography technology	Mishra SK (2003)	1
LMO4	1	HDAC1	4	affinity chromatography technology	Singh RR (2005)	1
SIX3	3	MTA1	3	affinity chromatography technology	Kumar R (2010)	1
DNMT3B	3	HIC1	1	affinity chromatography technology, affinity chromatography technology	Zeng S (2016), Zeng S (2016)	2
NANOG	0	SUZ12	0	affinity chromatography technology	Oliviero G (2015)	1
MTA3	3	GATAD2B	15	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
PARK7	0	MTA2	1	affinity chromatography technology, affinity chromatography technology	Opsahl JA (2010), Opsahl JA (2010)	2
ELAVL1	0	MTA1	3	affinity chromatography technology	Abdelmohsen K (2009)	1
SGTB	2	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
ESR1	0	NR2C2	0	pull down, pull down	Shyr CR (2002), Shyr CR (2002)	2
SUMO2	0	VIM	0	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
ELAVL1	0	SUZ12	0	affinity chromatography technology, affinity chromatography technology	Abdelmohsen K (2009), Cao Q (2014)	2
NR2C1	0	DNMT1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
MBD3L1	0	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
CHD3	19	RBBP7	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
ZFPM2	4	HDAC2	1	affinity chromatography technology	Roche AE (2008)	1
MBD3L2	0	CHD4	22	pull down	Jin SG (2005)	1
MBD3L2	0	HDAC1	4	pull down	Jin SG (2005)	1
CCNH	3	MNAT1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, biochemical, affinity chromatography technology	Ewing RM (2007), Talukder AH (2003), Bockstaele L (2006), Havugimana PC (2012), Pinhero R (2004), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	8
MBD3L1	0	MBD2	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Jiang CL (2004), Jiang CL (2004), Jiang CL (2004)	4
TCF19	0	MTA3	3	affinity chromatography technology	Huttlin EL (2017)	1
TRIM25	5	NR2C2	0	affinity chromatography technology	Choudhury NR (2017)	1
LOXL2	5	RBBP7	1	affinity chromatography technology	Herranz N (2012)	1
SOX2	4	SIN3A	13	affinity chromatography technology	Engelen E (2011)	1
CDK2AP1	1	ZMYND8	5	affinity chromatography technology	Hein MY (2015)	1
HDAC2	1	GATAD2A	3	biochemical, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013)	3
MDM2	2	TP53	0	enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, protein complementation assay, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, two hybrid, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, pull down, pull down, unspecified method, affinity chromatography technology, two hybrid, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, protein complementation assay, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, x-ray crystallography, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, x-ray crystallography, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, far western blotting, affinity chromatography technology, x-ray crystallography, unspecified method, pull down, pull down, pull down, unspecified method, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference, fluorescent resonance energy transfe, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, biochemical, unspecified method, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, pull down, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down, x-ray crystallography, protein complementation assay, imaging technique, affinity chromatography technology, enzymatic study, affinity chromatography technology, fluorescent resonance energy transfe, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, enzymatic study, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, fluorescent resonance energy transfe, pull down, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, imaging technique, enzymatic study, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, enzymatic study, pull down, pull down, unspecified method, fluorescent resonance energy transfe, two hybrid, pull down	Li M (2003), Latonen L (2001), Zhang Y (2003), Zhang Y (2003), Kurki S (2003), Kurki S (2003), Freeman DJ (2003), Ito A (2002), Ito A (2002), Grossman SR (1998), Fang S (2000), Liu G (2000), Zhang Y (1998), Zhang Y (1998), Chen J (1993), Thut CJ (1997), Leung KM (2002), Wawrzynow B (2009), Ochocka AM (2009), Chen D (2009), Hedstroem E (2009), Brenkman AB (2008), Qiu W (2008), Qiu W (2008), Zhang Z (2008), Muller P (2008), Colaluca IN (2008), Colaluca IN (2008), Colaluca IN (2008), Tang Y (2008), Tang Y (2008), Lu X (2007), Lukashchuk N (2007), Lukashchuk N (2007), Lee JH (2007), Carter S (2007), Sasaki M (2007), Brooks CL (2007), Li L (2007), Becker K (2007), Zhao BX (2006), Zhao BX (2006), Abida WM (2007), Yang WH (2006), Ma J (2006), Wallace M (2006), Shimizu H (2006), Andrews P (2006), Yang J (2009), Zhu Z (2009), Wang C (2005), Higashitsuji H (2005), Higashitsuji H (2005), Yan C (2005), Vega FM (2004), Dai MS (2004), Dai MS (2004), Groenroos E (2004), Ohkubo S (2006), Sui G (2004), Di Stefano V (2004), Brignone C (2004), Katayama H (2004), Linares LK (2003), OKeefe K (2003), Wang W (2003), Blattner C (2002), Matt T (2004), Matt T (2004), Eyckerman S (2005), Shimizu H (2002), Shimizu H (2002), Migliorini D (2002), Gu J (2001), Sengupta S (2001), Chernov MV (2001), Cross B (2011), Cross B (2011), Cross B (2011), Buschmann T (2001), Nakamura S (2000), Rodriguez MS (2000), Rodriguez MS (2000), Geyer RK (2000), Zaika A (1999), Maki CG (1999), Chen L (2010), Chen L (2010), Lin RK (2010), Fuchs SY (1998), Xirodimas DP (2001), Fuchs SY (1998), Inoue T (2001), Wu L (2011), Du W (2009), Li DQ (2009), Illuzzi JL (2011), Oliver TG (2011), Kim MM (2007), Marchenko ND (2007), Vaseva AV (2009), Vaseva AV (2009), Lai KP (2010), Naderi EH (2011), Zdzalik M (2010), Singh RK (2007), Meng L (2011), Moore L (2007), Kim S (2010), Inoue Y (2011), Fraser JA (2010), Worrall EG (2009), Wu H (2011), Wang KS (2011), Wang KS (2011), Wang KS (2011), Izumi T (2010), Huang YF (2009), Tang J (2006), Tang J (2006), Fu X (2010), Fu X (2010), Shloush J (2011), Yadavilli S (2009), Stevenson LF (2007), Suzuki T (2010), Cheng Q (2009), Kulikov R (2010), Kulikov R (2010), Li L (2010), Li L (2010), Cheng Q (2011), Li D (2011), Nie J (2010), Demma M (2010), Sun XX (2011), Jung CR (2010), Jung CR (2010), Jung CR (2010), Jung CR (2010), Nishida T (2011), Li M (2011), Li M (2011), Amson R (2011), Amson R (2011), Bhatt P (2011), David Y (2011), Zhang Y (2010), Liu J (2010), Liu J (2010), Song MS (2008), Cummins JM (2004), Kim CK (2010), Kim CK (2010), Yan C (2010), Wang X (2011), Phillips A (2010), Phillips A (2010), Kang HN (2011), Kang HN (2011), Wang X (2004), Sionov RV (2001), Wei S (2012), Camus S (2012), Ding B (2012), Yang Z (2012), Yang Z (2012), Tripathi V (2007), Tripathi V (2007), Dai C (2011), Chen S (2012), Honda R (1997), Kinyamu HK (2003), Zhan C (2012), Zhan C (2012), Lee CW (2010), Zhou X (2012), Bouska A (2008), Wade M (2012), Ferreon JC (2009), Domenici F (2011), Uldrijan S (2007), Uldrijan S (2007), Stad R (2000), Stad R (2000), Banks D (2006), Banks D (2006), Bernal F (2010), Bernal F (2010), Jain AK (2012), Kane SA (2000), Tan Z (2000), Yang Z (2012), Wawrzynow B (2007), Wawrzynow B (2007), Wawrzynow B (2007), Hiramatsu K (2006), Bao-Lei T (2006), Kulikov R (2005), Yang Y (2005), Lindstroem MS (2007), Bech-Otschir D (2001), Li Y (2012), Gillotin S (2010), Burch L (2004), Liu WL (2001), OHagan HM (2004), OHagan HM (2004), Funari G (2009), Candeias MM (2008), Brew CT (2006), Wang J (2011), Calabro V (2002), Burch L (2004), Iyappan S (2010), Poyurovsky MV (2010), Poyurovsky MV (2010), Poyurovsky MV (2010), Kurki S (2004), Tian LF (2006), Wang J (2006), Bae S (2012), Bae S (2012), Frazier DP (2012), Frazier DP (2012), Lew QJ (2012), Lew QJ (2012), Huart AS (2012), Li Z (2004), Balint E (1999), Balint E (1999), Funston G (2012), Dou X (2012), Sadagopan S (2012), Sadagopan S (2012), Dixit D (2012), Roxburgh P (2012), Xu L (2012), Drago-Ferrante R (2008), Li H (2009), Negorev D (2001), Wang X (2012), Wang X (2012), Wang X (2012), Boettger A (1997), Jung H (2008), Oliner JD (1992), Seemann S (2005), Kawai H (2007), Schuster K (2007), Dawson R (2003), DArcy P (2009), Schon O (2004), Schon O (2004), Hogan C (2008), Lottin-Divoux S (2005), Latini P (2011), Latini P (2011), Latini P (2011), McCoy MA (2003), Kussie PH (1996), Shieh SY (1997), Shieh SY (1997), Naski N (2009), Naski N (2009), Schon O (2002), Tamborini E (2001), Wade M (2006), Wade M (2006), Lohrum MA (2003), Garcia JF (2002), Garcia JF (2002), Kallen J (2009), Kulikov R (2006), Kulikov R (2006), Czarna A (2009), Czarna A (2009), Hu B (2007), Chi SW (2005), Yu GW (2006), Yu GW (2006), Saji S (2001), Chen L (1997), Zhang H (1998), Issaeva N (2004), Wade M (2008), Wade M (2008), Chen HF (2007), Chen HF (2007), Li HH (2004), Wang J (2011), Gu L (2009), Gu L (2009), Meng L (2008), Meng L (2008), Okamoto K (2006), Malaguarnera R (2008), Zhou M (2003), Zhou M (2003), Di Conza G (2012), Xirodimas DP (2004), Auger KR (2005), Li J (2011), Li J (2011), Li J (2011), Lee SJ (2007), Chau JF (2012), Lu X (2005), Mazars A (2010), Mazars A (2010), Mazars A (2010), Olson DC (1993), Picksley SM (1994), Issaeva N (2004), Issaeva N (2004), Zhang J (2012), Wen W (2013), Wen W (2013), Bursac S (2012), Yang Y (2013), Yang Y (2013), Landre V (2013), Pettersson S (2012), Thin TH (2007), Thin TH (2007), Piccinin S (2012), Shan B (2012), Caratozzolo MF (2012), Lui K (2013), Kobet E (2000), Lim KH (2010), Ranaweera RS (2013), Cui D (2013), Ebina M (2013), He Y (2013), He Y (2013), Siepe D (2009), Suh HW (2013), Zhan YA (2013), Wang J (2011), Hjerpe R (2010), Murray MF (2007), Jin L (2013), Jin L (2013), Zhang R (2013), Yan S (2013), Sun XX (2011), Heyne K (2014), Heyne K (2014), Bista M (2013), Jin J (2014), Mikawa T (2014), Qi M (2014), Cheng Q (2014), Zhang HH (2014), Perry ME (2000), Nishizaki M (2004), Sanchez-Aguilera A (2006), Chen YC (2013), Bertamino A (2013), Ding G (2013), Kubo N (2013), Kubo N (2013), Hsueh KW (2013), Kofod-Olsen E (2014), Fogeron ML (2013), Chang YS (2013), Gotoh T (2014), Gotoh T (2014), Oi N (2014), Corcoran CA (2009), Corcoran CA (2009), Ayroldi E (2014), Wu G (2014), Rajendra R (2004), Zhang J (2014), Lee MG (2014), Lee MG (2014), Freedman DA (1997), Freedman DA (1997), Saxena A (2006), Shi D (2009), Lohrum MA (2001), Lohrum MA (2001), Grossman SR (2003), Yan S (2013), Xirodimas DP (2004), Yasuhara T (2014), Yasuhara T (2014), Yasuhara T (2014), Yasuhara T (2014), Saville MK (2004), Rodriguez MS (1999), Lui K (2013), Wu PY (2003), Pavithra L (2009), He Y (2013), Tan BX (2014), Huttlin EL (2015), Marcar L (2015), Borcherds W (2014), Borcherds W (2014), Li YC (2014), Ayroldi E (2014), Ling X (2014), Batuello CN (2015), Zhu N (2006), Mo XL (2015), Chen TC (2014), Stindt MH (2015), Caratozzolo MF (2014), Li X (2015), Saxena R (2016), Reed SM (2014), Du C (2016), Du C (2016), Du C (2016), Fraser JA (2015), Fraser JA (2015), Wu B (2015), Qin JJ (2015), Raza S (2015), Raza S (2015), Yamauchi T (2014), Yamauchi T (2014), Yamauchi T (2014), Shi Y (2010), Ahn HJ (2015), Lim KH (2015), Kang JH (2016), Chen J (2015), Liu X (2016), Yang P (2016), Yang P (2016), Liu D (2016), Liu D (2016), Liu D (2016), Datta D (2015), Reddy BA (2014), He X (2016), Shostak K (2014), Liu LJ (2016), Liu LJ (2016), Stegh AH (2010), Liu XH (2005), Medina-Medina I (2016), Medina-Medina I (2016), Kayama K (2017), Singh AK (2016), Liu WT (2016), Yue X (2016), Soares J (2015), Mukhopadhyay R (2016), Mukhopadhyay R (2016), Zhou X (2016), Zhou X (2016), Xie X (2016), Leao M (2015), Luo H (2016), Luo H (2016), Xie N (2016), Maeda R (2017), Maeda R (2017), Maeda R (2017), Sheng W (2017), Sheng W (2017), Liu M (2010), Huttlin EL (2017), Chauhan KM (2016), Goetz C (1999), Zhang J (2017), Unger T (1999), Liu Z (2004), Wu W (2015), Tan G (2017), Nomura K (2017), Lu W (2017), Lu W (2017), Hjerrild M (2001), Landre V (2017), Landre V (2017), Landre V (2017), Landre V (2017), Shangary S (2008), Shangary S (2008), Du WW (2017), Du WW (2017), Bista M (2013), Bista M (2013), Jin M (2017), LaRusch GA (2007), LaRusch GA (2007), Kurokawa M (2013), Ivanov AA (2017), Wong JH (2017), Wong JH (2017)	496
EED	1	HIST3H3	0	unspecified method, x-ray crystallography	Xu C (2010), Xu C (2010)	2
JUN	0	HIF1A	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Alfranca A (2002), Yu B (2009), Yu B (2009)	3
SIN3A	13	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
NAA10	9	HIF1A	1	affinity chromatography technology, pull down, affinity chromatography technology, pull down	Yoo YG (2006), Yoo YG (2006), Arnesen T (2005), Arnesen T (2005)	4
MTA1	3	SIN3A	13	affinity chromatography technology	Yao YL (2003)	1
BCL11B	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	3
ZFPM2	4	MTA2	1	affinity chromatography technology, affinity chromatography technology	Roche AE (2008), Roche AE (2008)	2
ZNF219	3	CHD5	12	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FOXK2	9	CHD4	22	affinity chromatography technology	Li X (2015)	1
PHF20L1	4	MTA2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD4	22	EP300	36	affinity chromatography technology, affinity chromatography technology, pull down	Qi W (2016), Qi W (2016), Qi W (2016)	3
MBD3L2	0	RBBP7	1	pull down	Jin SG (2005)	1
HSF1	1	MTA1	3	pull down, affinity chromatography technology, affinity chromatography technology	Khaleque MA (2008), Khaleque MA (2008), Khaleque MA (2008)	3
CCNH	3	MTA1	3	affinity chromatography technology	Talukder AH (2003)	1
HDAC1	4	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2003), You A (2001), You A (2001), Shi YJ (2005), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Godmann M (2007), Godmann M (2007), Terhune SS (2010), Godmann M (2010), Godmann M (2010), Wang Y (2009), Nicholson TB (2011), Li Q (2011), Cui S (2011), Cui S (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Wang Q (2016), Huttlin EL (2017)	26
ZFPM2	4	HDAC1	4	affinity chromatography technology	Roche AE (2008)	1
TRIM25	5	GATAD2A	3	affinity chromatography technology	Choudhury NR (2017)	1
NELFCD	3	MTA1	3	two hybrid	Stelzl U (2005)	1
NACC2	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Xuan C (2013), Xuan C (2013)	2
NANOG	0	RNF2	1	affinity chromatography technology	Oliviero G (2015)	1
NACC2	2	MTA2	1	affinity chromatography technology, affinity chromatography technology, pull down	Xuan C (2013), Xuan C (2013), Xuan C (2013)	3
CHD4	22	RBBP4	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Wan C (2015), Hauri S (2016)	9
HIST2H3C	0	MTA1	3	affinity chromatography technology	Li J (2012)	1
CPNE5	4	MTA2	1	affinity chromatography technology	Huttlin EL (2017)	1
SUMO2	0	MTA1	3	pull down	Ouyang J (2009)	1
KDM1A	2	MBD3	4	affinity chromatography technology, affinity chromatography technology, two hybrid	Wang Y (2009), Li Q (2011), Weimann M (2013)	3
SGTB	2	BAG6	2	affinity chromatography technology	Hein MY (2015)	1
IKZF1	2	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), ONeill DW (2000), ONeill DW (2000), Huttlin EL (2017)	4
CHD4	22	SIN3A	13	affinity chromatography technology	Zhang Y (1998)	1
MTA1	3	ITGB3BP	0	two hybrid, pull down, pull down	Talukder AH (2004), Talukder AH (2004), Talukder AH (2004)	3
KDM1A	2	SIN3A	13	affinity chromatography technology	You A (2001)	1
L3MBTL2	1	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
MTA3	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
SIRT1	3	JUN	0	affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology	Gao Z (2008), Zhang R (2010), Zhang R (2010), Armour SM (2013)	4
ZNF827	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
NTRK1	1	TRIM33	4	affinity chromatography technology	Emdal KB (2015)	1
NR2C1	0	SIN3A	13	affinity chromatography technology	Cui S (2011)	1
PHF20L1	4	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ZFPM1	8	MTA1	3	x-ray crystallography	Lejon S (2011)	1
MTA3	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Fujita N (2003), Kwintkiewicz J (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	8
SUMO2	0	HDAC2	1	pull down	Ouyang J (2009)	1
FOXK2	9	PHF20L1	4	affinity chromatography technology	Li X (2015)	1
ZNF827	2	MTA1	3	affinity chromatography technology	Conomos D (2014)	1
RNF2	1	MTA1	3	affinity chromatography technology	Cao Q (2014)	1
VPS18	4	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
TP53	0	MTA1	3	pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Yao YL (2003), Li DQ (2010), Moon HE (2007), Moon HE (2007), Li DQ (2009), Li DQ (2009)	6
MTA1	3	TRIM33	4	biochemical	Wan C (2015)	1
NANOG	0	MBD3	4	affinity chromatography technology	Oliviero G (2015)	1
PHF20L1	4	CHD3	19	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ZFPM2	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Roche AE (2008), Roche AE (2008)	2
ATR	6	TP53	0	pull down, unspecified method, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study, genetic interference	Fabbro M (2004), Kim ST (1999), Lin WC (2001), Wang X (2011), Lakin ND (1999), Rocha S (2005), Dodson GE (2006), Kim ST (1999), Xie L (2013)	9
SIRT1	3	SUZ12	0	affinity chromatography technology, affinity chromatography technology	Kuzmichev A (2005), OHagan HM (2011)	2
BAG6	2	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
ZNF219	3	CHD3	19	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ZNF827	2	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
HSF1	1	KPNA3	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Taipale M (2014), Taipale M (2014), Boldt K (2016)	3
NFATC2	1	GATAD2A	3	affinity chromatography technology	Gabriel CH (2016)	1
ESR1	0	CHD4	22	affinity chromatography technology	Tarallo R (2011)	1
ZEB2	7	MTA2	1	affinity chromatography technology	Verstappen G (2008)	1
MTA1	3	KHDRBS2	1	two hybrid	Rolland T (2014)	1
PARK7	0	RBBP4	3	affinity chromatography technology	Opsahl JA (2010)	1
CDK7	0	ESR1	0	enzymatic study	Chen D (2000)	1
RBBP7	1	ZNF423	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC1	4	L3MBTL2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
FOXK2	9	MTA1	3	affinity chromatography technology, affinity chromatography technology, biochemical	Shan L (2016), Shan L (2016), Shan L (2016)	3
VIM	0	NELFCD	3	affinity chromatography technology	Hein MY (2015)	1
RNF2	1	TRIM25	5	affinity chromatography technology	Cao Q (2014)	1
NTRK1	1	UBE3C	5	affinity chromatography technology	Emdal KB (2015)	1
MDM2	2	EED	1	affinity chromatography technology	Wienken M (2016)	1
UBE2I	0	MDM2	2	pull down, affinity chromatography technology, enzymatic study, unspecified method	Buschmann T (2001), Buschmann T (2001), Buschmann T (2001), Buschmann T (2001)	4
MBD3L1	0	ZNF423	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NANOG	0	TRIM33	4	affinity chromatography technology	Oliviero G (2015)	1
CHD7	22	MTA2	1	affinity chromatography technology	Engelen E (2011)	1
PHF20L1	4	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SIRT1	3	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Zhao W (2008), Liu X (2011), Inoue Y (2011), Jain AK (2012), Langley E (2002), Langley E (2002), Langley E (2002), Kim JE (2008), Kim JE (2008), Kim EJ (2007), Kim EJ (2007), Busch F (2012), Busch F (2012), Hasegawa K (2008), Hasegawa K (2008), Hasegawa K (2008), Zannini L (2012)	17
TRIM25	5	MTA1	3	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Zang HL (2017)	2
NACC2	2	MTA3	3	pull down	Xuan C (2013)	1
DNMT3B	3	MTA2	1	affinity chromatography technology	Cai Y (2014)	1
RBBP4	3	RBBP7	1	biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
DLST	3	MTA1	3	affinity chromatography technology	Malty RH (2017)	1
CDK7	0	MNAT1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, pull down	Talukder AH (2003), Yee A (1995), Jeronimo C (2007), Busso D (2000), Cujec TP (1997), Tassan JP (1995), Chen D (1999), Havugimana PC (2012), Varjosalo M (2013), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Luo J (2015)	13
NACC2	2	CHD4	22	affinity chromatography technology, affinity chromatography technology, imaging technique	Xuan C (2013), Xuan C (2013), Xuan C (2013)	3
ELAVL1	0	MTA3	3	affinity chromatography technology	Abdelmohsen K (2009)	1
SOX2	4	MBD3	4	affinity chromatography technology	Engelen E (2011)	1
ZNF219	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA3	3	MBD3	4	affinity chromatography technology, biochemical	Fujita N (2003), Wan C (2015)	2
TRIM25	5	FOXK2	9	affinity chromatography technology	Choudhury NR (2017)	1
HIF1A	1	SIN3A	13	affinity chromatography technology	Cai Q (2013)	1
HIST3H3	0	SUZ12	0	pull down	Bartke T (2010)	1
DNMT3B	3	HDAC1	4	biochemical, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Geiman TM (2004), Suzuki M (2006), Geiman TM (2004), Geiman TM (2004), Cai Y (2014)	5
SOX2	4	TRIM33	4	affinity chromatography technology	Cox JL (2013)	1
MTA1	3	PARK7	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Reddy SD (2011), Reddy SD (2011), Reddy SD (2011), Opsahl JA (2010)	4
SOX2	4	TSHZ3	6	affinity chromatography technology	Cox JL (2013)	1
TP53	0	EP300	36	pull down, genetic interference, pull down, enzymatic study, pull down, pull down, affinity chromatography technology, biochemical, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, imaging technique, affinity chromatography technology, enzymatic study, affinity chromatography technology, x-ray crystallography, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, unspecified method, affinity chromatography technology, enzymatic study, unspecified method, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, x-ray crystallography, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, unspecified method	An W (2004), Pastorcic M (2000), Livengood JA (2002), Livengood JA (2002), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Tang Y (2008), Wang H (2008), Valbuena A (2008), Shi D (2009), Vega FM (2004), Finlan L (2004), Groenroos E (2004), Zhao Y (2006), Roe JS (2006), Pedeux R (2005), Sekaric P (2007), Pan X (2009), Tang Y (2006), Sen GS (2011), Li Y (2012), Li Y (2012), Gillotin S (2010), Grossman SR (2003), Issaeva N (2004), Kitagawa M (2008), Sabbatini P (2002), Burge S (2009), Zilfou JT (2001), Issaeva N (2004), Issaeva N (2004), Feng H (2009), Feng H (2009), Lill NL (1997), Dornan D (2004), Dornan D (2004), Di Agostino S (2006), Wells M (2008), Fath DM (2006), Kobet E (2000), Costanzo A (2002), Kumazawa T (2011), Borger DR (2006), Cui D (2013), Borger DR (2006), Lee SJ (2013), Tang HY (2006), Lin C (2011), Choi WI (2014), Ding G (2013), Kim MK (2013), Ali A (2013), Wu G (2014), Mizuguchi Y (2012), Sinha S (2012), Sinha S (2012), Her YR (2013), Her YR (2013), Wu SY (2009), Wu SY (2009), Liu L (1999), Sakaguchi K (1998), Harrod R (2003), Gu W (1997), Teufel DP (2007), Mantovani F (2007), Mantovani F (2007), Dornan D (2003), Dornan D (2003), Dornan D (2003), Dornan D (2003), Dornan D (2003), MacPartlin M (2005), Mujtaba S (2004), Wang YH (2003), Chen H (1999), Tang Z (2013), Graczyk A (2013), Graczyk A (2013), Chan HM (2001), Thomas MC (2005), Miller Jenkins LM (2015), Miller Jenkins LM (2015), Koh DI (2014), Koh DI (2014), Koh DI (2014), Li H (2015), Chen LF (2005), Shi D (2016), Wright DG (2016), Zhang X (2016), Procopio MG (2015), Tong Q (2015)	95
SUZ12	0	DNMT1	5	affinity chromatography technology	Xu B (2011)	1
NFATC2	1	EP300	36	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Garcia-Rodriguez C (1998), Garcia-Rodriguez C (1998), Gabriel CH (2016), Gabriel CH (2016)	4
EED	1	RBBP4	3	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Pasini D (2004), Cao R (2004), Hein MY (2015), Hauri S (2016), Hauri S (2016)	5
JUN	0	TRIM33	4	affinity chromatography technology	Li X (2015)	1
LOXL2	5	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Herranz N (2012), Herranz N (2012)	2
RNF2	1	HIST3H3	0	affinity chromatography technology, unspecified method	Trojer P (2011), Vermeulen M (2010)	2
ELAVL1	0	TXNIP	2	affinity chromatography technology	Abdelmohsen K (2009)	1
ZFPM2	4	MTA1	3	affinity chromatography technology, affinity chromatography technology	Roche AE (2008), Roche AE (2008)	2
ITGB3BP	0	KDM1A	2	two hybrid	Weimann M (2013)	1
SOX2	4	KPNA4	0	affinity chromatography technology	Cox JL (2013)	1
HIC1	1	SIRT1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Stankovic-Valentin N (2007), Dehennaut V (2012), Dehennaut V (2012), Chen WY (2005), Dehennaut V (2013)	5
RNF2	1	ELAVL1	0	affinity chromatography technology	Cao Q (2014)	1
PHF20L1	4	HDAC2	1	affinity chromatography technology	Huttlin EL (2017)	1
KHDRBS2	1	SYNCRIP	6	affinity chromatography technology, biochemical	Jeronimo C (2007), Wan C (2015)	2
SYNCRIP	6	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
SUMO2	0	HDAC1	4	pull down	Ouyang J (2009)	1
TRIM25	5	MDM2	2	affinity chromatography technology	Choudhury NR (2017)	1
CHD5	12	MBD2	1	affinity chromatography technology	Quan J (2014)	1
NANOG	0	MTA1	3	affinity chromatography technology	Oliviero G (2015)	1
CPNE5	4	GATAD2A	3	affinity chromatography technology	Huttlin EL (2017)	1
MDM2	2	JUN	0	pull down	Miyamoto-Sato E (2010)	1
KPNA3	0	KPNA4	0	biochemical	Wan C (2015)	1
DNMT3B	3	RBBP7	1	affinity chromatography technology	Cai Y (2014)	1
ZMYND8	5	MTA2	1	affinity chromatography technology	Hein MY (2015)	1
CHD4	22	CHD5	12	affinity chromatography technology, affinity chromatography technology	Rahman S (2011), Quan J (2014)	2
TRIM25	5	FAM219A	1	affinity chromatography technology	Choudhury NR (2017)	1
NFATC2	1	RBBP4	3	affinity chromatography technology	Gabriel CH (2016)	1
ZMYND8	5	GATAD2B	15	affinity chromatography technology	Hein MY (2015)	1
SOX2	4	MBD2	1	affinity chromatography technology	Cox JL (2013)	1
TRIM25	5	CHD7	22	affinity chromatography technology	Choudhury NR (2017)	1
HIST3H3	0	RBBP7	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method	Campos EI (2010), Campos EI (2010), Campos EI (2010), Yoon HG (2005), Li X (2012)	5
MBD2	1	MTA2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Zhang Y (1999), Feng Q (2001), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Wan C (2015)	6
FOXK2	9	MTA3	3	affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	4
RNF2	1	GATAD2B	15	affinity chromatography technology	Cao Q (2014)	1
ESR1	0	FOXK2	9	affinity chromatography technology, affinity chromatography technology, two hybrid, pull down	Liu Y (2015), Liu Y (2015), Liu Y (2015), Liu Y (2015)	4
MTA1	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Roche AE (2008), Huttlin EL (2015), Huttlin EL (2017), Millard CJ (2016), Hauri S (2016)	6
DLST	3	MTA2	1	affinity chromatography technology	Malty RH (2017)	1
MTA1	3	TSHZ3	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MBD3	4	RBBP7	1	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
SOX2	4	MTA3	3	affinity chromatography technology	Cox JL (2013)	1
DNMT3B	3	UBE2I	0	two hybrid, pull down	Kang ES (2001), Kang ES (2001)	2
DNMT1	5	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Cui S (2011), Cui S (2011), Cai Y (2014), Cai Y (2014), Wan C (2015)	5
UBE2I	0	HIF1A	1	enzymatic study, enzymatic study	Matic I (2008), Bae SH (2004)	2
CDK2AP1	1	MBD2	1	affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015)	2
KPNA3	0	MTA1	3	two hybrid, affinity chromatography technology	Rolland T (2014), Huttlin EL (2015)	2
TCF19	0	MTA1	3	affinity chromatography technology	Huttlin EL (2017)	1
MTA1	3	KRT40	0	two hybrid	Rolland T (2014)	1
LOXL2	5	MTA1	3	affinity chromatography technology	Herranz N (2012)	1
SIN3A	13	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
ZBTB46	7	MTA1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA1	3	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Xue Y (1998), Cui S (2011), Cui S (2011), Chudnovsky Y (2014), Wan C (2015)	6
MTA2	1	UBE3C	5	two hybrid	Wang J (2011)	1
ELAVL1	0	HDAC2	1	affinity chromatography technology	Abdelmohsen K (2009)	1
FOXP1	23	TP53	0	affinity chromatography technology	Li X (2015)	1
ZNF827	2	MTA2	1	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
RBBP7	1	BCL11A	14	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
NFATC2	1	JUN	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nguyen TN (2010), Nguyen TN (2010), Li X (2015), Gabriel CH (2016), Gabriel CH (2016)	5
SOX2	4	CHD7	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Engelen E (2011), Engelen E (2011), Cox JL (2013)	4
GATAD2A	3	KRT40	0	two hybrid	Rolland T (2014)	1
ESR1	0	UBE3C	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Okada M (2015), Okada M (2015), Okada M (2015)	3
SUZ12	0	TRIM25	5	affinity chromatography technology, affinity chromatography technology	Cao Q (2014), Choudhury NR (2017)	2
EP300	36	NANOG	0	affinity chromatography technology	Xie X (2014)	1
ZNF219	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ZEB2	7	HDAC1	4	affinity chromatography technology	Verstappen G (2008)	1
SOX2	4	ZEB2	7	affinity chromatography technology	Cox JL (2013)	1
DNMT1	5	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cai Y (2014), Cai Y (2014), Cai Y (2014)	4
SOX2	4	FOXK2	9	affinity chromatography technology	Cox JL (2013)	1
HDAC2	1	SUZ12	0	biochemical, affinity chromatography technology, biochemical	Havugimana PC (2012), Pasini D (2010), Wan C (2015)	3
ELAVL1	0	UBE4A	2	affinity chromatography technology	Abdelmohsen K (2009)	1
TRIM25	5	UBE3C	5	affinity chromatography technology	Choudhury NR (2017)	1
RNF2	1	CHD3	19	affinity chromatography technology	Cao Q (2014)	1
ATR	6	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Schmidt DR (1999), Li DQ (2010), Li DQ (2010)	3
BCL11B	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Marban C (2007), Joshi P (2013)	5
UBE2I	0	SUZ12	0	pull down, affinity chromatography technology	Riising EM (2008), Riising EM (2008)	2
MBD3L1	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
IKZF1	2	MTA3	3	affinity chromatography technology	Huttlin EL (2017)	1
HDAC2	1	HIST3H3	0	enzymatic study	Shi Y (2003)	1
KDM1A	2	NR2C2	0	affinity chromatography technology, two hybrid	Cui S (2011), Weimann M (2013)	2
CDK2AP1	1	CHD4	22	affinity chromatography technology	Hein MY (2015)	1
JUN	0	HDAC1	4	affinity chromatography technology	Tenbrock K (2006)	1
ELAVL1	0	MTA2	1	affinity chromatography technology	Abdelmohsen K (2009)	1
MTA2	1	CHD3	19	biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Zhang Y (1999), Feng Q (2001), Wang Y (2009), Havugimana PC (2012), Wan C (2015)	5
FOXK2	9	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Li X (2015), Ji Z (2014), Ji Z (2014), Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	7
RBBP4	3	NR2C2	0	affinity chromatography technology	Cui S (2011)	1
BCL11A	14	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Joshi P (2013), Huttlin EL (2017)	3
LOXL2	5	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Herranz N (2012), Herranz N (2012)	2
TRIM25	5	L3MBTL2	1	affinity chromatography technology	Choudhury NR (2017)	1
ZNF827	2	RBBP7	1	affinity chromatography technology, affinity chromatography technology, imaging technique	Conomos D (2014), Conomos D (2014), Conomos D (2014)	3
SOX2	4	CHD3	19	affinity chromatography technology	Cox JL (2013)	1
L3MBTL2	1	RNF2	1	affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Trojer P (2011), Trojer P (2011), Trojer P (2011), Trojer P (2011), Gao Z (2012), Cao Q (2014), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	9
FOXK2	9	MTA2	1	affinity chromatography technology, affinity chromatography technology, biochemical	Shan L (2016), Shan L (2016), Shan L (2016)	3
ZNF827	2	GATAD2A	3	affinity chromatography technology	Conomos D (2014)	1
HDAC2	1	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, genetic interference	Hakimi MA (2002), Hakimi MA (2003), Hakimi MA (2003), Hakimi MA (2003), Tong JK (1998), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Zibetti C (2010), Wang Y (2009), Li Q (2011), Cui S (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Wong AS (2016)	17
KDM1A	2	TP53	0	affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study	Tsai WW (2008), Tsai WW (2008), Huang J (2007), Huang J (2007), Huang J (2007), Huang J (2007), Huang J (2007)	7
MAGEA11	1	EP300	36	pull down, affinity chromatography technology	Askew EB (2010), Askew EB (2010)	2
MDM2	2	MTA1	3	affinity chromatography technology, affinity chromatography technology	Li DQ (2009), Li DQ (2009)	2
TXNIP	2	MBD3	4	affinity chromatography technology	Huttlin EL (2017)	1
RBBP4	3	ZNF512B	2	affinity chromatography technology	Hauri S (2016)	1
RNF2	1	KDM1A	2	affinity chromatography technology	Cao Q (2014)	1
NFATC2	1	KDM1A	2	affinity chromatography technology	Gabriel CH (2016)	1
MBD3	4	MTA1	3	pull down, affinity chromatography technology, biochemical	Yildirim O (2011), Cui S (2011), Wan C (2015)	3
NR2C1	0	NR2C2	0	affinity chromatography technology, biochemical, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
MTA1	3	BLOC1S1	0	two hybrid, pull down, affinity chromatography technology, pull down, two hybrid	Mishra SK (2003), Mishra SK (2003), Mishra SK (2003), Mishra SK (2003), Mishra SK (2003)	5
HIST3H3	0	RBBP4	3	affinity chromatography technology, unspecified method, unspecified method	Campos EI (2010), Li X (2012), Vermeulen M (2010)	3
MBD2	1	GATAD2A	3	affinity chromatography technology, pull down, pull down, biochemical, affinity chromatography technology	Brackertz M (2002), Brackertz M (2002), Brackertz M (2006), Wan C (2015), Huttlin EL (2017)	5
MTA2	1	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Cui S (2011), Wan C (2015)	4
CHD4	22	RBBP7	1	affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Havugimana PC (2012), Huttlin EL (2015), Quan J (2014), Huttlin EL (2017)	7
TRIM25	5	ESR1	0	affinity chromatography technology, pull down, enzymatic study	Nakajima A (2007), Nakajima A (2007), Nakajima A (2007)	3
EED	1	SUZ12	0	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Pasini D (2004), Cao R (2004), Margueron R (2008), Margueron R (2008), Shen X (2008), Pasini D (2008), Sarma K (2008), Pasini D (2010), Pasini D (2010), Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014), Hein MY (2015), Chan YS (2013), Huttlin EL (2017), Zhang H (2016), Zhang H (2016), Wang X (2017), Hauri S (2016), Hauri S (2016)	22
MTA2	1	KDM1A	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Wang Y (2009), Li Q (2011), Cui S (2011)	5
ESR1	0	RBBP4	3	pull down, affinity chromatography technology	Creekmore AL (2008), Tarallo R (2011)	2
PHF20L1	4	MBD2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA3	3	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Hein MY (2015)	2
TRIM25	5	NOTCH2NL	1	affinity chromatography technology	Choudhury NR (2017)	1
CHD3	19	GATAD2A	3	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
SUMO2	0	CHD3	19	two hybrid, two hybrid, two hybrid, unspecified method	Stelzl U (2005), Vinayagam A (2011), Goehler H (2004), Garvin AJ (2013)	4
MTA3	3	GATAD2A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Wan C (2015), Huttlin EL (2017)	3
EED	1	HDAC2	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), Cao Q (2014)	6
MDM2	2	SUZ12	0	affinity chromatography technology, affinity chromatography technology	Wienken M (2016), Wienken M (2016)	2
PHF20L1	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ELAVL1	0	HIF1A	1	affinity chromatography technology, unspecified method	Galban S (2008), Galban S (2008)	2
BCL11B	3	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	4
SOX2	4	GATAD2B	15	affinity chromatography technology	Engelen E (2011)	1
MBD3	4	JUN	0	affinity chromatography technology, pull down, pull down	Aguilera C (2011), Aguilera C (2011), Aguilera C (2011)	3
LOXL2	5	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Herranz N (2012), Herranz N (2012)	2
JUN	0	ESR1	0	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Teyssier C (2001), Baron S (2007), Ruiz ML (2013), Ruiz ML (2013)	4
SIRT1	3	KPNA3	0	affinity chromatography technology	Law IK (2009)	1
SOX2	4	HDAC1	4	affinity chromatography technology	Engelen E (2011)	1
GATAD2B	15	MTA2	1	affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Feng Q (2002), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	5
TRIM33	4	UBE2I	0	affinity chromatography technology, affinity chromatography technology	Fattet L (2013), Ikeuchi Y (2014)	2
ELAVL1	0	ZBTB46	7	affinity chromatography technology	Abdelmohsen K (2009)	1
MBD2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2001), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
NR2C1	0	MTA2	1	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
IKZF1	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Kim J (1999), Kim J (1999)	3
NFATC2	1	MTA2	1	affinity chromatography technology	Gabriel CH (2016)	1
ZMYND8	5	MBD2	1	affinity chromatography technology	Hein MY (2015)	1
NTRK1	1	SIN3A	13	affinity chromatography technology	Emdal KB (2015)	1
LMO4	1	ESR1	0	pull down, pull down, affinity chromatography technology	Singh RR (2005), Singh RR (2005), Singh RR (2005)	3
NTRK1	1	BAG6	2	affinity chromatography technology	Emdal KB (2015)	1
TCF19	0	MBD3	4	affinity chromatography technology	Huttlin EL (2017)	1
BCL11B	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	3
L3MBTL2	1	HIST3H3	0	affinity chromatography technology	Trojer P (2011)	1
IKZF1	2	FOXP1	23	affinity chromatography technology, affinity chromatography technology, pull down	Bond J (2016), Bond J (2016), Bond J (2016)	3
RNF2	1	VIM	0	affinity chromatography technology	Cao Q (2014)	1
MBD3L1	0	BCL11A	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
IKZF1	2	MTA2	1	affinity chromatography technology	Huttlin EL (2017)	1
ESR1	0	UBE2I	0	two hybrid, enzymatic study	Kobayashi S (2004), Sentis S (2005)	2
EED	1	MTA1	3	affinity chromatography technology	Cao Q (2014)	1
KDM1A	2	MTA3	3	affinity chromatography technology, pull down, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Li Q (2011)	3
ZEB2	7	MTA1	3	affinity chromatography technology	Verstappen G (2008)	1
EED	1	KDM1A	2	affinity chromatography technology	Cao Q (2014)	1
MTA3	3	MTA1	3	biochemical	Wan C (2015)	1
ZNF827	2	CHD4	22	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
NFATC2	1	MTA1	3	affinity chromatography technology	Gabriel CH (2016)	1
SIN3A	13	TP53	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Murphy M (1999), Murphy M (1999), Murphy M (1999), Zilfou JT (2001)	4
HDAC1	4	ZNF827	2	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Conomos D (2014)	2
HDAC2	1	DNMT1	5	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rountree MR (2000), Rountree MR (2000), Myant K (2008), Cui S (2011), Cai Y (2014), Cai Y (2014)	6
PHF20L1	4	MTA1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC1	4	MDM2	2	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Ito A (2002), Ito A (2002), Gaughan L (2005), Gaughan L (2005)	5
SUZ12	0	RNF2	1	affinity chromatography technology	Cao Q (2014)	1
MBD3L1	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
MTA1	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, x-ray crystallography, unspecified method, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology	Yao YL (2003), Roche AE (2008), Cui S (2011), Cui S (2011), Rolland T (2014), Huttlin EL (2015), Alqarni SS (2014), Alqarni SS (2014), Alqarni SS (2014), Wan C (2015), Huttlin EL (2017), Millard CJ (2016), Millard CJ (2016), Millard CJ (2016), Hauri S (2016)	15
RBBP4	3	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Huttlin EL (2017), Hauri S (2016)	4
TP53	0	CCNH	3	far western blotting, affinity chromatography technology	Schneider E (1998), Schneider E (1998)	2
MBD3L2	0	POLD3	0	pull down	Jin SG (2005)	1
HDAC2	1	HIF1A	1	pull down, imaging technique	Mahon PC (2001), Chen TC (2014)	2
CDK2AP1	1	CHD3	19	affinity chromatography technology	Hein MY (2015)	1
TP53	0	ESR1	0	pull down, affinity chromatography technology, affinity chromatography technology	Liu G (2000), Duong V (2007), Saxena R (2016)	3
ELAVL1	0	RBBP4	3	affinity chromatography technology	Abdelmohsen K (2009)	1
UBE2I	0	BCL11A	14	enzymatic study	Kuwata T (2008)	1
GATAD2B	15	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Huttlin EL (2017)	5
SUZ12	0	HDAC1	4	affinity chromatography technology, biochemical	Cao Q (2014), Wan C (2015)	2
NTRK1	1	KPNA3	0	affinity chromatography technology	Emdal KB (2015)	1
NFATC2	1	HDAC1	4	affinity chromatography technology	Gabriel CH (2016)	1
MTA1	3	ESR1	0	affinity chromatography technology, pull down, pull down, pull down, pull down, pull down	Kumar R (2002), Kumar R (2002), Kumar R (2002), Mazumdar A (2001), Singh RR (2006), Mishra SK (2003)	6
HSF1	1	CHD3	19	affinity chromatography technology	Khaleque MA (2008)	1
ZNF219	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ATR	6	HDAC2	1	affinity chromatography technology, affinity chromatography technology, biochemical	Schmidt DR (1999), Schmidt DR (1999), Schmidt DR (1999)	3
MTA1	3	LMO4	1	pull down, pull down, affinity chromatography technology	Singh RR (2005), Singh RR (2005), Singh RR (2005)	3
ELAVL1	0	SUMO2	0	affinity chromatography technology	Abdelmohsen K (2009)	1
HDAC1	4	POLD3	0	affinity chromatography technology	Cui S (2011)	1
CHD4	22	NR2C2	0	affinity chromatography technology	Cui S (2011)	1
CHD3	19	TP53	0	two hybrid, two hybrid	Minty A (2000), Goehler H (2004)	2
TSHZ3	6	KRT40	0	two hybrid	Rolland T (2014)	1
ZNF219	3	ZNF521	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NTRK1	1	NELFCD	3	affinity chromatography technology	Emdal KB (2015)	1
MBD3L1	0	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
CHD4	22	HIST3H3	0	unspecified method, unspecified method, affinity chromatography technology	Morra R (2012), Vermeulen M (2010), Quan J (2014)	3
ZNF219	3	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
EP300	36	SIRT1	3	affinity chromatography technology, affinity chromatography technology	Bouras T (2005), Bourguignon LY (2009)	2
CDK7	0	TP53	0	enzymatic study, affinity chromatography technology, enzymatic study, pull down	Ko LJ (1997), Schneider E (1998), Lu H (1997), Lu H (1997)	4
TP53	0	TXNIP	2	affinity chromatography technology	Suh HW (2013)	1
L3MBTL2	1	MTA2	1	affinity chromatography technology	Huttlin EL (2017)	1
MTA1	3	LZTS2	4	two hybrid	Rolland T (2014)	1
GPR183	1	TSHZ3	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
EED	1	DNMT1	5	affinity chromatography technology, imaging technique, affinity chromatography technology	Vire E (2006), Vire E (2006), OHagan HM (2011)	3
NTRK1	1	UBE4A	2	affinity chromatography technology	Emdal KB (2015)	1
FOXK2	9	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
PARK7	0	UBE2I	0	two hybrid	Junn E (2005)	1
HIF1A	1	TP53	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Chen D (2003), Ravi R (2000), Hansson LO (2002), An WG (1998), An WG (1998), Chowdhury AR (2017), Chowdhury AR (2017), Suzuki H (2001), Sanchez-Puig N (2005)	9
ESR1	0	BLOC1S1	0	pull down, affinity chromatography technology	Mishra SK (2003), Mishra SK (2003)	2
BCL11A	14	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Huttlin EL (2015), Huttlin EL (2017)	3
ELAVL1	0	ZNF521	3	affinity chromatography technology	Abdelmohsen K (2009)	1
GATAD2B	15	CHD3	19	affinity chromatography technology, biochemical, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	3
MTA1	3	UBE2I	0	affinity chromatography technology, pull down	Cong L (2011), Cong L (2011)	2
MBD3L1	0	CHD4	22	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DLST	3	TP53	0	affinity chromatography technology	Malty RH (2017)	1
NR2C1	0	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
SAT1	0	CHD3	19	two hybrid	Stelzl U (2005)	1
BCL11B	3	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	5
ZNF219	3	ZNF423	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RBBP7	1	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Kuzmichev A (2002), Nakamura T (2002), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
TP53	0	MTA2	1	pull down, affinity chromatography technology, pull down	Yao YL (2003), Luo J (2000), Luo J (2000)	3
MTA1	3	ZNF423	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC1	4	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	6
IKZF1	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Kim J (1999), Kim J (1999)	2
ZNF219	3	MTA2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MDM2	2	HIF1A	1	pull down, affinity chromatography technology, enzymatic study, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Chen D (2003), Chen D (2003), Ravi R (2000), Lee YM (2009), Lee YM (2009), Lee YM (2009), Maroni P (2014), Amelio I (2015), Yoo YG (2004), LaRusch GA (2007), LaRusch GA (2007), Nieminen AL (2005)	12
RBBP4	3	ZFPM1	8	pull down, x-ray crystallography, x-ray crystallography	Lejon S (2011), Lejon S (2011), Lejon S (2011)	3
MTA1	3	GATAD2B	15	biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
DNMT1	5	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
BCL11A	14	MBD3	4	affinity chromatography technology	Cismasiu VB (2005)	1
HDAC1	4	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Yao YL (2003), Grozinger CM (1999), Tong JK (1998), Tong JK (1998), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Terhune SS (2010), Polo SE (2010), Xue Y (1998), Xue Y (1998), Xue Y (1998), Kwintkiewicz J (2011), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Quan J (2014), Wan C (2015), Hein MY (2015), Weiss K (2016), Huttlin EL (2017)	28
CCNH	3	ESR1	0	affinity chromatography technology	Talukder AH (2003)	1
MBD2	1	GATAD2B	15	pull down, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Brackertz M (2002), Feng Q (2002), Feng Q (2002), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	6
L3MBTL2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
MTA1	3	SIRT1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SH3GL1	3	MTA1	3	two hybrid	Rolland T (2014)	1
CHD5	12	MTA2	1	affinity chromatography technology, affinity chromatography technology, biochemical	Quan J (2014), Quan J (2014), Wan C (2015)	3
HDAC1	4	NR2C2	0	affinity chromatography technology	Cui S (2011)	1
HIST3H3	0	MTA2	1	unspecified method	Li X (2012)	1
NTRK1	1	MTA1	3	affinity chromatography technology	Emdal KB (2015)	1
MBD3	4	HDAC1	4	affinity chromatography technology, biochemical, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Sakai H (2002), Zhang Y (1999), Zhang Y (1999), Saito M (2002), Noh EJ (2009), Noh EJ (2009), Le Guezennec X (2006), Humphrey GW (2001), Sun JM (2007), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	16
SOX2	4	MTA2	1	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Engelen E (2011)	2
TP53	0	MNAT1	0	pull down, affinity chromatography technology	Ko LJ (1997), Ko LJ (1997)	2
MBD2	1	DNMT1	5	affinity chromatography technology	Tatematsu KI (2000)	1
HIC1	1	SUZ12	0	affinity chromatography technology	Boulay G (2012)	1
MBD3L1	0	ZNF521	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD5	12	MTA3	3	affinity chromatography technology	Quan J (2014)	1
NANOG	0	MTA3	3	affinity chromatography technology	Oliviero G (2015)	1
ELAVL1	0	SIRT1	3	affinity chromatography technology	Abdelmohsen K (2009)	1
CDK2AP1	1	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015), Hauri S (2016)	3
DNMT1	5	HIC1	1	affinity chromatography technology, affinity chromatography technology	Zeng S (2016), Zeng S (2016)	2
RBBP7	1	ZNF512B	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA1	3	IKZF1	2	two hybrid, affinity chromatography technology	Rolland T (2014), Huttlin EL (2017)	2
MDM2	2	HIST3H3	0	pull down, enzymatic study, affinity chromatography technology	Chen L (2010), Chen L (2010), Chen L (2010)	3
MBD3	4	MBD3L2	0	two hybrid, two hybrid, pull down, pull down	Jin SG (2005), Jin SG (2005), Jin SG (2005), Jin SG (2005)	4
EED	1	SYNCRIP	6	affinity chromatography technology	Cao Q (2014)	1
RNF2	1	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Calao M (2012), Wen W (2013), Wen W (2013)	3
MTA2	1	RBBP7	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Yao YL (2003), Zhang Y (1999), Feng Q (2001), Wang Y (2009), Fu J (2011), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Brasen C (2017), Brasen C (2017), Hauri S (2016)	11
EP300	36	ZEB2	7	affinity chromatography technology	Weng Q (2012)	1
TRIM25	5	CHD3	19	affinity chromatography technology	Choudhury NR (2017)	1
NTRK1	1	MTA2	1	affinity chromatography technology	Emdal KB (2015)	1
DNMT1	5	HIST3H3	0	affinity chromatography technology	Qin W (2015)	1
SOX2	4	ZMYND8	5	affinity chromatography technology	Cox JL (2013)	1
MTA1	3	EP300	36	affinity chromatography technology	Gururaj AE (2006)	1
NFATC2	1	GATAD2B	15	affinity chromatography technology	Gabriel CH (2016)	1
TP53	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Wang C (2005), Dohi Y (2008), Jin W (2008), Lei Q (2006), Wu Y (2001), Wu Y (2001), Luo J (2000), Juan LJ (2000), Juan LJ (2000), Juan LJ (2000), Murphy M (1999), Insinga A (2004), Sun JM (2007), Yu XY (2010), Sinha S (2010), Sinha S (2010), Li Y (2012), Di Agostino S (2006), Pavithra L (2009), Pavithra L (2009), Luo J (2000), Chen TC (2014), Park EK (2015), Park EK (2015), Park EK (2015)	26
ZFPM2	4	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Roche AE (2008), Roche AE (2008)	2
NFATC2	1	VIM	0	two hybrid	Stelzl U (2005)	1
NANOG	0	CDK2AP1	1	affinity chromatography technology	Oliviero G (2015)	1
DNMT3B	3	CHD4	22	affinity chromatography technology, imaging technique	Cai Y (2014), Cai Y (2014)	2
TRIM25	5	NACC2	2	affinity chromatography technology	Choudhury NR (2017)	1
MTA3	3	MTA2	1	affinity chromatography technology, biochemical	Bantscheff M (2011), Wan C (2015)	2
CHD5	12	MBD3	4	affinity chromatography technology, affinity chromatography technology	Quan J (2014), Quan J (2014)	2
JUN	0	UBE2I	0	two hybrid, enzymatic study	Goettlicher M (1996), Muller S (2000)	2
TP53	0	VIM	0	affinity chromatography technology	Horikawa I (2014)	1
SIRT1	3	ESR1	0	affinity chromatography technology	Elangovan S (2011)	1
HDAC2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Adenuga D (2010), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016)	9
FAM219A	1	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
NANOG	0	SOX2	4	affinity chromatography technology	Oliviero G (2015)	1
ZNF827	2	RBBP4	3	affinity chromatography technology	Conomos D (2014)	1
ZNF219	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SIRT1	3	EED	1	affinity chromatography technology	OHagan HM (2011)	1
TP53	0	RBBP4	3	affinity chromatography technology	Fogeron ML (2013)	1
ELAVL1	0	CDK2AP1	1	affinity chromatography technology	Abdelmohsen K (2009)	1
MBD3	4	MTA2	1	affinity chromatography technology, biochemical, pull down, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Sakai H (2002), Zhang Y (1999), Zhang Y (1999), Saito M (2002), Feng Q (2001), Wang Y (2009), Havugimana PC (2012), Wan C (2015)	8
CHD5	12	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Quan J (2014), Huttlin EL (2017)	2
BCL11A	14	MTA2	1	affinity chromatography technology	Cismasiu VB (2005)	1
TRIM25	5	SIN3A	13	affinity chromatography technology	Choudhury NR (2017)	1
CHD4	22	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
SUZ12	0	RBBP4	3	pull down, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cao R (2004), Cao R (2004), Havugimana PC (2012), Pasini D (2010), Cao Q (2014), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	8
GATAD2A	3	MTA1	3	biochemical, affinity chromatography technology	Wan C (2015), Huttlin EL (2017)	2
SIN3A	13	RBBP4	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hassig CA (1997), Zhang Y (1998), Nakamura T (2002), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Bantscheff M (2011), Hauri S (2016)	8
FAM219A	1	MBD3	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
EED	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), Hein MY (2015)	4
TP53	0	HDAC2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li P (2010), Insinga A (2004), Sun JM (2007), Tian B (2011), Adenuga D (2010), Brandl A (2012)	6
ZMYND8	5	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
RNF2	1	MTA2	1	affinity chromatography technology	Cao Q (2014)	1
NANOG	0	SIN3A	13	affinity chromatography technology	Oliviero G (2015)	1
MBD3L1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
ZFPM2	4	MTA3	3	affinity chromatography technology	Roche AE (2008)	1
CPNE5	4	CHD4	22	affinity chromatography technology	Huttlin EL (2017)	1
KPNA4	0	TP53	0	affinity chromatography technology, pull down	Marchenko ND (2010), Marchenko ND (2010)	2
DNMT1	5	POLD3	0	affinity chromatography technology	Cui S (2011)	1
CHD5	12	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Quan J (2014), Quan J (2014), Wan C (2015), Huttlin EL (2017)	4
ESR1	0	SUZ12	0	affinity chromatography technology	Okada M (2015)	1
HDAC1	4	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tong JK (1998), Tong JK (1998), Kuzmichev A (2002), Sun JM (2007), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Xue Y (1998), Havugimana PC (2012), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	12
SIRT1	3	HDAC2	1	affinity chromatography technology	Law IK (2009)	1
HIST3H3	0	SIN3A	13	unspecified method	Vermeulen M (2010)	1
CDK2AP1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	6
CPNE5	4	MBD3	4	affinity chromatography technology	Huttlin EL (2017)	1
MBD3L1	0	MBD3	4	two hybrid, two hybrid, pull down, affinity chromatography technology	Jiang CL (2004), Jiang CL (2004), Jiang CL (2004), Jiang CL (2004)	4
HDAC2	1	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hakimi MA (2003), Tong JK (1998), Tong JK (1998), Hakimi MA (2002), Sun JM (2007), Xue Y (1998), Xue Y (1998), Xue Y (1998), Havugimana PC (2012), Joshi P (2013)	10
HDAC2	1	BCL11A	14	affinity chromatography technology	Joshi P (2013)	1
MTA2	1	ESR1	0	pull down, pull down, affinity chromatography technology	Cui Y (2006), Cui Y (2006), Cui Y (2006)	3
ESR1	0	MDM2	2	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, pull down	Liu G (2000), Kinyamu HK (2003), Duong V (2007), Duong V (2007), Duong V (2007), Duong V (2007), Saji S (2001), Saji S (2001)	8
CDK2AP1	1	MTA2	1	affinity chromatography technology	Hein MY (2015)	1
MBD3L1	0	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MBD3L1	0	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MBD3L2	0	HDAC2	1	pull down	Jin SG (2005)	1
HDAC2	1	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Hakimi MA (2003), Schmidt DR (1999), Schmidt DR (1999), Tong JK (1998), Tong JK (1998), Tong JK (1998), ONeill DW (2000), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Xue Y (1998), Xue Y (1998), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	17
RBBP7	1	ZNF521	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MAGEA11	1	MTA1	3	two hybrid	Rolland T (2014)	1
ATR	6	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Schmidt DR (1999), Schmidt DR (1999), Schmidt DR (1999)	3
MBD3L1	0	ZNF219	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
LOXL2	5	MTA2	1	affinity chromatography technology	Herranz N (2012)	1
UBE2I	0	IKZF1	2	two hybrid, two hybrid	Rual JF (2005), Rolland T (2014)	2
EED	1	DNMT3B	3	affinity chromatography technology, imaging technique, affinity chromatography technology	Vire E (2006), Vire E (2006), OHagan HM (2011)	3
CPNE5	4	MTA1	3	affinity chromatography technology	Huttlin EL (2017)	1
DNMT1	5	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Robertson KD (2000), Achour M (2008), Achour M (2008), Kimura H (2003), Zhang Q (2005), Myant K (2008), Schnekenburger M (2007), Kang KA (2012), Cui S (2011), Cui S (2011), Hervouet E (2010), Cai Y (2014), Cai Y (2014), Yuan K (2016), Yuan K (2016)	15
KDM1A	2	UBE3C	5	biochemical	Havugimana PC (2012)	1
KDM1A	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li Q (2011), Cui S (2011), Cui S (2011)	3
NTRK1	1	VIM	0	affinity chromatography technology	Emdal KB (2015)	1
NAA10	9	MTA1	3	affinity chromatography technology	Yoo YG (2006)	1
IKZF1	2	GATAD2A	3	affinity chromatography technology	Huttlin EL (2017)	1
EP300	36	BAG6	2	affinity chromatography technology	Jiang W (2011)	1
MTA1	3	NOTCH2NL	1	two hybrid	Rolland T (2014)	1
NANOG	0	MTA2	1	affinity chromatography technology	Oliviero G (2015)	1
DNMT3B	3	HDAC2	1	affinity chromatography technology, pull down, affinity chromatography technology	Geiman TM (2004), Geiman TM (2004), Cai Y (2014)	3
UBE2I	0	HSF1	1	enzymatic study	Mohideen F (2009)	1
IKZF1	2	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
ZNF827	2	CHD3	19	affinity chromatography technology	Conomos D (2014)	1
MTA2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Zhang Y (1999), Banach-Orlowska M (2009), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Wang Y (2009), Fu J (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	14
MBD3L1	0	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
FOXP1	23	GATAD2B	15	affinity chromatography technology	Chokas AL (2010)	1
TRIM25	5	HIC1	1	affinity chromatography technology	Choudhury NR (2017)	1
NACC2	2	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Xuan C (2013), Xuan C (2013)	2
HIF1A	1	SAT1	0	pull down	Baek JH (2007)	1
MTA1	3	JUN	0	pull down	Li DQ (2011)	1
MBD3L1	0	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TXNIP	2	MTA1	3	affinity chromatography technology	Huttlin EL (2017)	1
CHD5	12	RBBP4	3	affinity chromatography technology	Quan J (2014)	1
EED	1	CHD4	22	affinity chromatography technology	Cao Q (2014)	1
HDAC1	4	KPNA4	0	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015)	2
ZBTB46	7	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA2	1	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, biochemical, x-ray crystallography, affinity chromatography technology	Yao YL (2003), Zhang Y (1999), Banach-Orlowska M (2009), Pflum MK (2001), Feng Q (2001), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Wan C (2015), Brasen C (2017), Brasen C (2017), Brasen C (2017), Hauri S (2016)	13
FAM219A	1	MTA1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
GPR183	1	MTA1	3	two hybrid	Stelzl U (2005)	1
HDAC1	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Ng HH (1999), Zhang Y (1999), Zhang Y (1997), Banach-Orlowska M (2009), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Yeh HH (2015), Yeh HH (2015), Huttlin EL (2017), Hauri S (2016)	19
RNF2	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Cao Q (2014)	2
SOX2	4	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
RBBP4	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Nicolas E (2001), Nicolas E (2001), Grozinger CM (1999), You A (2001), Hassig CA (1997), Hassig CA (1997), Ng HH (1999), Zhang Y (1999), Zhang Y (2002), Hassig CA (1998), Zhang Y (1997), Banach-Orlowska M (2009), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	35
HDAC1	4	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Yao YL (2003), You A (2001), Zhang Y (1999), Zhang Y (1999), Yasui D (2002), Banach-Orlowska M (2009), Banach-Orlowska M (2009), Cui Y (2006), Pflum MK (2001), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Zhang Y (1998), Terhune SS (2010), Opsahl JA (2010), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Kristensen AR (2012), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	27
MBD2	1	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ng HH (1999), Feng Q (2001), Hauri S (2016)	3
SIRT1	3	CHD3	19	affinity chromatography technology	Kim JE (2008)	1
ATR	6	HDAC1	4	affinity chromatography technology	Schmidt DR (1999)	1
SUZ12	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Pasini D (2010), Cao Q (2014), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
CHD4	22	POLD3	0	affinity chromatography technology	Cui S (2011)	1
UBE2I	0	TP53	0	two hybrid, two hybrid, two hybrid, enzymatic study, two hybrid, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Minty A (2000), Gallagher WM (1999), Shen Z (1996), Bernier-Villamor V (2002), Wang J (2008), Spektor TM (2011), Jakobs A (2007), Mohideen F (2009), Lin JY (2004), Bennett RL (2012), Heo KS (2013), Morimoto M (2003), Rodriguez MS (1999), Muller S (2000), Fernandez-Lloris R (2006), Mohan RD (2007), Brandt M (2013), Weger S (2005)	18
CPNE5	4	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
SOX2	4	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
EP300	36	HIF1A	1	affinity chromatography technology, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, fluorescent resonance energy transfe, pull down, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down	Lando D (2002), Freedman SJ (2002), Lewis MD (2004), Matt T (2004), Sang N (2002), Luo W (2010), Freedman SJ (2003), Bodily JM (2011), Lee YM (2009), Lee YM (2009), Lee YM (2009), Kung AL (2004), Kung AL (2004), Kung AL (2004), Land SC (2007), Zhang Y (2010), Zhang Y (2010), Fath DM (2006), Fath DM (2006), Lee SJ (2013), Wang D (2014), Kaluz S (2006), Kaluz S (2006), Kaluz S (2006), Shin DH (2008), Shin DH (2008), Wang Y (2012), Huang C (2009), Hewitson KS (2002), Cook KM (2009), Cook KM (2009), Hubbi ME (2012), Kim SY (2014), Sang N (2003), Sang N (2003), Sang N (2003), Yasinska IM (2003), Na YR (2013), Na YR (2013), Mendonca DB (2011), Arany Z (1996), Arany Z (1996), Chen R (2012), Li SH (2008), Galbraith MD (2013), Chen Z (2014), Li Q (2012), Geng H (2012), Geng H (2012), Kato H (2004), Lim JH (2010), Kyle HF (2015), Kyle HF (2015), Rath S (2016), Kimura M (2008), Dubey R (2013)	56
FAM219A	1	MTA2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SUMO2	0	MTA2	1	pull down	Ouyang J (2009)	1
ESR1	0	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Garcia-Bassets I (2007), Garcia-Bassets I (2007)	2
KPNA3	0	RBBP4	3	pull down	Tsujii A (2015)	1
RBBP7	1	CHD5	12	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Quan J (2014), Quan J (2014), Huttlin EL (2017)	4
FOXK2	9	TP53	0	affinity chromatography technology	Li X (2015)	1
MTA1	3	UBE4A	2	affinity chromatography technology	Zang HL (2017)	1
BCL11B	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Marban C (2007), Joshi P (2013)	7
NTRK1	1	GATAD2B	15	affinity chromatography technology	Emdal KB (2015)	1
TP53	0	RBBP7	1	affinity chromatography technology	Fogeron ML (2013)	1
CDK2AP1	1	MBD3	4	affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015)	2
HDAC1	4	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (1999), Koipally J (2002), Kim J (1999), Kim J (1999), Joshi P (2013)	5
CHD3	19	MBD3	4	biochemical	Havugimana PC (2012)	1
ZNF219	3	MTA1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MBD3L2	0	MTA2	1	pull down	Jin SG (2005)	1
RBBP7	1	FOXK2	9	affinity chromatography technology, affinity chromatography technology, pull down	Huttlin EL (2015), Huttlin EL (2017), Shan L (2016)	3
ESR1	0	ZNF512B	2	affinity chromatography technology	Tarallo R (2011)	1
SAT1	0	TP53	0	two hybrid	Stelzl U (2005)	1
MTA2	1	GATAD2A	3	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
HDAC1	4	ZNF512B	2	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Huttlin EL (2017)	2
EP300	36	HIST3H3	0	enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Seo SB (2001), Ott M (1999), Thomas MC (2005), Sabari BR (2015), Sabari BR (2015), Yi P (2015)	6
EED	1	GATAD2B	15	affinity chromatography technology	Cao Q (2014)	1
ESR1	0	MBD2	1	imaging technique	Chatagnon A (2010)	1
TRIM25	5	BAG6	2	affinity chromatography technology	Choudhury NR (2017)	1
NR2C1	0	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
MTA3	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Fujita N (2003), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	5
NFATC2	1	CHD4	22	affinity chromatography technology	Gabriel CH (2016)	1
NTRK1	1	RBBP4	3	affinity chromatography technology	Emdal KB (2015)	1
EP300	36	VPS18	4	two hybrid	Wang J (2011)	1
CHD7	22	GATAD2A	3	affinity chromatography technology	Engelen E (2011)	1
UBE2I	0	HIC1	1	enzymatic study, affinity chromatography technology	Stankovic-Valentin N (2007), Dehennaut V (2013)	2
PARK7	0	CHD4	22	affinity chromatography technology	Opsahl JA (2010)	1
MBD3	4	GATAD2A	3	pull down, pull down, biochemical, biochemical, affinity chromatography technology	Brackertz M (2002), Gong Z (2006), Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	5
NR2C1	0	ESR1	0	affinity chromatography technology, pull down	Hu YC (2002), Hu YC (2002)	2
SAT1	0	MTA1	3	two hybrid	Rolland T (2014)	1
MBD3L1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
MBD2	1	MTA1	3	biochemical	Wan C (2015)	1
SIN3A	13	ESR1	0	affinity chromatography technology, affinity chromatography technology	Ellison-Zelski SJ (2009), Zhu P (2006)	2
GATAD2B	15	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Gong Z (2006), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	7
EP300	36	JUN	0	pull down, biochemical, x-ray crystallography, affinity chromatography technology, pull down, enzymatic study, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Campbell KM (2002), Campbell KM (2002), Campbell KM (2002), Subbaramaiah K (2002), Duyndam MC (1999), Wang WM (2011), Deng WG (2004), Deng WG (2004), Cheng SE (2011), Cheng SE (2011), Kim BK (2014), Vries RG (2001), Deng WG (2003), Liu L (2017), Liu L (2017)	15
MTA1	3	NR2C2	0	affinity chromatography technology	Cui S (2011)	1
HDAC2	1	HSF1	1	affinity chromatography technology, affinity chromatography technology	Fritah S (2009), Khaleque MA (2008)	2
TRIM25	5	TRIM33	4	affinity chromatography technology	Choudhury NR (2017)	1
UBE2I	0	CHD3	19	two hybrid	Lee BH (2003)	1
KRTAP10-8	0	NOTCH2NL	1	two hybrid	Rolland T (2014)	1
NFATC2	1	IKZF1	2	affinity chromatography technology, imaging technique, affinity chromatography technology	Gabriel CH (2016), Gabriel CH (2016), Gabriel CH (2016)	3
MTA2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Pflum MK (2001)	2
EP300	36	SUMO2	0	pull down, enzymatic study	Ullmann R (2012), Ullmann R (2012)	2
SUZ12	0	MTA1	3	affinity chromatography technology	Cao Q (2014)	1
NTRK1	1	ELAVL1	0	affinity chromatography technology	Emdal KB (2015)	1
ZMYND8	5	CHD4	22	affinity chromatography technology	Hein MY (2015)	1
EED	1	SIN3A	13	affinity chromatography technology	Cao Q (2014)	1
EP300	36	HSF1	1	affinity chromatography technology	Huang C (2017)	1
ELAVL1	0	ZEB2	7	affinity chromatography technology	Abdelmohsen K (2009)	1
MTA1	3	KPNA4	0	affinity chromatography technology	Huttlin EL (2015)	1
RNF2	1	CHD4	22	affinity chromatography technology	Cao Q (2014)	1
MBD3L2	0	MTA1	3	pull down	Jin SG (2005)	1
KDM1A	2	EP300	36	affinity chromatography technology	Garcia-Bassets I (2007)	1
MTA1	3	ZNF512B	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HIST3H3	0	MBD3	4	unspecified method	Li X (2012)	1
TRIM25	5	SYNCRIP	6	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
MTA1	3	CSNK1G2	1	two hybrid, pull down, affinity chromatography technology, pull down	Mishra SK (2004), Mishra SK (2004), Mishra SK (2004), Mishra SK (2004)	4
ZMYND8	5	RBBP7	1	affinity chromatography technology	Hein MY (2015)	1
ZBTB46	7	MBD3	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ELAVL1	0	CHD4	22	affinity chromatography technology	Abdelmohsen K (2009)	1
NANOG	0	HIST2H3C	0	affinity chromatography technology	Oliviero G (2015)	1
UBE2I	0	KDM1A	2	enzymatic study	Gocke CB (2005)	1
CDK2AP1	1	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
ZNF219	3	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FOXK2	9	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Ji Z (2014), Huttlin EL (2017), Shan L (2016), Shan L (2016), Shan L (2016)	5
HIC1	1	CHD3	19	affinity chromatography technology	Van Rechem C (2010)	1
HDAC1	4	VIM	0	affinity chromatography technology	Terhune SS (2010)	1
EP300	36	MDM2	2	pull down, affinity chromatography technology, biochemical, pull down, pull down, enzymatic study, affinity chromatography technology, biochemical, enzymatic study	Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Matt T (2004), Wang X (2004), Gillotin S (2010), Kobet E (2000), Nihira NT (2017)	9
SUMO2	0	RBBP4	3	pull down	Ouyang J (2009)	1
DNMT1	5	NR2C2	0	affinity chromatography technology	Cui S (2011)	1
MBD3	4	RBBP4	3	pull down, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (1999), Cui S (2011), Havugimana PC (2012), Hauri S (2016)	4
GATAD2B	15	CHD5	12	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Quan J (2014), Huttlin EL (2017)	3
NTRK1	1	HDAC2	1	affinity chromatography technology	Emdal KB (2015)	1
NR2C1	0	KDM1A	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
DNMT1	5	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Marin TL (2017), Marin TL (2017)	2
TRIM25	5	RBBP4	3	affinity chromatography technology	Choudhury NR (2017)	1
MTA3	3	MBD2	1	affinity chromatography technology, biochemical	Bantscheff M (2011), Wan C (2015)	2
PARK7	0	RBBP7	1	affinity chromatography technology	Opsahl JA (2010)	1
BCL11A	14	CHD4	22	affinity chromatography technology	Cismasiu VB (2005)	1
MBD2	1	MBD3L2	0	two hybrid, pull down	Jin SG (2005), Jin SG (2005)	2
BCL11B	3	MBD3	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	4
HDAC2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Fleischer TC (2003), Fleischer TC (2003), Hakimi MA (2003), Yang L (2003), Laherty CD (1997), Zhang Y (2002), Tong JK (1998), Zhang Y (2005), Nakamura T (2002), Sekhavat A (2007), Zou J (2004), Sun JM (2007), Xue Y (1998), Tsai SC (2002), Brandl A (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hsu DS (2014)	20
BCL11B	3	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	3
MTA1	3	UBE3C	5	affinity chromatography technology	Zang HL (2017)	1
UBE2I	0	CHD4	22	enzymatic study	Gocke CB (2005)	1
ELAVL1	0	UBE3C	5	affinity chromatography technology	Abdelmohsen K (2009)	1
EED	1	ELAVL1	0	affinity chromatography technology	Cao Q (2014)	1
ESR1	0	SYNCRIP	6	affinity chromatography technology, pull down, affinity chromatography technology	Tarallo R (2011), Nalvarte I (2010), Han SJ (2016)	3
NACC2	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Xuan C (2013), Xuan C (2013)	2
SIRT1	3	UBE2I	0	enzymatic study	Hsieh YL (2013)	1
ZNF219	3	CHD4	22	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MBD3L1	0	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SUMO2	0	CHD4	22	pull down	Ouyang J (2009)	1
CHD5	12	MTA1	3	affinity chromatography technology, biochemical	Quan J (2014), Wan C (2015)	2