PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000262375	[[4475805, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4504811, 4504928], [4505546, 4506776]]	[[4475882, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4504811, 4504915]]
ENST00000355296	[[4475860, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4506776]]	[[4475882, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4505569]]
ENST00000570857	[[4475865, 4476093], [4487402, 4487486], [4491375, 4491576], [4492268, 4492309]]	[[4475882, 4476093], [4487402, 4487425]]
ENST00000575106	[[4475865, 4476093], [4481599, 4481673], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492384]]	[[4475882, 4476093], [4481599, 4481673], [4484384, 4484468]]
ENST00000431375	[[4475865, 4476093], [4491506, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4505952]]	[[4475992, 4476093], [4491506, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4505569]]
ENST00000576911	[[4475865, 4476093], [4491506, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4505952]]	[[4475882, 4476093], [4491506, 4491576], [4492268, 4492284]]
ENST00000572974	[[4475868, 4476093], [4481599, 4481869]]	None
ENST00000574895	[[4475879, 4476093], [4484384, 4484518], [4487402, 4487486], [4492268, 4492394]]	[[4475882, 4476093], [4484384, 4484518], [4487402, 4487486], [4492268, 4492394]]
ENST00000573120	[[4476048, 4476093], [4484384, 4484518], [4487402, 4487626]]	None
ENST00000572139	[[4483846, 4484103], [4484384, 4484518], [4487402, 4487486], [4491375, 4491478]]	None
ENST00000572009	[[4484298, 4484518], [4487402, 4487486], [4491375, 4491402]]	None
ENST00000577083	[[4490257, 4491576], [4492268, 4493165], [4494664, 4494729], [4496886, 4497956]]	None
ENST00000576180	[[4499554, 4500498], [4504811, 4504928], [4505546, 4506773]]	None
ENST00000574393	[[4505492, 4505781], [4506488, 4506776]]	None
NM_001286516	[[4475805, 4476093], [4491506, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4506776]]	[[4475992, 4476093], [4491506, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4505569]]
NM_001135110	[[4475805, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4506776]]	[[4475882, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4505546, 4505569]]
NM_005147	[[4475805, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4504811, 4504928], [4505546, 4506776]]	[[4475882, 4476093], [4484384, 4484518], [4487402, 4487486], [4491375, 4491576], [4492268, 4492421], [4493017, 4493165], [4494664, 4494729], [4496886, 4497015], [4498733, 4498849], [4500400, 4500498], [4504811, 4504915]]

Promoter

Chrom	Start	End	Description
chr16	4475853	4475887	CAGE_peak_1_at_DNAJA3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I004424	4424442	4427745	2.09	[{'connected_gene': 'CORO7', 'score': 550.77}, {'connected_gene': 'DNAJA3', 'score': 550.77}, {'connected_gene': 'ENSG00000277170', 'score': 550.77}, {'connected_gene': 'NMRAL1', 'score': 28.9}, {'connected_gene': 'CREBBP', 'score': 23.76}, {'connected_gene': 'ZNF500', 'score': 22.05}, {'connected_gene': 'ZNF597', 'score': 18.91}, {'connected_gene': 'ANKS3', 'score': 15.33}, {'connected_gene': 'UBN1', 'score': 14.68}, {'connected_gene': 'HMOX2', 'score': 12.75}, {'connected_gene': 'CLUAP1', 'score': 12.57}, {'connected_gene': 'LOC102724927', 'score': 10.62}, {'connected_gene': 'MGRN1', 'score': 6.49}]
chr16	GH16I004454	4454169	4455150	0.52	[{'connected_gene': 'GC16P004458', 'score': 0.77}, {'connected_gene': 'ENSG00000275515', 'score': 0.34}, {'connected_gene': 'DNAJA3', 'score': 0.31}]
chr16	GH16I004435	4435092	4435391	0.31	[{'connected_gene': 'ENSG00000275515', 'score': 550.77}, {'connected_gene': 'DNAJA3', 'score': 0.44}, {'connected_gene': 'GC16P004458', 'score': 0.34}]
chr16	GH16I004436	4435820	4435969	0.46	[{'connected_gene': 'ENSG00000275515', 'score': 0.77}, {'connected_gene': 'DNAJA3', 'score': 0.39}, {'connected_gene': 'GC16P004458', 'score': 0.34}]
chr16	GH16I004433	4433251	4434793	0.87	[{'connected_gene': 'ENSG00000275515', 'score': 550.77}, {'connected_gene': 'NMRAL1', 'score': 40.23}, {'connected_gene': 'DNAJA3', 'score': 0.44}, {'connected_gene': 'GC16P004458', 'score': 0.34}]