PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000322396	[[148558935, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277], [148594788, 148595025], [148601473, 148601622], [148604949, 148605381]]	[[148559682, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277], [148594788, 148595025], [148601473, 148601622], [148604949, 148605138]]
ENST00000510269	[[148559535, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582469]]	None
ENST00000541232	[[148559535, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277], [148594788, 148595025], [148604949, 148605276]]	[[148559682, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277]]
ENST00000514886	[[148559535, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277], [148594788, 148595025], [148604949, 148605276]]	[[148595013, 148595025], [148604949, 148605138]]
ENST00000511687	[[148559831, 148559898], [148560110, 148560444]]	None
NM_138364	[[148558935, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277], [148594788, 148595025], [148601473, 148601622], [148604949, 148605381]]	[[148559682, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277], [148594788, 148595025], [148601473, 148601622], [148604949, 148605138]]
NM_001304458	[[148558935, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277], [148594788, 148595025], [148604949, 148605381]]	[[148559682, 148559898], [148560110, 148560233], [148563937, 148564091], [148575002, 148575717], [148578942, 148579126], [148581996, 148582189], [148589689, 148589796], [148591791, 148591894], [148594109, 148594277]]

Promoter

Chrom	Start	End	Description
chr4	148605150	148605161	CAGE_peak_5_at_PRMT10_5end
chr4	148605163	148605168	CAGE_peak_9_at_PRMT10_5end
chr4	148605177	148605178	CAGE_peak_10_at_PRMT10_5end
chr4	148605203	148605214	CAGE_peak_7_at_PRMT10_5end
chr4	148605219	148605264	CAGE_peak_2_at_PRMT10_5end
chr4	148605265	148605322	CAGE_peak_1_at_PRMT10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I147849	147846470	147846619	0.69	[{'connected_gene': 'PRMT9', 'score': 10.68}, {'connected_gene': 'GC04P147826', 'score': 0.37}, {'connected_gene': 'RFPL4AP4', 'score': 0.19}, {'connected_gene': 'ARHGAP10', 'score': 0.14}]
chr4	GH04I147845	147845731	147846242	0.31	[{'connected_gene': 'PRMT9', 'score': 10.68}, {'connected_gene': 'GC04P147826', 'score': 0.37}, {'connected_gene': 'RFPL4AP4', 'score': 0.19}, {'connected_gene': 'ARHGAP10', 'score': 0.14}]
chr4	GH04I147682	147682759	147685150	2.05	[{'connected_gene': 'PRMT9', 'score': 550.77}, {'connected_gene': 'GC04P147675', 'score': 0.39}]
chr4	GH04I147730	147730994	147734688	2.37	[{'connected_gene': 'ARHGAP10', 'score': 550.77}, {'connected_gene': 'PRMT9', 'score': 1.62}, {'connected_gene': 'RNA5SP165', 'score': 0.39}]
chr4	GH04I147827	147827002	147833642	1.42	[{'connected_gene': 'ARHGAP10', 'score': 19.59}, {'connected_gene': 'PRMT9', 'score': 2.9}, {'connected_gene': 'GC04P147826', 'score': 0.77}, {'connected_gene': 'RFPL4AP4', 'score': 0.17}]
chr4	GH04I147689	147689052	147689650	0.2	[{'connected_gene': 'ARHGAP10', 'score': 12.03}, {'connected_gene': 'PRMT9', 'score': 0.44}, {'connected_gene': 'GC04P147717', 'score': 0.31}]
chr4	GH04I148059	148059805	148062000	1.23	[{'connected_gene': 'ARHGAP10', 'score': 12.37}, {'connected_gene': 'NR3C2', 'score': 2.24}, {'connected_gene': 'PRMT9', 'score': 1.57}, {'connected_gene': 'GC04P148078', 'score': 0.37}, {'connected_gene': 'GC04M148018', 'score': 0.31}]
chr4	GH04I147616	147616730	147618620	2	[{'connected_gene': 'TMEM184C', 'score': 562.31}, {'connected_gene': 'ENSG00000251298', 'score': 550.77}, {'connected_gene': 'PRMT9', 'score': 26.49}, {'connected_gene': 'GC04P147631', 'score': 0.39}]
chr4	GH04I148441	148441400	148446286	2.49	[{'connected_gene': 'NR3C2', 'score': 555.79}, {'connected_gene': 'PRMT9', 'score': 38.7}, {'connected_gene': 'ARHGAP10', 'score': 4.53}, {'connected_gene': 'GC04P148297', 'score': 0.11}, {'connected_gene': 'GC04P148296', 'score': 0.11}]
chr4	GH04I147799	147799378	147800812	1.21	[{'connected_gene': 'GC04P147800', 'score': 550.77}, {'connected_gene': 'PRMT9', 'score': 21.25}, {'connected_gene': 'ARHGAP10', 'score': 12.31}, {'connected_gene': 'MIR4799', 'score': 0.37}]
chr4	GH04I147708	147708270	147708399	0.63	[{'connected_gene': 'GC04P147717', 'score': 0.44}, {'connected_gene': 'PRMT9', 'score': 0.34}]
chr4	GH04I147714	147714115	147715239	0.69	[{'connected_gene': 'GC04P147717', 'score': 0.77}, {'connected_gene': 'PRMT9', 'score': 0.29}]
chr4	GH04I147709	147708400	147708601	0.63	[{'connected_gene': 'GC04P147717', 'score': 0.44}, {'connected_gene': 'PRMT9', 'score': 0.34}]
chr4	GH04I147825	147825380	147826829	1.4	[{'connected_gene': 'GC04P147826', 'score': 550.77}, {'connected_gene': 'ARHGAP10', 'score': 4.93}, {'connected_gene': 'PRMT9', 'score': 3.02}, {'connected_gene': 'RN7SL254P', 'score': 0.37}]
chr4	GH04I147646	147646410	147646559	0.31	[{'connected_gene': 'GC04P147646', 'score': 550.77}, {'connected_gene': 'GC04P147648', 'score': 0.77}, {'connected_gene': 'TMEM184C', 'score': 0.31}, {'connected_gene': 'PRMT9', 'score': 0.28}]