PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000308683	[[16451627, 16451893], [16453121, 16453265], [16458625, 16458738], [16463216, 16463379], [16463590, 16463851], [16465149, 16465901]]	[[16451765, 16451893], [16453121, 16453265], [16458625, 16458738], [16463216, 16463379], [16463590, 16463851], [16465149, 16465774]]
NM_033414	[[16451627, 16451893], [16453121, 16453265], [16458625, 16458738], [16463216, 16463379], [16463590, 16463851], [16465149, 16465894]]	[[16451765, 16451893], [16453121, 16453265], [16458625, 16458738], [16463216, 16463379], [16463590, 16463851], [16465149, 16465774]]

Promoter

Chrom	Start	End	Description
chr5	16465869	16465891	CAGE_peak_2_at_ZNF622_5end
chr5	16465902	16465917	CAGE_peak_1_at_ZNF622_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I016491	16491663	16494254	1.27	[{'connected_gene': 'ZNF622', 'score': 17.46}, {'connected_gene': 'RETREG1', 'score': 8.81}, {'connected_gene': 'LOC101929524', 'score': 0.13}]
chr5	GH05I016499	16499017	16501540	0.2	[{'connected_gene': 'ZNF622', 'score': 17.85}, {'connected_gene': 'RETREG1', 'score': 5.77}, {'connected_gene': 'LOC101929524', 'score': 0.13}]
chr5	GH05I016502	16502876	16503458	0.4	[{'connected_gene': 'ZNF622', 'score': 19.42}, {'connected_gene': 'RETREG1', 'score': 6.08}, {'connected_gene': 'LOC101929524', 'score': 0.14}]
chr5	GH05I016543	16543400	16543600	0.58	[{'connected_gene': 'ZNF622', 'score': 10.81}, {'connected_gene': 'ENSG00000250415', 'score': 10.07}, {'connected_gene': 'RETREG1', 'score': 10.07}, {'connected_gene': 'LOC101929524', 'score': 0.19}]
chr5	GH05I016468	16468880	16469937	0.31	[{'connected_gene': 'ZNF622', 'score': 550.77}, {'connected_gene': 'ENSG00000250415', 'score': 9.89}, {'connected_gene': 'RETREG1', 'score': 9.89}, {'connected_gene': 'LINC02150', 'score': 9.36}, {'connected_gene': 'GC05P016465', 'score': 0.77}]
chr5	GH05I016604	16604028	16605765	0.2	[{'connected_gene': 'ZNF622', 'score': 10.01}, {'connected_gene': 'LOC101929524', 'score': 0.39}, {'connected_gene': 'RETREG1', 'score': 0.39}]
chr5	GH05I016609	16609066	16610504	0.31	[{'connected_gene': 'ZNF622', 'score': 10.01}, {'connected_gene': 'LOC101929524', 'score': 0.44}, {'connected_gene': 'RETREG1', 'score': 0.44}]
chr5	GH05I016474	16474694	16475511	0.31	[{'connected_gene': 'ZNF622', 'score': 0.77}, {'connected_gene': 'LOC101929524', 'score': 0.11}, {'connected_gene': 'RETREG1', 'score': 0.11}]
chr5	GH05I016496	16496170	16498331	0.2	[{'connected_gene': 'ZNF622', 'score': 10.81}, {'connected_gene': 'LOC101929524', 'score': 0.13}, {'connected_gene': 'RETREG1', 'score': 0.13}]
chr5	GH05I016482	16482506	16484885	0.51	[{'connected_gene': 'ZNF622', 'score': 0.39}, {'connected_gene': 'LOC101929524', 'score': 0.12}, {'connected_gene': 'RETREG1', 'score': 0.12}]
chr5	GH05I016531	16531132	16531281	0.51	[{'connected_gene': 'ZNF622', 'score': 10.4}, {'connected_gene': 'LOC101929524', 'score': 0.18}, {'connected_gene': 'RETREG1', 'score': 0.17}]
chr5	GH05I016536	16536432	16536581	0.69	[{'connected_gene': 'ZNF622', 'score': 10.78}, {'connected_gene': 'LOC101929524', 'score': 0.18}, {'connected_gene': 'RETREG1', 'score': 0.18}]
chr5	GH05I016489	16489201	16490149	1.03	[{'connected_gene': 'ZNF622', 'score': 0.37}, {'connected_gene': 'LOC101929524', 'score': 0.13}, {'connected_gene': 'RETREG1', 'score': 0.13}]
chr5	GH05I016470	16470741	16471816	0.2	[{'connected_gene': 'ZNF622', 'score': 550.77}, {'connected_gene': 'LINC02150', 'score': 13.41}, {'connected_gene': 'ENSG00000250415', 'score': 9.89}, {'connected_gene': 'RETREG1', 'score': 9.89}, {'connected_gene': 'LOC101929524', 'score': 0.11}]
chr5	GH05I016544	16544351	16546568	0.31	[{'connected_gene': 'RETREG1', 'score': 25.13}, {'connected_gene': 'ZNF622', 'score': 10.8}, {'connected_gene': 'ENSG00000250415', 'score': 10.31}, {'connected_gene': 'LOC101929524', 'score': 0.19}]
chr5	GH05I016591	16591038	16592555	0.38	[{'connected_gene': 'RETREG1', 'score': 17.1}, {'connected_gene': 'ENSG00000250415', 'score': 12.3}, {'connected_gene': 'ZNF622', 'score': 10.29}, {'connected_gene': 'ENSG00000250981', 'score': 4.77}, {'connected_gene': 'LOC101929524', 'score': 0.34}]
chr5	GH05I016561	16561493	16563266	0.38	[{'connected_gene': 'RETREG1', 'score': 21.95}, {'connected_gene': 'ENSG00000250415', 'score': 10.79}, {'connected_gene': 'ZNF622', 'score': 10.69}, {'connected_gene': 'LOC101929524', 'score': 0.23}]
chr5	GH05I016587	16587795	16590664	0.74	[{'connected_gene': 'RETREG1', 'score': 16.84}, {'connected_gene': 'ENSG00000250415', 'score': 11.16}, {'connected_gene': 'ZNF622', 'score': 10.15}, {'connected_gene': 'LOC101929524', 'score': 0.31}]
chr5	GH05I016541	16541782	16543154	0.54	[{'connected_gene': 'RETREG1', 'score': 16.25}, {'connected_gene': 'ZNF622', 'score': 10.81}, {'connected_gene': 'ENSG00000250415', 'score': 10.07}, {'connected_gene': 'LOC101929524', 'score': 0.19}]
chr5	GH05I016529	16529296	16530139	0.63	[{'connected_gene': 'RETREG1', 'score': 10.75}, {'connected_gene': 'ZNF622', 'score': 10.41}, {'connected_gene': 'LOC101929524', 'score': 0.17}]
chr5	GH05I016519	16519217	16523250	0.95	[{'connected_gene': 'RETREG1', 'score': 15.37}, {'connected_gene': 'ZNF622', 'score': 0.23}, {'connected_gene': 'LOC101929524', 'score': 0.16}]
chr5	GH05I016533	16533367	16535718	0.2	[{'connected_gene': 'RETREG1', 'score': 11.77}, {'connected_gene': 'ZNF622', 'score': 10.79}, {'connected_gene': 'LOC101929524', 'score': 0.18}]
chr5	GH05I016495	16495116	16495840	0.49	[{'connected_gene': 'RETREG1', 'score': 6.61}, {'connected_gene': 'ZNF622', 'score': 0.31}, {'connected_gene': 'LOC101929524', 'score': 0.13}]
chr5	GH05I016563	16563724	16573398	0.67	[{'connected_gene': 'RETREG1', 'score': 23.19}, {'connected_gene': 'ENSG00000250415', 'score': 10.84}, {'connected_gene': 'ZNF622', 'score': 10.68}, {'connected_gene': 'LOC101929524', 'score': 0.25}]
chr5	GH05I016505	16505996	16510558	1.72	[{'connected_gene': 'RETREG1', 'score': 566.32}, {'connected_gene': 'ZNF622', 'score': 11.26}, {'connected_gene': 'LOC101929524', 'score': 0.14}]
chr5	GH05I016584	16584422	16587360	0.46	[{'connected_gene': 'RETREG1', 'score': 15.9}, {'connected_gene': 'ENSG00000250415', 'score': 11.21}, {'connected_gene': 'ZNF622', 'score': 10.15}, {'connected_gene': 'LOC101929524', 'score': 0.29}]
chr5	GH05I016528	16528133	16529176	0.57	[{'connected_gene': 'RETREG1', 'score': 9.75}, {'connected_gene': 'ZNF622', 'score': 0.22}, {'connected_gene': 'LOC101929524', 'score': 0.17}]
chr5	GH05I016537	16537361	16541408	1.42	[{'connected_gene': 'RETREG1', 'score': 24.66}, {'connected_gene': 'ZNF622', 'score': 10.82}, {'connected_gene': 'ENSG00000250415', 'score': 10.54}, {'connected_gene': 'LOC101929524', 'score': 0.18}]
chr5	GH05I016626	16626685	16628008	1.31	[{'connected_gene': 'RETREG1', 'score': 8.37}, {'connected_gene': 'LOC101929524', 'score': 5.36}, {'connected_gene': 'ZNF622', 'score': 1.4}, {'connected_gene': 'ENSG00000201370', 'score': 0.77}, {'connected_gene': 'GC05M016623', 'score': 0.77}, {'connected_gene': 'GC05P016661', 'score': 0.29}]
chr5	GH05I016547	16547001	16547200	0.69	[{'connected_gene': 'RETREG1', 'score': 15.02}, {'connected_gene': 'LOC101929524', 'score': 0.2}, {'connected_gene': 'ZNF622', 'score': 0.18}]
chr5	GH05I016553	16553531	16561483	0.57	[{'connected_gene': 'RETREG1', 'score': 12.87}, {'connected_gene': 'LOC101929524', 'score': 0.22}, {'connected_gene': 'ZNF622', 'score': 0.17}]
chr5	GH05I016577	16577907	16581785	0.63	[{'connected_gene': 'RETREG1', 'score': 4.82}, {'connected_gene': 'LOC101929524', 'score': 0.28}, {'connected_gene': 'ZNF622', 'score': 0.14}]
chr5	GH05I016551	16551031	16553487	0.67	[{'connected_gene': 'RETREG1', 'score': 12.33}, {'connected_gene': 'LOC101929524', 'score': 0.21}, {'connected_gene': 'ZNF622', 'score': 0.18}]
chr5	GH05I016574	16574145	16576059	0.97	[{'connected_gene': 'RETREG1', 'score': 12.65}, {'connected_gene': 'LOC101929524', 'score': 0.26}, {'connected_gene': 'ZNF622', 'score': 0.15}]
chr5	GH05I016548	16547951	16549047	0.51	[{'connected_gene': 'RETREG1', 'score': 15.0}, {'connected_gene': 'LOC101929524', 'score': 0.2}, {'connected_gene': 'ZNF622', 'score': 0.18}]
chr5	GH05I016599	16599254	16601570	0.56	[{'connected_gene': 'LOC101929524', 'score': 0.37}, {'connected_gene': 'RETREG1', 'score': 0.37}, {'connected_gene': 'ZNF622', 'score': 0.12}]
chr5	GH05I016578	16577652	16577840	0.84	[{'connected_gene': 'LOC101929524', 'score': 0.28}, {'connected_gene': 'RETREG1', 'score': 0.28}, {'connected_gene': 'ZNF622', 'score': 0.14}]
chr5	GH05I016549	16549612	16549761	0.4	[{'connected_gene': 'LOC101929524', 'score': 0.2}, {'connected_gene': 'RETREG1', 'score': 0.2}, {'connected_gene': 'ZNF622', 'score': 0.18}]
chr5	GH05I016550	16550432	16550581	0.95	[{'connected_gene': 'LOC101929524', 'score': 0.2}, {'connected_gene': 'RETREG1', 'score': 0.2}, {'connected_gene': 'ZNF622', 'score': 0.18}]
chr5	GH05I016481	16481169	16482261	0.31	[{'connected_gene': 'LINC02150', 'score': 14.11}, {'connected_gene': 'ZNF622', 'score': 0.39}, {'connected_gene': 'RETREG1', 'score': 0.12}, {'connected_gene': 'LOC101929524', 'score': 0.12}]
chr5	GH05I016486	16486164	16488935	0.79	[{'connected_gene': 'LINC02150', 'score': 14.77}, {'connected_gene': 'ZNF622', 'score': 0.37}, {'connected_gene': 'LOC101929524', 'score': 0.13}, {'connected_gene': 'RETREG1', 'score': 0.13}]
chr5	GH05I016455	16455114	16457119	1.12	[{'connected_gene': 'LINC02150', 'score': 17.08}, {'connected_gene': 'GC05P016453', 'score': 0.77}, {'connected_gene': 'GC05P016465', 'score': 0.44}, {'connected_gene': 'ZNF622', 'score': 0.39}]
chr5	GH05I016460	16460582	16468355	2.27	[{'connected_gene': 'GC05P016465', 'score': 550.77}, {'connected_gene': 'ZNF622', 'score': 550.44}, {'connected_gene': 'LINC02150', 'score': 14.85}, {'connected_gene': 'FBXL7', 'score': 9.68}, {'connected_gene': 'GC05P016453', 'score': 0.39}]
chr5	GH05I016457	16457444	16458947	0.43	[{'connected_gene': 'GC05P016465', 'score': 0.44}, {'connected_gene': 'GC05P016453', 'score': 0.44}, {'connected_gene': 'ZNF622', 'score': 0.39}]
chr5	GH05I016596	16596752	16596901	0.4	[{'connected_gene': 'ENSG00000250415', 'score': 12.33}, {'connected_gene': 'RETREG1', 'score': 12.33}, {'connected_gene': 'ZNF622', 'score': 10.29}, {'connected_gene': 'LOC101929524', 'score': 0.37}]
chr5	GH05I016593	16593000	16594000	1.11	[{'connected_gene': 'ENSG00000250415', 'score': 12.33}, {'connected_gene': 'RETREG1', 'score': 12.33}, {'connected_gene': 'ZNF622', 'score': 10.29}, {'connected_gene': 'LOC101929524', 'score': 0.34}]