PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000560386	[[35509545, 35512783], [35665721, 35665809], [35674022, 35674117], [35703035, 35703052]]	None
ENST00000558973	[[35623001, 35623278], [35665721, 35665809], [35674022, 35674117], [35703035, 35703059]]	None
ENST00000256538	[[35663082, 35664404], [35665721, 35665809], [35674022, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35747021], [35830474, 35830668], [35834613, 35834708], [35838319, 35838369]]	[[35664350, 35664404], [35665721, 35665809], [35674022, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35747021], [35830474, 35830668], [35834613, 35834708], [35838319, 35838342]]
ENST00000561411	[[35674032, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35747021], [35830474, 35830668], [35838319, 35838366]]	[[35674032, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35747021], [35830474, 35830642]]
ENST00000559784	[[35674035, 35674117], [35703035, 35703097], [35746947, 35747021], [35830474, 35830668], [35834613, 35834692]]	None
ENST00000559585	[[35782169, 35782398], [35830474, 35830668], [35834613, 35834708], [35838319, 35838354]]	None
ENST00000558266	[[35664307, 35664394], [35665721, 35665809], [35674022, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35746961]]	[[35664307, 35664394], [35665721, 35665809], [35674022, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35746961]]
ENST00000440392	[[35812473, 35814479], [35830474, 35830668], [35834613, 35834708], [35838319, 35838393]]	[[35814293, 35814479], [35830474, 35830668], [35834613, 35834708], [35838319, 35838342]]
ENST00000560526	[[35830282, 35830668], [35834613, 35834708], [35838319, 35838394]]	None
NM_080650	[[35663169, 35664404], [35665721, 35665809], [35674022, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35747021], [35830474, 35830668], [35834613, 35834708], [35838319, 35838404]]	[[35664350, 35664404], [35665721, 35665809], [35674022, 35674117], [35703035, 35703097], [35742885, 35743004], [35746947, 35747021], [35830474, 35830668], [35834613, 35834708], [35838319, 35838342]]
NM_001141972	[[35812473, 35814479], [35830474, 35830668], [35834613, 35834708], [35838319, 35838404]]	[[35814293, 35814479], [35830474, 35830668], [35834613, 35834708], [35838319, 35838342]]

Promoter

Chrom	Start	End	Description
chr15	35838348	35838399	CAGE_peak_1_at_ATPBD4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I035690	35690052	35694280	0.96	[{'connected_gene': 'AQR', 'score': 11.24}, {'connected_gene': 'DPH6-AS1', 'score': 10.76}, {'connected_gene': 'DPH6', 'score': 10.76}, {'connected_gene': 'RPL36AP8', 'score': 10.23}, {'connected_gene': 'GC15P035699', 'score': 0.44}, {'connected_gene': 'PIR55827', 'score': 0.29}]
chr15	GH15I035140	35140792	35143713	0.89	[{'connected_gene': 'DPH6', 'score': 5.29}, {'connected_gene': 'LOC441722', 'score': 4.57}, {'connected_gene': 'PIR59365', 'score': 0.37}, {'connected_gene': 'ENSG00000259336', 'score': 0.31}]
chr15	GH15I035534	35534874	35536541	0.2	[{'connected_gene': 'DPH6', 'score': 6.13}, {'connected_gene': 'DPH6-AS1', 'score': 0.39}, {'connected_gene': 'HNRNPA1P45', 'score': 0.12}]
chr15	GH15I035491	35491892	35493160	0.2	[{'connected_gene': 'DPH6', 'score': 4.77}, {'connected_gene': 'DPH6-AS1', 'score': 0.23}, {'connected_gene': 'HNRNPA1P45', 'score': 0.16}]
chr15	GH15I035427	35427016	35427656	0.2	[{'connected_gene': 'DPH6', 'score': 6.77}, {'connected_gene': 'HNRNPA1P45', 'score': 0.31}, {'connected_gene': 'DPH6-AS1', 'score': 0.13}]
chr15	GH15I035544	35544625	35550640	2.25	[{'connected_gene': 'DPH6-AS1', 'score': 550.77}, {'connected_gene': 'DPH6', 'score': 550.77}, {'connected_gene': 'AQR', 'score': 29.32}, {'connected_gene': 'GC15P035618', 'score': 0.19}]
chr15	GH15I035477	35477908	35478156	0.66	[{'connected_gene': 'DPH6-AS1', 'score': 0.2}, {'connected_gene': 'DPH6', 'score': 0.2}, {'connected_gene': 'HNRNPA1P45', 'score': 0.18}]
chr15	GH15I035496	35496553	35496805	0.61	[{'connected_gene': 'DPH6-AS1', 'score': 0.25}, {'connected_gene': 'DPH6', 'score': 0.25}, {'connected_gene': 'HNRNPA1P45', 'score': 0.15}]
chr15	GH15I035541	35541080	35541229	0.38	[{'connected_gene': 'DPH6-AS1', 'score': 0.44}, {'connected_gene': 'DPH6', 'score': 0.44}, {'connected_gene': 'HNRNPA1P45', 'score': 0.11}]
chr15	GH15I035522	35522060	35522209	0.49	[{'connected_gene': 'DPH6-AS1', 'score': 11.02}, {'connected_gene': 'DPH6', 'score': 11.02}, {'connected_gene': 'HNRNPA1P45', 'score': 0.13}]
chr15	GH15I035481	35481833	35482495	0.66	[{'connected_gene': 'DPH6-AS1', 'score': 0.21}, {'connected_gene': 'DPH6', 'score': 0.21}, {'connected_gene': 'HNRNPA1P45', 'score': 0.18}]
chr15	GH15I035556	35556728	35558308	1.14	[{'connected_gene': 'DPH6-AS1', 'score': 0.39}, {'connected_gene': 'DPH6', 'score': 0.39}, {'connected_gene': 'GC15P035618', 'score': 0.21}]
chr15	GH15I035565	35565763	35566121	0.4	[{'connected_gene': 'DPH6-AS1', 'score': 0.37}, {'connected_gene': 'DPH6', 'score': 0.37}, {'connected_gene': 'GC15P035618', 'score': 0.23}]
chr15	GH15I035559	35559453	35563353	0.64	[{'connected_gene': 'DPH6-AS1', 'score': 0.37}, {'connected_gene': 'DPH6', 'score': 0.37}, {'connected_gene': 'GC15P035618', 'score': 0.22}]
chr15	GH15I035381	35381442	35381663	0.58	[{'connected_gene': 'MIR3942', 'score': 0.44}, {'connected_gene': 'ENSG00000259688', 'score': 0.39}, {'connected_gene': 'DPH6', 'score': 0.1}]
chr15	GH15I035361	35361944	35363041	0.31	[{'connected_gene': 'MIR3942', 'score': 0.44}, {'connected_gene': 'RBM17P4', 'score': 0.21}, {'connected_gene': 'DPH6', 'score': 0.09}]
chr15	GH15I035246	35246198	35246875	0.2	[{'connected_gene': 'NUTF2P6', 'score': 0.28}, {'connected_gene': 'ANP32AP1', 'score': 0.21}, {'connected_gene': 'DPH6', 'score': 0.06}]
chr15	GH15I035253	35253121	35254645	0.71	[{'connected_gene': 'NUTF2P6', 'score': 0.31}, {'connected_gene': 'ANP32AP1', 'score': 0.19}, {'connected_gene': 'DPH6', 'score': 0.06}]
chr15	GH15I035245	35245780	35245929	0.2	[{'connected_gene': 'NUTF2P6', 'score': 0.28}, {'connected_gene': 'ANP32AP1', 'score': 0.21}, {'connected_gene': 'DPH6', 'score': 0.06}]
chr15	GH15I035436	35436723	35437875	0.31	[{'connected_gene': 'HNRNPA1P45', 'score': 0.28}, {'connected_gene': 'DPH6-AS1', 'score': 0.14}, {'connected_gene': 'DPH6', 'score': 0.14}]
chr15	GH15I035437	35436540	35436689	0.2	[{'connected_gene': 'HNRNPA1P45', 'score': 0.28}, {'connected_gene': 'DPH6-AS1', 'score': 0.14}, {'connected_gene': 'DPH6', 'score': 0.14}]
chr15	GH15I035438	35438900	35439919	0.31	[{'connected_gene': 'HNRNPA1P45', 'score': 0.28}, {'connected_gene': 'DPH6-AS1', 'score': 0.14}, {'connected_gene': 'DPH6', 'score': 0.14}]
chr15	GH15I035302	35302258	35302730	0.51	[{'connected_gene': 'RBM17P4', 'score': 0.77}, {'connected_gene': 'MIR3942', 'score': 0.2}, {'connected_gene': 'DPH6', 'score': 0.07}]
chr15	GH15I035311	35311720	35311869	0.31	[{'connected_gene': 'RBM17P4', 'score': 0.39}, {'connected_gene': 'MIR3942', 'score': 0.21}, {'connected_gene': 'DPH6', 'score': 0.07}]
chr15	GH15I035304	35304817	35310390	1.34	[{'connected_gene': 'RBM17P4', 'score': 4.98}, {'connected_gene': 'MIR3942', 'score': 0.21}, {'connected_gene': 'DPH6', 'score': 0.07}]
chr15	GH15I035696	35696118	35699945	1.26	[{'connected_gene': 'GC15P035699', 'score': 550.77}, {'connected_gene': 'DPH6-AS1', 'score': 10.75}, {'connected_gene': 'DPH6', 'score': 10.75}, {'connected_gene': 'PIR55827', 'score': 0.28}]
chr15	GH15I035293	35293400	35293801	1	[{'connected_gene': 'GC15M035300', 'score': 0.44}, {'connected_gene': 'PIR40873', 'score': 0.44}, {'connected_gene': 'NUTF2P6', 'score': 0.39}, {'connected_gene': 'DPH6', 'score': 0.07}]
chr15	GH15I035290	35290362	35290683	0.58	[{'connected_gene': 'GC15M035300', 'score': 0.44}, {'connected_gene': 'NUTF2P6', 'score': 0.44}, {'connected_gene': 'PIR40873', 'score': 0.44}, {'connected_gene': 'DPH6', 'score': 0.07}]