PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000557982	[[90220994, 90221163], [90224500, 90224771], [90233807, 90234013]]	None
ENST00000561224	[[90224535, 90224771], [90229661, 90229777], [90233807, 90233984]]	[[90224748, 90224771], [90229661, 90229777], [90233807, 90233863]]
ENST00000300056	[[90224761, 90227179], [90229661, 90229777], [90233807, 90234013]]	[[90226607, 90227179], [90229661, 90229777], [90233807, 90233863]]
ENST00000561257	[[90226310, 90227086], [90229661, 90229777], [90233807, 90233893]]	[[90226607, 90227086], [90229661, 90229777], [90233807, 90233863]]
ENST00000559170	[[90226481, 90227179], [90233807, 90234014]]	[[90227136, 90227179], [90233807, 90233863]]
NM_003847	[[90224761, 90227179], [90229661, 90229777], [90233807, 90234015]]	[[90226607, 90227179], [90229661, 90229777], [90233807, 90233863]]
NM_001271572	[[90224761, 90227086], [90229661, 90229777], [90233807, 90234015]]	[[90226607, 90227086], [90229661, 90229777], [90233807, 90233863]]
NM_001271573	[[90224761, 90227179], [90233807, 90234015]]	[[90226607, 90226916]]

Promoter

Chrom	Start	End	Description
chr15	90233866	90233883	CAGE_peak_2_at_PEX11A_5end
chr15	90233907	90233991	CAGE_peak_1_at_PEX11A_5end
chr15	90234006	90234017	CAGE_peak_3_at_PEX11A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I089548	89548126	89549218	0.2	[{'connected_gene': 'TICRR', 'score': 10.34}, {'connected_gene': 'PEX11A', 'score': 5.67}, {'connected_gene': 'LINC00928', 'score': 0.34}, {'connected_gene': 'ENSG00000259713', 'score': 0.29}]
chr15	GH15I089664	89664802	89666856	0.89	[{'connected_gene': 'PEX11A', 'score': 11.81}, {'connected_gene': 'WDR93', 'score': 11.81}, {'connected_gene': 'RPL36AP43', 'score': 11.81}, {'connected_gene': 'MESP1', 'score': 10.3}, {'connected_gene': 'TICRR', 'score': 7.98}, {'connected_gene': 'KIF7', 'score': 0.77}, {'connected_gene': 'PLIN1', 'score': 0.39}]
chr15	GH15I089698	89698676	89699045	0.22	[{'connected_gene': 'PEX11A', 'score': 8.71}, {'connected_gene': 'GC15P089694', 'score': 0.77}, {'connected_gene': 'WDR93', 'score': 0.44}, {'connected_gene': 'ENSG00000259561', 'score': 0.44}, {'connected_gene': 'GC15M089695', 'score': 0.37}]
chr15	GH15I089689	89689801	89691400	1.98	[{'connected_gene': 'WDR93', 'score': 566.63}, {'connected_gene': 'PEX11A', 'score': 558.31}, {'connected_gene': 'TICRR', 'score': 6.48}]
chr15	GH15I089728	89728174	89728730	0.2	[{'connected_gene': 'MESP1', 'score': 12.62}, {'connected_gene': 'PEX11A', 'score': 11.58}, {'connected_gene': 'WDR93', 'score': 11.58}, {'connected_gene': 'RPL36AP43', 'score': 11.57}, {'connected_gene': 'PLIN1', 'score': 10.64}, {'connected_gene': 'GC15M089695', 'score': 0.44}]
chr15	GH15I089780	89780514	89786366	1.71	[{'connected_gene': 'MESP1', 'score': 19.06}, {'connected_gene': 'ZNF710', 'score': 14.26}, {'connected_gene': 'ENSG00000259314', 'score': 13.65}, {'connected_gene': 'POLG', 'score': 9.94}, {'connected_gene': 'WDR93', 'score': 8.78}, {'connected_gene': 'MESP2', 'score': 6.45}, {'connected_gene': 'PEX11A', 'score': 6.43}, {'connected_gene': 'CIB1', 'score': 2.3}, {'connected_gene': 'ANPEP', 'score': 1.47}]
chr15	GH15I089749	89749858	89752452	2.18	[{'connected_gene': 'MESP1', 'score': 561.36}, {'connected_gene': 'MRPL15P1', 'score': 550.77}, {'connected_gene': 'POLG', 'score': 33.77}, {'connected_gene': 'LOC100631255', 'score': 27.5}, {'connected_gene': 'ENSG00000259314', 'score': 10.43}, {'connected_gene': 'WDR93', 'score': 10.3}, {'connected_gene': 'PEX11A', 'score': 6.76}, {'connected_gene': 'FANCI', 'score': 5.13}, {'connected_gene': 'GC15M089695', 'score': 0.29}]
chr15	GH15I089680	89679357	89679416	0.88	[{'connected_gene': 'PLIN1', 'score': 550.77}, {'connected_gene': 'PEX11A', 'score': 0.39}, {'connected_gene': 'KIF7', 'score': 0.37}]
chr15	GH15I089679	89679965	89681480	1.25	[{'connected_gene': 'PLIN1', 'score': 550.77}, {'connected_gene': 'GC15M089688', 'score': 0.44}, {'connected_gene': 'PEX11A', 'score': 0.39}]
chr15	GH15I089662	89662307	89664199	0.66	[{'connected_gene': 'KIF7', 'score': 550.77}, {'connected_gene': 'PEX11A', 'score': 11.79}, {'connected_gene': 'WDR93', 'score': 11.79}, {'connected_gene': 'RPL36AP43', 'score': 11.79}, {'connected_gene': 'MESP1', 'score': 10.3}, {'connected_gene': 'TICRR', 'score': 4.79}, {'connected_gene': 'ENSG00000228998', 'score': 4.61}, {'connected_gene': 'PLIN1', 'score': 0.37}]
chr15	GH15I090361	90361283	90365385	1.27	[{'connected_gene': 'GC15M090347', 'score': 550.77}, {'connected_gene': 'IQGAP1', 'score': 42.03}, {'connected_gene': 'GDPGP1', 'score': 15.16}, {'connected_gene': 'NGRN', 'score': 10.01}, {'connected_gene': 'CRTC3', 'score': 9.74}, {'connected_gene': 'ZNF774', 'score': 6.06}, {'connected_gene': 'CIB1', 'score': 4.88}, {'connected_gene': 'PEX11A', 'score': 4.62}, {'connected_gene': 'GC15P090381', 'score': 0.37}]
chr15	GH15I089693	89693730	89693859	0.77	[{'connected_gene': 'GC15P089694', 'score': 550.77}, {'connected_gene': 'PEX11A', 'score': 6.95}, {'connected_gene': 'WDR93', 'score': 0.77}]
chr15	GH15I089692	89692463	89692522	0.5	[{'connected_gene': 'GC15P089694', 'score': 550.77}, {'connected_gene': 'PEX11A', 'score': 550.77}, {'connected_gene': 'WDR93', 'score': 550.77}]