PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000603540	[[70918873, 70918980], [70924065, 70926616]]	[[70924216, 70926385]]
ENST00000267499	[[70924216, 70926622]]	[[70924216, 70926385]]
NM_003813	[[70918873, 70918980], [70924065, 70926622]]	[[70924216, 70926385]]

Promoter

Chrom	Start	End	Description
chr14	70918887	70918913	CAGE_peak_1_at_ADAM21_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I070452	70452125	70452184	0.5	[{'connected_gene': 'ADAM21', 'score': 550.77}, {'connected_gene': 'SYNJ2BP', 'score': 11.84}, {'connected_gene': 'GC14P070437', 'score': 0.39}, {'connected_gene': 'LOC105370555', 'score': 0.15}]
chr14	GH14I069715	69715602	69720599	1.53	[{'connected_gene': 'SRSF5', 'score': 69.36}, {'connected_gene': 'EXD2', 'score': 29.96}, {'connected_gene': 'ADAM21', 'score': 26.0}, {'connected_gene': 'ERH', 'score': 14.3}, {'connected_gene': 'SUSD6', 'score': 12.97}, {'connected_gene': 'ADAM20', 'score': 10.26}, {'connected_gene': 'ADAM20P1', 'score': 10.24}, {'connected_gene': 'ENSG00000258957', 'score': 9.74}, {'connected_gene': 'PIR54293', 'score': 0.44}]
chr14	GH14I070401	70401702	70402064	0.2	[{'connected_gene': 'COX16', 'score': 10.63}, {'connected_gene': 'ADAM21', 'score': 4.41}, {'connected_gene': 'GC14P070399', 'score': 0.77}, {'connected_gene': 'SYNJ2BP-COX16', 'score': 0.37}, {'connected_gene': 'SYNJ2BP', 'score': 0.37}]
chr14	GH14I070471	70471284	70471533	0.2	[{'connected_gene': 'COX16', 'score': 18.07}, {'connected_gene': 'SYNJ2BP', 'score': 11.61}, {'connected_gene': 'RNU2-51P', 'score': 10.12}, {'connected_gene': 'SLC8A3', 'score': 4.92}, {'connected_gene': 'MED6', 'score': 4.82}, {'connected_gene': 'ADAM20P1', 'score': 0.39}, {'connected_gene': 'ADAM21', 'score': 0.37}, {'connected_gene': 'LOC105370555', 'score': 0.18}]
chr14	GH14I070317	70317399	70319053	0.93	[{'connected_gene': 'COX16', 'score': 27.97}, {'connected_gene': 'RNU2-51P', 'score': 11.22}, {'connected_gene': 'SLC8A3', 'score': 5.5}, {'connected_gene': 'ADAM20P1', 'score': 5.38}, {'connected_gene': 'ADAM21', 'score': 5.05}, {'connected_gene': 'PIR53064', 'score': 0.29}, {'connected_gene': 'GC14M070313', 'score': 0.22}, {'connected_gene': 'LOC105370552', 'score': 0.21}]