PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
SPEN	22	RUNX1	0	unspecified method	Salat D (2008)	1
NCOR2	12	HDAC2	1	biochemical, affinity chromatography technology	Underhill C (2000), Wang L (2006)	2
VDR	2	THRAP3	2	affinity chromatography technology	Ito M (1999)	1
NCOR1	9	VDR	2	pull down, two hybrid, two hybrid, pull down, two hybrid, pull down, pull down	Puccetti E (2002), Tagami T (1998), Kim JY (2009), Kim JY (2009), Polly P (2000), Herdick M (2000), Herdick M (2000)	7
RUNX1T1	1	GFI1	0	affinity chromatography technology, pull down	McGhee L (2003), McGhee L (2003)	2
GFI1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Duan Z (2005), Duan Z (2005)	2
RUNX1T1	1	ZBTB16	4	two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique	Melnick AM (2000), Melnick AM (2000), Melnick AM (2000), Melnick A (2000), Chen TC (2014)	5
BCL6	6	HDAC2	1	affinity chromatography technology	Bereshchenko OR (2002)	1
ZMYM4	4	UBQLN4	2	affinity chromatography technology	Hauri S (2016)	1
HDAC1	4	RUNX1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Reed-Inderbitzin E (2006), Guo H (2011), Guo H (2011), Guo H (2011), Shia WJ (2012), Leong WY (2016)	6
TRIM33	4	TCF4	26	affinity chromatography technology, affinity chromatography technology	Bai X (2010), Li X (2015)	2
HOMER3	0	ABI3	1	two hybrid	Venkatesan K (2009)	1
NCOR1	9	SIN3A	13	pull down, affinity chromatography technology	Khan MM (2001), Farhana L (2007)	2
BRCA1	7	KPNB1	3	affinity chromatography technology	Ertych N (2016)	1
RUNX1T1	1	NECAB2	1	two hybrid, two hybrid	Rual JF (2005), Rolland T (2014)	2
RUNX1T1	1	C19orf57	1	two hybrid, two hybrid	Rual JF (2005), Rolland T (2014)	2
BRCA1	7	HDAC2	1	pull down, affinity chromatography technology, genetic interference	Yarden RI (1999), Chang S (2011), Shen JP (2017)	3
NCOR1	9	ZBTB16	4	pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Guidez F (1998), Melnick A (2002), Melnick A (2002), Puccetti E (2005), Choi WI (2014)	5
MEOX2	2	STX11	1	two hybrid	Rolland T (2014)	1
TCF4	26	TCF3	7	two hybrid, affinity chromatography technology	Ravasi T (2010), Huttlin EL (2017)	2
RUNX1	0	TCF12	14	affinity chromatography technology	Zhang J (2004)	1
TCF4	26	STX11	1	two hybrid	Rolland T (2014)	1
PRDM14	1	CBFA2T3	3	affinity chromatography technology	Huttlin EL (2017)	1
HDAC2	1	RUNX1T1	1	affinity chromatography technology	Amann JM (2001)	1
TCF3	7	HDAC2	1	affinity chromatography technology	Kim MS (2007)	1
NCOR1	9	RUNX1T1	1	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, two hybrid	Amann JM (2001), Zhang J (2001), Amann JM (2005), Zhang J (2004), Minucci S (2000), Gelmetti V (1998), Gelmetti V (1998), Wei Y (2007)	8
HDAC1	4	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Yao YL (2003), Fleischer TC (2003), Fleischer TC (2003), Yang L (2003), Grozinger CM (1999), Zhang J (2002), Zhang J (2002), You A (2001), Zhang Y (1999), Zhang Y (2002), Tong JK (1998), Hassig CA (1998), Yasui D (2002), Huang EY (2000), Huang EY (2000), Kuzmichev A (2002), Kuzmichev A (2002), Martinowich K (2003), Martinowich K (2003), Suzuki M (2003), Suzuki M (2006), Nakamura T (2002), Wei Q (2005), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Skowyra D (2001), Humphrey GW (2001), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Oh YM (2009), Wan C (2015), Hein MY (2015), Hsu DS (2014), Huttlin EL (2017)	45
HDAC2	1	CBFA2T3	3	affinity chromatography technology	Amann JM (2001)	1
CBFA2T3	3	RUNX1T1	1	affinity chromatography technology, affinity chromatography technology	Lindberg SR (2003), Hoogeveen AT (2002)	2
RUNX1T1	1	EFHC2	0	two hybrid	Rolland T (2014)	1
TAL2	1	PCBD2	0	two hybrid	Ravasi T (2010)	1
HDAC1	4	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology	Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017)	48
KPNA1	5	NCOR1	9	affinity chromatography technology	Hein MY (2015)	1
VDR	2	BRCA1	7	affinity chromatography technology	Deng C (2009)	1
RUNX1T1	1	645455	0	two hybrid	Rual JF (2005)	1
SIN3A	13	CBFA2T2	3	affinity chromatography technology	Amann JM (2005)	1
EFHC2	0	TRIM42	0	two hybrid	Rolland T (2014)	1
TCF4	26	CBFA2T2	3	affinity chromatography technology	Li X (2015)	1
TCF4	26	TCF12	14	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
TCF3	7	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology, pull down	Goardon N (2006), Goardon N (2006), Goardon N (2006)	3
UBE2E2	1	HDAC2	1	affinity chromatography technology	Kraemer OH (2008)	1
RUNX1T1	1	TAF9B	0	two hybrid	Rual JF (2005)	1
RUNX1T1	1	MEOX2	2	two hybrid	Rolland T (2014)	1
BRCA1	7	PSMC5	4	affinity chromatography technology	Ertych N (2016)	1
BRCA1	7	RUNX1	0	genetic interference	Shen JP (2017)	1
RUNX1T1	1	CREB3L1	1	two hybrid	Rolland T (2014)	1
NCOR1	9	CBFA2T2	3	affinity chromatography technology	Amann JM (2005)	1
CBFA2T3	3	PRKAR2A	0	affinity chromatography technology, pull down	Schillace RV (2002), Schillace RV (2002)	2
TAL2	1	TCF12	14	two hybrid	Ravasi T (2010)	1
RUNX1T1	1	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology	Hildebrand D (2001), Amann JM (2005), Zhang J (2004)	3
TRIM33	4	TCF12	14	affinity chromatography technology	Bai X (2010)	1
RUNX1T1	1	THRAP3	2	affinity chromatography technology	Ewing RM (2007)	1
KPNA1	5	KPNB1	3	pull down, pull down, pull down, biochemical, affinity chromatography technology, pull down	Koehler M (1999), Percipalle P (1997), Plafker SM (2000), Havugimana PC (2012), Hein MY (2015), Tsujii A (2015)	6
MEOX2	2	TRIM42	0	two hybrid	Rolland T (2014)	1
SPEN	22	HDAC1	4	affinity chromatography technology, pull down	Shi Y (2001), Shi Y (2001)	2
RUNX1T1	1	HOMER3	0	two hybrid, two hybrid	Rolland T (2014), Yu H (2011)	2
KPNB1	3	RUNX1T1	1	pull down	Odaka Y (2000)	1
BSPRY	2	RUNX1T1	1	affinity chromatography technology	Huttlin EL (2017)	1
RUNX1T1	1	PCBD2	0	two hybrid	Ravasi T (2010)	1
RUNX1T1	1	RUNX1T1	1	pull down	Zhang J (2001)	1
TCF3	7	VDR	2	affinity chromatography technology	Kim MS (2007)	1
RUNX1T1	1	LZTS2	4	two hybrid	Rolland T (2014)	1
RUNX1T1	1	CCDC36	1	two hybrid	Rolland T (2014)	1
SPEN	22	UBE2E2	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Li J (2006), Li J (2006), Li J (2006), Li J (2006)	4
RUNX1T1	1	GSE1	14	two hybrid	Rolland T (2014)	1
HDAC3	5	BCL6	6	imaging technique, affinity chromatography technology, affinity chromatography technology	Xu F (2016), Xu F (2016), Xu F (2016)	3
DNMT1	5	RUNX1	0	affinity chromatography technology, imaging technique, two hybrid	Liu S (2005), Liu S (2005), Liu S (2005)	3
RUNX1T1	1	WBP11	0	two hybrid	Rual JF (2005)	1
BRCA1	7	HDAC1	4	pull down	Yarden RI (1999)	1
ZBTB16	4	VDR	2	affinity chromatography technology, affinity chromatography technology, pull down	Ward JO (2001), Puccetti E (2002), Puccetti E (2002)	3
RUNX1T1	1	LPXN	4	two hybrid, two hybrid	Rolland T (2014), Yu H (2011)	2
RUNX1T1	1	PRKAR2A	0	two hybrid, pull down, affinity chromatography technology	Fukuyama T (2001), Fukuyama T (2001), Fukuyama T (2001)	3
CBFA2T3	3	CBFA2T2	3	affinity chromatography technology	Hoogeveen AT (2002)	1
TRIM33	4	RUNX1T1	1	affinity chromatography technology	Bai X (2010)	1
TAL2	1	CBFA2T2	3	two hybrid	Ravasi T (2010)	1
TRIM42	0	CCDC36	1	two hybrid	Rolland T (2014)	1
RUNX1T1	1	TCF12	14	affinity chromatography technology, pull down	Zhang J (2004), Zhang J (2004)	2
NCOR2	12	RUNX1T1	1	two hybrid, affinity chromatography technology, pull down, two hybrid, pull down, pull down	Takahashi S (2004), Takahashi S (2004), Zhang J (2001), Gelmetti V (1998), Gelmetti V (1998), Gelmetti V (1998)	6
MID2	1	BRCA1	7	two hybrid	Hill SJ (2014)	1
SPEN	22	RUNX1T1	1	unspecified method, affinity chromatography technology, biochemical, two hybrid	Salat D (2008), Salat D (2008), Salat D (2008), Salat D (2008)	4
NCOR2	12	ZBTB16	4	two hybrid, affinity chromatography technology, pull down, pull down, pull down, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology	Takahashi S (2004), Takahashi S (2004), Wong CW (1998), Hong SH (1997), Hong SH (1997), Hong SH (1997), Melnick A (2002), Puccetti E (2005), Choi WI (2014)	9
ZBTB16	4	HDAC3	5	pull down, affinity chromatography technology	Chauchereau A (2004), Choi WI (2014)	2
RUNX1	0	CBFA2T2	3	affinity chromatography technology, affinity chromatography technology	Kitabayashi I (1998), Shia WJ (2012)	2
CBFA2T3	3	HDAC3	5	affinity chromatography technology, affinity chromatography technology	Hoogeveen AT (2002), Amann JM (2001)	2
TCF3	7	DNMT1	5	affinity chromatography technology	Kim MS (2007)	1
MID2	1	UBE2E2	1	two hybrid, two hybrid, two hybrid	Napolitano LM (2011), Napolitano LM (2011), Rolland T (2014)	3
SIN3A	13	RUNX1	0	affinity chromatography technology, affinity chromatography technology	Imai Y (2004), Imai Y (2004)	2
RUNX1T1	1	TRIM42	0	two hybrid	Rolland T (2014)	1
DNMT1	5	HDAC3	5	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
TCF4	26	RUNX1T1	1	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
RUNX1	0	CBFA2T3	3	affinity chromatography technology	Shia WJ (2012)	1
NCOR1	9	TRIM33	4	affinity chromatography technology	Yoon HG (2003)	1
TCF12	14	TCF3	7	affinity chromatography technology	Yoon SJ (2011)	1
RUNX1T1	1	SPRY2	4	two hybrid	Rolland T (2014)	1
NCOR2	12	SPEN	22	two hybrid, pull down, affinity chromatography technology, pull down, two hybrid	Shi Y (2001), Shi Y (2001), Shi Y (2001), Shi Y (2001), Albers M (2005)	5
RUNX1T1	1	ABI3	1	two hybrid, two hybrid	Rual JF (2005), Rolland T (2014)	2
CBFA2T3	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Hoogeveen AT (2002), Amann JM (2001)	2
NEUROG1	0	TCF4	26	two hybrid	Rolland T (2014)	1
RUNX1T1	1	BCL6	6	affinity chromatography technology, affinity chromatography technology	Chevallier N (2004), Chevallier N (2004)	2
HDAC1	4	BCL6	6	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	David G (1998), Deltour S (1999), Fujita N (2004), Fujita N (2004), Dhordain P (1998), Miles RR (2005)	6
VDR	2	RUNX1T1	1	pull down, affinity chromatography technology	Puccetti E (2002), Puccetti E (2002)	2
HDAC1	4	NCOR2	12	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Fischer DD (2002), Fischer DD (2002), Underhill C (2000), Wang L (2006)	4
RUNX1T1	1	ETS1	4	pull down	Giese K (1995)	1
GFI1	0	HDAC2	1	affinity chromatography technology	Saleque S (2007)	1
VDR	2	RUNX1	0	pull down, affinity chromatography technology	Puccetti E (2002), Puccetti E (2002)	2
ZBTB16	4	HDAC1	4	pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Chauchereau A (2004), David G (1998), David G (1998), David G (1998), David G (1998), Wong CW (1998), Melnick A (2002), Melnick A (2002), Puccetti E (2005), Thirkettle HJ (2009), Choi WI (2014), Girard N (2013)	12
HDAC2	1	DNMT1	5	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rountree MR (2000), Rountree MR (2000), Myant K (2008), Cui S (2011), Cai Y (2014), Cai Y (2014)	6
RUNX1	0	TCF3	7	affinity chromatography technology	Zhang J (2004)	1
MID2	1	TRIM42	0	two hybrid	Rolland T (2014)	1
STX11	1	MID2	1	two hybrid	Rolland T (2014)	1
NEUROG1	0	CBFA2T2	3	two hybrid	Ravasi T (2010)	1
RUNX1	0	RUNX1T1	1	biochemical, affinity chromatography technology	Minucci S (2000), Shia WJ (2012)	2
TCF4	26	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
RBPJ	1	NCOR2	12	two hybrid, two hybrid	Beatus P (2001), Zhou S (2001)	2
BRCA1	7	DNMT1	5	affinity chromatography technology	Hill SJ (2014)	1
RBPJ	1	HDAC2	1	affinity chromatography technology	Li X (2015)	1
ZBTB16	4	HDAC2	1	pull down	Chauchereau A (2004)	1
RUNX1T1	1	EPS8	1	two hybrid	Rolland T (2014)	1
HDAC3	5	RUNX1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Reed-Inderbitzin E (2006), Guo H (2011), Guo H (2011), Guo H (2011), Leong WY (2016)	5
RBPJ	1	SPEN	22	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Oswald F (2002), Salat D (2008), Huttlin EL (2015), Li X (2015), Huttlin EL (2017)	5
SPRY2	4	MID2	1	two hybrid	Rolland T (2014)	1
NCOR2	12	VDR	2	pull down, two hybrid	Puccetti E (2002), Tagami T (1998)	2
HDAC1	4	RUNX1T1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Amann JM (2001), Zhang J (2004), Gelmetti V (1998), Liu S (2007), Liu S (2007), Chen TC (2014)	6
ATN1	2	RUNX1T1	1	two hybrid, affinity chromatography technology, two hybrid	Wood JD (2000), Wood JD (2000), Lim J (2006)	3
HDAC8	9	RUNX1T1	1	affinity chromatography technology	Amann JM (2001)	1
NCOR1	9	RUNX1	0	pull down	Minucci S (2000)	1
RUNX1T1	1	CBFA2T2	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rual JF (2005), Lindberg SR (2003), Hoogeveen AT (2002), Zhang J (2004)	4
PSMC5	4	HOMER3	0	affinity chromatography technology, two hybrid, two hybrid	Rezvani K (2012), Rezvani K (2012), Rezvani K (2012)	3
NCOR2	12	SIN3A	13	biochemical, pull down	Li J (2000), Huang EY (2000)	2
KPNA1	5	RUNX1T1	1	pull down	Odaka Y (2000)	1
VDR	2	PSMC5	4	two hybrid, two hybrid	Masuyama H (1998), Albers M (2005)	2
RBPJ	1	SIN3A	13	pull down	Zhou S (2000)	1
HDAC1	4	GSE1	14	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
TRIM33	4	RUNX1	0	affinity chromatography technology	Bai X (2010)	1
RUNX1T1	1	CPSF7	4	two hybrid	Rolland T (2014)	1
NCOR1	9	CBFA2T3	3	affinity chromatography technology, affinity chromatography technology	Amann JM (2001), Olsson A (2008)	2
RUNX1T1	1	OTUD4	2	affinity chromatography technology	Ewing RM (2007)	1
645455	0	PRKAR2A	0	affinity chromatography technology	Hein MY (2015)	1
RUNX1	0	NCOR2	12	x-ray crystallography	Liu Y (2007)	1
CBFA2T2	3	PRDM14	1	two hybrid, two hybrid, affinity chromatography technology	Ravasi T (2010), Rolland T (2014), Huttlin EL (2017)	3
UBE2E2	1	RUNX1T1	1	pull down, affinity chromatography technology	Kraemer OH (2008), Kraemer OH (2008)	2
UBQLN4	2	RUNX1T1	1	two hybrid	Lim J (2006)	1
SYCE3	0	RUNX1T1	1	affinity chromatography technology	Huttlin EL (2017)	1
RUNX1T1	1	DNMT1	5	affinity chromatography technology, affinity chromatography technology, imaging technique, two hybrid	Liu S (2005), Liu S (2005), Liu S (2005), Liu S (2005)	4
RUNX1T1	1	BRCA1	7	two hybrid	Hill SJ (2014)	1
BCL6	6	SIN3A	13	pull down, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology	Wong CW (1998), Dhordain P (1998), Dhordain P (1998), Dhordain P (1998), Miles RR (2005)	5
TCF3	7	GSE1	14	affinity chromatography technology	Teachenor R (2012)	1
NCOR1	9	HDAC3	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, pull down, pull down, two hybrid, biochemical, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, two hybrid, imaging technique, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yoon HG (2003), Yoon HG (2003), Yoon HG (2003), Yoon HG (2003), Fischle W (2002), Fischle W (2002), Fischle W (2001), Zhang J (2002), Zhang J (2002), Zhang J (2002), Li J (2000), Li J (2000), Li J (2000), Li J (2000), Underhill C (2000), Alenghat T (2006), Jiang S (2006), Wen YD (2000), Wen YD (2000), Wen YD (2000), Liu XF (2004), Yoon HG (2005), Yoon HG (2005), Zhu P (2006), Bantscheff M (2011), Joshi P (2013)	26
NCOR1	9	SPEN	22	pull down	Ariyoshi M (2003)	1
DNMT1	5	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Robertson KD (2000), Achour M (2008), Achour M (2008), Kimura H (2003), Zhang Q (2005), Myant K (2008), Schnekenburger M (2007), Kang KA (2012), Cui S (2011), Cui S (2011), Hervouet E (2010), Cai Y (2014), Cai Y (2014), Yuan K (2016), Yuan K (2016)	15
RUNX1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Kraemer OH (2008), Shia WJ (2012)	2
RUNX1T1	1	STX11	1	two hybrid	Rolland T (2014)	1
HDAC8	9	CBFA2T3	3	affinity chromatography technology	Amann JM (2001)	1
MEOX2	2	SPRY2	4	two hybrid	Rolland T (2014)	1
RUNX1T1	1	NEUROG1	0	two hybrid	Ravasi T (2010)	1
RUNX1T1	1	TAL2	1	two hybrid	Ravasi T (2010)	1
TCF4	26	GSE1	14	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
HDAC2	1	KPNA1	5	affinity chromatography technology	Joshi P (2013)	1
ABI3	1	645455	0	two hybrid	Rual JF (2005)	1
TRIM33	4	CBFA2T3	3	affinity chromatography technology	Bai X (2010)	1
LZTS2	4	TRIM42	0	two hybrid	Rolland T (2014)	1
NCOR2	12	NCOR1	9	biochemical, two hybrid	Li J (2000), Korutla L (2005)	2
ZBTB16	4	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, pull down, affinity chromatography technology	David G (1998), David G (1998), David G (1998), David G (1998), Ward JO (2001), Wong CW (1998), Choi WI (2014)	7
BCL6	6	ZBTB16	4	pull down, two hybrid	Dhordain P (2000), Dhordain P (2000)	2
RUNX1T1	1	MID2	1	two hybrid	Rolland T (2014)	1
TRIM33	4	TCF3	7	affinity chromatography technology	Bai X (2010)	1
RUNX1T1	1	PRDM14	1	two hybrid, two hybrid, affinity chromatography technology	Ravasi T (2010), Rolland T (2014), Huttlin EL (2017)	3
NCOR1	9	ETS1	4	affinity chromatography technology	Myers E (2005)	1
HDAC3	5	CBFA2T2	3	affinity chromatography technology	Amann JM (2005)	1
TCF4	26	OTUD4	2	two hybrid	Rolland T (2014)	1
RUNX1T1	1	SPERT	0	two hybrid	Rolland T (2014)	1
SPERT	0	TRIM42	0	two hybrid	Rolland T (2014)	1
HDAC1	4	KPNA1	5	affinity chromatography technology	Joshi P (2013)	1
ATN1	2	CBFA2T2	3	two hybrid	Lim J (2006)	1
BCL6	6	NCOR1	9	two hybrid, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Huynh KD (2000), Melnick A (2002), Melnick A (2002), Fujita N (2004), Miles RR (2005)	5
BRCA1	7	ETS1	4	pull down	Chai Y (2001)	1
NCOR2	12	HDAC3	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yoon HG (2003), Yoon HG (2003), Guenther MG (2000), Guenther MG (2000), Guenther MG (2000), Fischle W (2002), Fischle W (2002), Guenther MG (2002), Guenther MG (2002), Guenther MG (2002), Guenther MG (2002), Li J (2000), Li J (2000), Li J (2000), Underhill C (2000), Guenther MG (2000), Guenther MG (2000), Kim MY (2006), Wang L (2006), Torres-Padilla ME (2002), Codina A (2005), Wen YD (2000), Rajendran P (2011), Liu A (2006), Bantscheff M (2011), Joshi P (2013), Xu F (2016)	27
HDAC3	5	RUNX1T1	1	affinity chromatography technology, affinity chromatography technology	Amann JM (2001), Zhang J (2004)	2
BCL6	6	NCOR2	12	two hybrid, pull down, pull down, pull down, x-ray crystallography, two hybrid, imaging technique, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, imaging technique, pull down, imaging technique, imaging technique, affinity chromatography technology	Huynh KD (2000), Wong CW (1998), Deltour S (1999), Ahmad KF (2003), Ahmad KF (2003), Ahmad KF (2003), Ahmad KF (2003), Melnick A (2002), Polo JM (2004), Fujita N (2004), Miles RR (2005), Dhordain P (1997), Dhordain P (1997), Dhordain P (1997), Hatzi K (2013), Hatzi K (2013), Xu F (2016), Xu F (2016)	18
TCF4	26	TAL2	1	two hybrid, two hybrid	Langlands K (1997), Rolland T (2014)	2
HDAC2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Fleischer TC (2003), Fleischer TC (2003), Hakimi MA (2003), Yang L (2003), Laherty CD (1997), Zhang Y (2002), Tong JK (1998), Zhang Y (2005), Nakamura T (2002), Sekhavat A (2007), Zou J (2004), Sun JM (2007), Xue Y (1998), Tsai SC (2002), Brandl A (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hsu DS (2014)	20
PSMC5	4	RUNX1T1	1	affinity chromatography technology	Huttlin EL (2017)	1
RUNX1T1	1	ZMYM4	4	two hybrid	Rolland T (2014)	1
RBPJ	1	RUNX1T1	1	affinity chromatography technology	Salat D (2008)	1
RUNX1T1	1	TCF3	7	affinity chromatography technology	Zhang J (2004)	1
HDAC2	1	GSE1	14	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Bantscheff M (2011), Joshi P (2013)	3
SPRY2	4	ZBTB16	4	two hybrid	Vinayagam A (2011)	1
BRCA1	7	UBE2E2	1	two hybrid, x-ray crystallography, pull down, two hybrid, pull down	Christensen DE (2009), Christensen DE (2009), Christensen DE (2009), Christensen DE (2007), David Y (2011)	5