PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000555447	[[81726999, 81728275], [81737013, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864924], [81893445, 81893556], [81893644, 81893748]]	[[81728125, 81728275], [81737013, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864726]]
ENST00000267540	[[81736850, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864927]]	[[81736908, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864726]]
ENST00000556280	[[81744819, 81745083], [81772975, 81773094], [81789846, 81790027]]	None
ENST00000553821	[[81734391, 81734841], [81737013, 81737216], [81743244, 81743277]]	[[81734757, 81734841], [81737013, 81737216], [81743244, 81743277]]
ENST00000555284	[[81736772, 81737216], [81743244, 81745162]]	None
ENST00000555226	[[81861293, 81862522], [81864638, 81864924], [81884506, 81884597]]	None
ENST00000557055	[[81862461, 81862522], [81864638, 81864924], [81893445, 81893556], [81902664, 81902809]]	[[81862461, 81862522], [81864638, 81864726]]
ENST00000554710	[[81864716, 81864924], [81893445, 81893556], [81902431, 81902551]]	[[81864716, 81864726]]
NM_033104	[[81726993, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864924], [81893445, 81893556]]	[[81736908, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864726]]
NM_001256430	[[81726993, 81728275], [81737013, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864924], [81893445, 81893556], [81893644, 81893748]]	[[81728125, 81728275], [81737013, 81737216], [81743244, 81745083], [81837331, 81837529], [81862237, 81862522], [81864638, 81864726]]

Promoter

Chrom	Start	End	Description
chr14	81790486	81790538	CAGE_peak_1_at_STON2_5end
chr14	81893690	81893700	CAGE_peak_10_at_STON2_5end
chr14	81893734	81893794	CAGE_peak_3_at_STON2_5end
chr14	81893797	81893814	CAGE_peak_4_at_STON2_5end
chr14	81893881	81893896	CAGE_peak_7_at_STON2_5end
chr14	81894113	81894122	CAGE_peak_5_at_STON2_5end
chr14	81902516	81902528	CAGE_peak_6_at_STON2_5end
chr14	81902791	81902825	CAGE_peak_2_at_STON2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I081415	81415819	81416911	1.02	[{'connected_gene': 'STON2', 'score': 7.66}, {'connected_gene': 'DYNLL1P2', 'score': 0.77}]
chr14	GH14I081433	81433415	81434158	0.62	[{'connected_gene': 'STON2', 'score': 0.77}, {'connected_gene': 'DYNLL1P2', 'score': 0.34}]
chr14	GH14I081432	81432277	81432426	0.92	[{'connected_gene': 'STON2', 'score': 0.77}, {'connected_gene': 'DYNLL1P2', 'score': 0.37}]
chr14	GH14I081407	81407017	81407166	0.49	[{'connected_gene': 'STON2', 'score': 4.71}, {'connected_gene': 'GC14P081410', 'score': 0.77}, {'connected_gene': 'RPS24P3', 'score': 0.19}]
chr14	GH14I081392	81392731	81394292	0.4	[{'connected_gene': 'STON2', 'score': 5.65}, {'connected_gene': 'GC14P081410', 'score': 0.37}, {'connected_gene': 'RPS24P3', 'score': 0.21}]
chr14	GH14I081381	81381908	81383432	0.46	[{'connected_gene': 'STON2', 'score': 5.0}, {'connected_gene': 'GC14P081410', 'score': 0.31}, {'connected_gene': 'RPS24P3', 'score': 0.25}]
chr14	GH14I081434	81434277	81437366	1.68	[{'connected_gene': 'STON2', 'score': 554.99}, {'connected_gene': 'GTF2A1', 'score': 11.34}, {'connected_gene': 'LINC02308', 'score': 4.67}, {'connected_gene': 'DYNLL1P2', 'score': 0.34}]
chr14	GH14I081398	81398535	81403022	2.17	[{'connected_gene': 'STON2', 'score': 555.48}, {'connected_gene': 'GTF2A1', 'score': 12.83}, {'connected_gene': 'LINC02308', 'score': 4.56}, {'connected_gene': 'GC14P081410', 'score': 0.44}, {'connected_gene': 'RPS24P3', 'score': 0.2}]
chr14	GH14I081437	81437457	81437606	0.52	[{'connected_gene': 'STON2', 'score': 550.77}, {'connected_gene': 'GTF2A1', 'score': 11.34}, {'connected_gene': 'LINC02308', 'score': 0.39}]
chr14	GH14I081422	81422801	81428583	1.87	[{'connected_gene': 'STON2', 'score': 557.75}, {'connected_gene': 'LINC02308', 'score': 5.73}, {'connected_gene': 'DYNLL1P2', 'score': 0.39}]
chr14	GH14I081413	81413196	81413255	0.7	[{'connected_gene': 'DYNLL1P2', 'score': 550.77}, {'connected_gene': 'STON2', 'score': 550.34}]
chr14	GH14I081417	81417097	81417186	0.56	[{'connected_gene': 'DYNLL1P2', 'score': 0.77}, {'connected_gene': 'STON2', 'score': 0.37}]
chr14	GH14I081128	81128934	81129188	0.24	[{'connected_gene': 'SNORA79', 'score': 10.31}, {'connected_gene': 'GTF2A1', 'score': 10.28}, {'connected_gene': 'CEP128', 'score': 9.96}, {'connected_gene': 'TSHR', 'score': 8.43}, {'connected_gene': 'STON2', 'score': 1.33}, {'connected_gene': 'LOC105370594', 'score': 0.28}, {'connected_gene': 'LOC101928462', 'score': 0.26}, {'connected_gene': 'NMNAT1P1', 'score': 0.15}]
chr14	GH14I081130	81130728	81131014	0.22	[{'connected_gene': 'SNORA79', 'score': 10.31}, {'connected_gene': 'GTF2A1', 'score': 10.28}, {'connected_gene': 'CEP128', 'score': 9.95}, {'connected_gene': 'TSHR', 'score': 5.04}, {'connected_gene': 'STON2', 'score': 1.31}, {'connected_gene': 'LOC105370594', 'score': 0.28}, {'connected_gene': 'LOC101928462', 'score': 0.26}, {'connected_gene': 'NMNAT1P1', 'score': 0.15}]
chr14	GH14I081320	81320752	81325156	1.1	[{'connected_gene': 'NMNAT1P1', 'score': 4.09}, {'connected_gene': 'GC14M081333', 'score': 0.39}, {'connected_gene': 'GC14M081294', 'score': 0.31}, {'connected_gene': 'STON2', 'score': 0.14}]
chr14	GH14I081363	81363422	81364746	0.2	[{'connected_gene': 'RPS24P3', 'score': 0.29}, {'connected_gene': 'GC14P081410', 'score': 0.25}, {'connected_gene': 'STON2', 'score': 0.19}]
chr14	GH14I081366	81366397	81366546	0.2	[{'connected_gene': 'RPS24P3', 'score': 0.29}, {'connected_gene': 'GC14P081410', 'score': 0.26}, {'connected_gene': 'STON2', 'score': 0.2}]
chr14	GH14I081269	81269401	81269800	0.91	[{'connected_gene': 'UNGP3', 'score': 0.44}, {'connected_gene': 'GC14M081259', 'score': 0.44}, {'connected_gene': 'PIR41338', 'score': 0.44}, {'connected_gene': 'STON2', 'score': 0.1}]
chr14	GH14I081267	81267663	81268954	0.8	[{'connected_gene': 'GTF2A1', 'score': 11.77}, {'connected_gene': 'UNGP3', 'score': 0.44}, {'connected_gene': 'GC14M081259', 'score': 0.44}, {'connected_gene': 'PIR41338', 'score': 0.44}, {'connected_gene': 'STON2', 'score': 0.1}]
chr14	GH14I080908	80908835	80909221	0.24	[{'connected_gene': 'CEP128', 'score': 6.34}, {'connected_gene': 'STON2', 'score': 3.41}, {'connected_gene': 'PIR53916', 'score': 0.77}, {'connected_gene': 'TSHR', 'score': 0.25}]
chr14	GH14I081429	81429659	81431302	0.57	[{'connected_gene': 'LINC02308', 'score': 6.03}, {'connected_gene': 'STON2', 'score': 0.44}, {'connected_gene': 'DYNLL1P2', 'score': 0.37}]
chr14	GH14I081446	81446813	81447666	0.2	[{'connected_gene': 'LINC02308', 'score': 0.77}, {'connected_gene': 'STON2', 'score': 0.39}]
chr14	GH14I081448	81448611	81451209	0.86	[{'connected_gene': 'LINC02308', 'score': 550.77}, {'connected_gene': 'STON2', 'score': 0.39}]
chr14	GH14I081385	81385903	81386919	0.43	[{'connected_gene': 'GC14P081410', 'score': 0.34}, {'connected_gene': 'STON2', 'score': 0.23}, {'connected_gene': 'RPS24P3', 'score': 0.23}]
chr14	GH14I081408	81408717	81408866	0.72	[{'connected_gene': 'GC14P081410', 'score': 550.77}, {'connected_gene': 'STON2', 'score': 5.77}, {'connected_gene': 'RPS24P3', 'score': 0.18}]
chr14	GH14I081396	81396237	81396426	0.51	[{'connected_gene': 'GC14P081410', 'score': 0.39}, {'connected_gene': 'STON2', 'score': 0.26}, {'connected_gene': 'RPS24P3', 'score': 0.21}]
chr14	GH14I081301	81301992	81302086	0.2	[{'connected_gene': 'GC14M081294', 'score': 0.77}, {'connected_gene': 'GC14M081333', 'score': 0.29}, {'connected_gene': 'STON2', 'score': 0.12}]
chr14	GH14I081325	81325531	81327297	0.38	[{'connected_gene': 'GC14M081333', 'score': 0.44}, {'connected_gene': 'GC14M081294', 'score': 0.31}, {'connected_gene': 'STON2', 'score': 0.14}]
chr14	GH14I081302	81302123	81305259	1.43	[{'connected_gene': 'GC14M081294', 'score': 0.44}, {'connected_gene': 'GC14M081333', 'score': 0.31}, {'connected_gene': 'STON2', 'score': 0.12}]
chr14	GH14I081311	81311228	81316648	0.83	[{'connected_gene': 'GC14M081294', 'score': 0.37}, {'connected_gene': 'GC14M081333', 'score': 0.37}, {'connected_gene': 'STON2', 'score': 0.13}]
chr14	GH14I081328	81328625	81332419	0.66	[{'connected_gene': 'GC14M081333', 'score': 0.77}, {'connected_gene': 'GC14M081294', 'score': 0.29}, {'connected_gene': 'STON2', 'score': 0.14}]
chr14	GH14I081275	81275406	81276817	0.59	[{'connected_gene': 'PIR41338', 'score': 550.77}, {'connected_gene': 'UNGP3', 'score': 0.37}, {'connected_gene': 'GC14M081259', 'score': 0.37}, {'connected_gene': 'STON2', 'score': 0.1}]
chr14	GH14I081274	81274248	81274528	0.38	[{'connected_gene': 'PIR41338', 'score': 0.77}, {'connected_gene': 'UNGP3', 'score': 0.39}, {'connected_gene': 'GC14M081259', 'score': 0.39}, {'connected_gene': 'STON2', 'score': 0.1}]