PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000259803	[[52991761, 52993744], [52995600, 52995729], [52996804, 52996917], [52998869, 52999122], [53010355, 53010566], [53013551, 53013627]]	[[52993003, 52993744], [52995600, 52995729], [52996804, 52996917], [52998869, 52999122], [53010355, 53010430]]
NM_003643	[[52991758, 52993744], [52995600, 52995729], [52996804, 52996917], [52998869, 52999122], [53010355, 53010566], [53013551, 53013624]]	[[52993003, 52993744], [52995600, 52995729], [52996804, 52996917], [52998869, 52999122], [53010355, 53010430]]

Promoter

Chrom	Start	End	Description
chr6	53013605	53013616	CAGE_peak_2_at_GCM1_5end
chr6	53013620	53013644	CAGE_peak_1_at_GCM1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I053119	53119044	53120832	1.1	[{'connected_gene': 'GCM1', 'score': 12.26}, {'connected_gene': 'RNU6-464P', 'score': 12.24}, {'connected_gene': 'ENSG00000218713', 'score': 11.31}, {'connected_gene': 'ICK', 'score': 5.2}, {'connected_gene': 'ENSG00000261745', 'score': 0.44}, {'connected_gene': 'PIR53393', 'score': 0.31}]
chr6	GH06I053148	53148820	53148879	0.73	[{'connected_gene': 'GCM1', 'score': 550.77}, {'connected_gene': 'GC06M053154', 'score': 0.44}, {'connected_gene': 'RNU6-464P', 'score': 0.44}]
chr6	GH06I053147	53147921	53147980	0.5	[{'connected_gene': 'GCM1', 'score': 550.77}, {'connected_gene': 'ENSG00000261745', 'score': 0.34}]
chr6	GH06I053213	53213893	53218333	0.43	[{'connected_gene': 'ENSG00000218713', 'score': 19.76}, {'connected_gene': 'GCM1', 'score': 12.87}, {'connected_gene': 'GC06P053222', 'score': 0.77}, {'connected_gene': 'GC06P053224', 'score': 0.77}, {'connected_gene': 'PIR36996', 'score': 0.77}]
chr6	GH06I053134	53134879	53135152	0.93	[{'connected_gene': 'ENSG00000218713', 'score': 11.09}, {'connected_gene': 'ENSG00000261745', 'score': 0.44}, {'connected_gene': 'GCM1', 'score': 0.39}]
chr6	GH06I053218	53218840	53221401	0.2	[{'connected_gene': 'GC06P053222', 'score': 550.77}, {'connected_gene': 'GC06P053224', 'score': 550.77}, {'connected_gene': 'RNU1-136P', 'score': 550.77}, {'connected_gene': 'ENSG00000218713', 'score': 16.03}, {'connected_gene': 'GCM1', 'score': 12.24}, {'connected_gene': 'GC06M053235', 'score': 0.37}]