PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367592	[[143771943, 143772252], [143784052, 143784134], [143789258, 143789302], [143792097, 143792222], [143792519, 143792586], [143792693, 143792748], [143793296, 143793398]]	[[143772179, 143772252], [143784052, 143784134], [143789258, 143789302], [143792097, 143792222], [143792519, 143792586], [143792693, 143792748], [143793296, 143793398]]
ENST00000367591	[[143772116, 143772252], [143780221, 143780353], [143784052, 143784134], [143789258, 143789302], [143792097, 143792222], [143792519, 143792586], [143792693, 143792748], [143793296, 143793465], [143795922, 143795993], [143800212, 143800335], [143806288, 143806385], [143810279, 143811147]]	[[143772179, 143772252], [143780221, 143780353], [143784052, 143784134], [143789258, 143789302], [143792097, 143792222], [143792519, 143792586], [143792693, 143792748], [143793296, 143793465], [143795922, 143795993], [143800212, 143800335], [143806288, 143806385], [143810279, 143810363]]
ENST00000585848	[[143806208, 143806385], [143810279, 143810510]]	None
NM_003630	[[143771917, 143772252], [143780221, 143780353], [143784052, 143784134], [143789258, 143789302], [143792097, 143792222], [143792519, 143792586], [143792693, 143792748], [143793296, 143793465], [143795922, 143795993], [143800212, 143800335], [143806288, 143806385], [143810279, 143811753]]	[[143772179, 143772252], [143780221, 143780353], [143784052, 143784134], [143789258, 143789302], [143792097, 143792222], [143792519, 143792586], [143792693, 143792748], [143793296, 143793465], [143795922, 143795993], [143800212, 143800335], [143806288, 143806385], [143810279, 143810363]]

Promoter

Chrom	Start	End	Description
chr6	143771914	143771927	CAGE_peak_4_at_PEX3_5end
chr6	143771934	143771948	CAGE_peak_2_at_PEX3_5end
chr6	143771966	143772029	CAGE_peak_1_at_PEX3_5end
chr6	143772033	143772058	CAGE_peak_3_at_PEX3_5end
chr6	143772060	143772071	CAGE_peak_5_at_PEX3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I143288	143288037	143289537	0.2	[{'connected_gene': 'PEX3', 'score': 4.58}, {'connected_gene': 'ENSG00000217495', 'score': 0.39}, {'connected_gene': 'ENSG00000225752', 'score': 0.09}, {'connected_gene': 'AIG1', 'score': 0.07}]
chr6	GH06I143449	143449189	143452223	2.42	[{'connected_gene': 'ADAT2', 'score': 623.45}, {'connected_gene': 'PEX3', 'score': 555.92}, {'connected_gene': 'RNA5SP221', 'score': 550.77}, {'connected_gene': 'LTV1', 'score': 98.85}, {'connected_gene': 'ENSG00000270890', 'score': 61.94}, {'connected_gene': 'VDAC1P8', 'score': 42.01}, {'connected_gene': 'PLAGL1', 'score': 30.51}, {'connected_gene': 'TUBB8P2', 'score': 27.4}]
chr6	GH06I142819	142818797	142823485	1.53	[{'connected_gene': 'VDAC1P8', 'score': 20.66}, {'connected_gene': 'ADAT2', 'score': 13.04}, {'connected_gene': 'PEX3', 'score': 9.67}, {'connected_gene': 'ADGRG6', 'score': 4.52}, {'connected_gene': 'HIVEP2', 'score': 4.47}, {'connected_gene': 'ENSG00000237851', 'score': 0.29}, {'connected_gene': 'LOC105369170', 'score': 0.14}]