PPI network (data source: BioGrid)

Symbol A GeneA coding DNM count Symbol B GeneB coding DNM count Interaction detection method Publication Evidence
UCHL3 1 ZRANB2 0 biochemical Havugimana PC (2012) 1
UBE4B 5 UBL7 0 biochemical, biochemical, affinity chromatography technology, affinity chromatography technology Havugimana PC (2012), Kristensen AR (2012), Huttlin EL (2015), Huttlin EL (2017) 4
HDAC6 0 USP9X 15 affinity chromatography technology Joshi P (2013) 1
UBL7 0 ZRANB2 0 biochemical Havugimana PC (2012) 1
UBE4B 5 UCHL3 1 biochemical Havugimana PC (2012) 1
USP9X 15 ZYX 2 biochemical Havugimana PC (2012) 1
AHCYL1 2 ZYX 2 biochemical Havugimana PC (2012) 1
AHCYL1 2 UBL7 0 biochemical Havugimana PC (2012) 1
KDELR1 1 UBL7 0 affinity chromatography technology Huttlin EL (2017) 1
UBQLN2 0 UBC 7 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Chang L (2015), Hjerpe R (2016), Hjerpe R (2016) 3
USP34 7 ZRANB2 0 biochemical Havugimana PC (2012) 1
AHCYL1 2 ZRANB2 0 biochemical Havugimana PC (2012) 1
AHCYL1 2 UBQLN1 1 biochemical Havugimana PC (2012) 1
UBL7 0 VCP 6 affinity chromatography technology Huttlin EL (2017) 1
UBQLN1 1 ZRANB2 0 biochemical Havugimana PC (2012) 1
RAD23B 1 UBQLN1 1 biochemical, biochemical Havugimana PC (2012), Wan C (2015) 2
HDAC6 0 RAD23B 1 affinity chromatography technology, affinity chromatography technology New M (2013), New M (2013) 2
UBL7 0 HSPA4L 1 biochemical Wan C (2015) 1
UBC 7 VCP 6 affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down Matsumoto M (2005), Zhong X (2006), Dai RM (2001), Bish RA (2007), Lim JJ (2016), Zhang X (2017) 6
RAD23A 1 UBC 7 pull down, pull down, x-ray crystallography, pull down, x-ray crystallography, affinity chromatography technology, pull down, pull down, unspecified method, pull down, pull down, pull down, affinity chromatography technology, pull down, pull down, x-ray crystallography, pull down, pull down, pull down, x-ray crystallography, pull down, pull down Kang Y (2006), Sims JJ (2009), Kang Y (2007), Kang Y (2007), Wang Q (2003), Scanlon TC (2009), Raasi S (2003), Sokratous K (2012), Varadan R (2005), Fenner BJ (2009), Raasi S (2005), Massey LK (2004), Chen L (2006), Nathan JA (2013), Nathan JA (2013), Jung J (2014), Goh AM (2008), Castaneda CA (2013), Nakasone MA (2013), Lai MY (2012), Kristariyanto YA (2015), Zhang X (2017) 22
UBL7 0 ZYX 2 biochemical Havugimana PC (2012) 1
ERCC1 1 TWF2 2 biochemical Wan C (2015) 1
UBL7 0 SNF8 2 biochemical Wan C (2015) 1
KDELR1 1 UBQLN1 1 affinity chromatography technology Huttlin EL (2017) 1
TTC9C 2 ZRANB2 0 biochemical Havugimana PC (2012) 1
FBXW11 2 UBL7 0 affinity chromatography technology Low TY (2014) 1
PIR 0 UBL7 0 biochemical Havugimana PC (2012) 1
DCUN1D5 0 TLN2 10 biochemical Wan C (2015) 1
PPM1B 2 VCP 6 affinity chromatography technology, affinity chromatography technology Ewing RM (2007), Fogeron ML (2013) 2
DIAPH1 4 HSPA4L 1 biochemical Havugimana PC (2012) 1
UCHL3 1 USP9X 15 biochemical Havugimana PC (2012) 1
TWF2 2 CAPZB 2 affinity chromatography technology Ewing RM (2007) 1
USP34 7 UBQLN1 1 biochemical Havugimana PC (2012) 1
HDAC6 0 UBC 7 affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology Pai MT (2007), Pozo FM (2011), Sekimoto T (2010), Kovacs JJ (2004), Hao R (2013), Lee JH (2013), Nakashima H (2014), Banerjee I (2014), Hao R (2013), Zhang X (2017), Yu Q (2018) 11
UCHL3 1 ZYX 2 biochemical Havugimana PC (2012) 1
SSSCA1 0 UBE2D1 0 biochemical Havugimana PC (2012) 1
SSSCA1 0 UBQLN1 1 biochemical Havugimana PC (2012) 1
SSSCA1 0 USP34 7 biochemical Havugimana PC (2012) 1
VCP 6 FBXW11 2 affinity chromatography technology Li JM (2013) 1
RAD23A 1 UBQLN1 1 x-ray crystallography, affinity chromatography technology, biochemical Kang Y (2007), Kang Y (2007), Wan C (2015) 3
UBE2D1 0 ZPR1 1 biochemical Havugimana PC (2012) 1
UBQLN2 0 RAD23A 1 biochemical Wan C (2015) 1
UBL7 0 HDAC6 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
ERCC1 1 UBL7 0 two hybrid, two hybrid Rual JF (2005), Rolland T (2014) 2
SSSCA1 0 USP9X 15 biochemical Havugimana PC (2012) 1
UBE4B 5 ZPR1 1 biochemical Havugimana PC (2012) 1
SSSCA1 0 UBE4B 5 biochemical Havugimana PC (2012) 1
UBE2D1 0 USP34 7 biochemical Havugimana PC (2012) 1
AHCYL1 2 UCHL3 1 biochemical Havugimana PC (2012) 1
USP34 7 UBQLN2 0 biochemical Havugimana PC (2012) 1
CD4 1 VCP 6 affinity chromatography technology Magadan JG (2012) 1
SSSCA1 0 TTC9C 2 biochemical Havugimana PC (2012) 1
DIAPH1 4 TLN2 10 biochemical Wan C (2015) 1
UBL7 0 USP9X 15 biochemical Havugimana PC (2012) 1
UBQLN2 0 UBQLN1 1 two hybrid, affinity chromatography technology Ford DL (2006), Ford DL (2006) 2
UBL7 0 RAD23B 1 affinity chromatography technology Huttlin EL (2017) 1
SNF8 2 TLN2 10 biochemical Wan C (2015) 1
UBL7 0 UBQLN1 1 biochemical Havugimana PC (2012) 1
SSSCA1 0 UBL7 0 biochemical Havugimana PC (2012) 1
UBL7 0 AMY1C 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
UBQLN1 1 VCP 6 pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Lim PJ (2009), Yu CC (2013), Lim PJ (2009), Lim PJ (2009) 4
IDH1 0 UBL7 0 two hybrid Daakour S (2016) 1
RAD23A 1 RAD23B 1 biochemical, affinity chromatography technology van der Spek PJ (1996), Hsieh HC (2005) 2
FBXW11 2 DDX3X 52 affinity chromatography technology Low TY (2014) 1
UBE2D1 0 UBE4B 5 biochemical Havugimana PC (2012) 1
DIAPH1 4 UBL7 0 biochemical Wan C (2015) 1
TTC9C 2 UCHL3 1 biochemical Havugimana PC (2012) 1
CD4 1 DDX3X 52 affinity chromatography technology Bernhard OK (2004) 1
PPP1R14C 0 UBL7 0 biochemical Havugimana PC (2012) 1
DDX3X 52 IMPDH1 2 biochemical, biochemical Havugimana PC (2012), Wan C (2015) 2
UBQLN2 0 ZRANB2 0 biochemical Havugimana PC (2012) 1
UBL7 0 ZPR1 1 biochemical Havugimana PC (2012) 1
UBE4B 5 USP34 7 biochemical Havugimana PC (2012) 1
SSSCA1 0 ZYX 2 biochemical Havugimana PC (2012) 1
TTC9C 2 UBE4B 5 biochemical Havugimana PC (2012) 1
AHCYL1 2 UBE2D1 0 biochemical Havugimana PC (2012) 1
HSPA5 0 HSPA4L 1 affinity chromatography technology Hein MY (2015) 1
UBL7 0 UBC 7 x-ray crystallography, pull down, pull down Chang YG (2006), Fenner BJ (2009), Zhang X (2017) 3
PSME1 1 UBL7 0 biochemical Havugimana PC (2012) 1
UBB 4 UBQLN1 1 two hybrid Rolland T (2014) 1
UBQLN1 1 USP9X 15 biochemical Havugimana PC (2012) 1
UBQLN2 0 USP9X 15 biochemical Havugimana PC (2012) 1
CAPN7 1 UBL7 0 two hybrid Rolland T (2014) 1
UBE2D1 0 UBC 7 x-ray crystallography Bosanac I (2010) 1
CD4 1 UBL7 0 two hybrid Wang J (2011) 1
ZPR1 1 ZYX 2 biochemical Havugimana PC (2012) 1
USP9X 15 UBC 7 unspecified method, pull down Ernst A (2013), Kwasna D (2018) 2
UBE4B 5 USP9X 15 biochemical Havugimana PC (2012) 1
HSPA5 0 HDAC6 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Rao R (2010), Rao R (2010), New M (2013) 3
SSSCA1 0 ZPR1 1 biochemical Havugimana PC (2012) 1
TLN2 10 TWF2 2 biochemical Havugimana PC (2012) 1
AHCYL1 2 USP34 7 biochemical Havugimana PC (2012) 1
CDKN2A 1 UBL7 0 two hybrid Daakour S (2016) 1
UBE4B 5 VPS29 0 biochemical Havugimana PC (2012) 1
IMPDH1 2 UBL7 0 biochemical Wan C (2015) 1
FBXW11 2 UBE4B 5 affinity chromatography technology, affinity chromatography technology Kim TY (2014), Loveless TB (2015) 2
SSSCA1 0 UCHL3 1 biochemical Havugimana PC (2012) 1
UPF1 8 UBL7 0 biochemical Wan C (2015) 1
UBE2D1 0 USP9X 15 biochemical, biochemical Havugimana PC (2012), You J (2001) 2
USP34 7 UCHL3 1 biochemical Havugimana PC (2012) 1
UBE4B 5 UBQLN1 1 biochemical, biochemical Havugimana PC (2012), Wan C (2015) 2
USP34 7 USP9X 15 biochemical Havugimana PC (2012) 1
UBL7 0 UCHL3 1 biochemical Havugimana PC (2012) 1
PPM1B 2 UBL7 0 biochemical Havugimana PC (2012) 1
UBC 7 CDKN2A 1 pull down, imaging technique Zhang X (2017), Zhang X (2017) 2
CLUH 8 UBL7 0 biochemical Wan C (2015) 1
UBE4B 5 RAD23A 1 pull down Goh AM (2008) 1
HSPA5 0 UBL7 0 biochemical Wan C (2015) 1
UBL7 0 VPS29 0 biochemical Havugimana PC (2012) 1
UBC 7 UBQLN1 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, two hybrid, pull down, two hybrid, pull down, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology Matsumoto M (2005), Ko HS (2004), Ko HS (2004), Sokratous K (2012), Raasi S (2005), Raasi S (2005), Massey LK (2004), Ko HS (2004), Ko HS (2004), Rolland T (2014), Castaneda CA (2013), Nakayasu ES (2013), Nakayasu ES (2013), Kristariyanto YA (2015), Kristariyanto YA (2015), Kurlawala Z (2017) 16
SSSCA1 0 UBQLN2 0 biochemical Havugimana PC (2012) 1
UBC 7 RAD23B 1 affinity chromatography technology, x-ray crystallography, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, pull down, pull down Matsumoto M (2005), Ryu KS (2003), Chen L (2006), Nathan JA (2013), Nathan JA (2013), Nakayasu ES (2013), Nakayasu ES (2013), Kristariyanto YA (2015), Zhang X (2017) 9
TWF2 2 UBL7 0 biochemical Havugimana PC (2012) 1
UBE4B 5 VCP 6 affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Matsumoto M (2004), Matsumoto M (2004), Boehm S (2011), Takahata M (2008), Morreale G (2009), Fernandez-Saiz V (2010), Fernandez-Saiz V (2010), Raman M (2015), Wang T (2016), Huttlin EL (2017) 10
UBL7 0 USP34 7 biochemical Havugimana PC (2012) 1
UBQLN1 1 UCHL3 1 biochemical Havugimana PC (2012) 1
RAD23A 1 UBL7 0 two hybrid Rual JF (2005) 1
UBL7 0 DDX3X 52 biochemical Wan C (2015) 1
AHCYL1 2 ZPR1 1 biochemical Havugimana PC (2012) 1
RAD23A 1 VCP 6 affinity chromatography technology Laco MN (2012) 1
UBC 7 HSPA5 0 pull down Nathan JA (2013) 1
VCP 6 HSPA5 0 affinity chromatography technology Yu CC (2013) 1
UPF1 8 DIAPH1 4 biochemical Wan C (2015) 1
AHCYL1 2 USP9X 15 biochemical Havugimana PC (2012) 1
CDKN2A 1 UBE4B 5 pull down Souza-Rodrigues E (2007) 1
AP1G1 8 UBL7 0 two hybrid Rolland T (2014) 1
UBL7 0 UBB 4 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
VBP1 0 UBL7 0 two hybrid, affinity chromatography technology Rolland T (2014), Huttlin EL (2017) 2
VCP 6 UBB 4 affinity chromatography technology, affinity chromatography technology Yu CC (2013), Fogeron ML (2013) 2
SSSCA1 0 ZRANB2 0 biochemical Havugimana PC (2012) 1
UBE4B 5 ZRANB2 0 biochemical Havugimana PC (2012) 1
CAPZB 2 UBL7 0 biochemical Wan C (2015) 1
VBP1 0 UBQLN2 0 biochemical Kristensen AR (2012) 1
UBE2D1 0 UBQLN1 1 biochemical Havugimana PC (2012) 1
UBE2D1 0 UBL7 0 biochemical Havugimana PC (2012) 1
UBE2D1 0 HDAC6 0 enzymatic study Hoeller D (2007) 1
HDAC6 0 DDX3X 52 affinity chromatography technology Watson GW (2016) 1
UCHL3 1 UBC 7 enzymatic study, enzymatic study, enzymatic study, x-ray crystallography, pull down, x-ray crystallography, pull down, enzymatic study, pull down, pull down, enzymatic study, enzymatic study, pull down, pull down, enzymatic study, pull down, pull down Bremm A (2010), Boudreaux D (2012), Misaghi S (2005), Misaghi S (2005), Wilkinson KD (1999), Wilkinson KD (1999), Phillips AH (2013), Larsen CN (1998), Wada H (1998), Hemelaar J (2004), Altun M (2015), Flierman D (2016), Zhang X (2017), Kwasna D (2018), Lee YC (2017), Lee YC (2017), Hanpude P (2017) 17
AHCYL1 2 UBE4B 5 biochemical Havugimana PC (2012) 1
UBC 7 USP34 7 pull down Kwasna D (2018) 1
VBP1 0 VCP 6 affinity chromatography technology, affinity chromatography technology Xu Y (2013), Xu Y (2013) 2
HSPA5 0 AHCYL1 2 biochemical Havugimana PC (2012) 1
RAD23B 1 UBE4B 5 affinity chromatography technology Huttlin EL (2017) 1
RAD23B 1 ZYX 2 biochemical Wan C (2015) 1
UBL7 0 UBQLN2 0 biochemical Havugimana PC (2012) 1
DCUN1D5 0 UBL7 0 biochemical Wan C (2015) 1
AHCYL1 2 TTC9C 2 biochemical Havugimana PC (2012) 1
TTC9C 2 UBL7 0 biochemical Havugimana PC (2012) 1
UBQLN2 0 RAD23B 1 biochemical Wan C (2015) 1
FBXW11 2 UPF1 8 bioid Coyaud E (2015) 1
UBL7 0 TLN2 10 biochemical Wan C (2015) 1