Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000373783 [[64564515, 64568238]] [[64564819, 64565632]]
NM_032804 [[64564515, 64568239]] [[64564819, 64565632]]
Promoter
Chrom Start End Description
chr10 64564453 64564467 CAGE_peak_3_at_ADO_5end
chr10 64564469 64564535 CAGE_peak_2_at_ADO_5end
chr10 64564589 64564715 CAGE_peak_1_at_ADO_5end
chr10 64564798 64564848 CAGE_peak_4_at_ADO_5end
chr10 64564895 64564967 CAGE_peak_5_at_ADO_5end

Enhancer
Chrom Start End Genehancer ID Score Attributes
chr10 GH10I062772 62772105 62772935 0.54 [{'connected_gene': 'ADO', 'score': 26.06}, {'connected_gene': 'ENSG00000238280', 'score': 11.37}, {'connected_gene': 'GC10P062785', 'score': 0.39}, {'connected_gene': 'ALDH7A1P4', 'score': 0.29}]
chr10 GH10I062765 62765923 62767013 0.2 [{'connected_gene': 'ADO', 'score': 11.62}, {'connected_gene': 'ENSG00000238280', 'score': 11.62}, {'connected_gene': 'GC10P062785', 'score': 0.37}, {'connected_gene': 'ALDH7A1P4', 'score': 0.31}]
chr10 GH10I062769 62769366 62770177 0.72 [{'connected_gene': 'ADO', 'score': 11.64}, {'connected_gene': 'ENSG00000238280', 'score': 11.62}, {'connected_gene': 'GC10P062785', 'score': 0.37}, {'connected_gene': 'ALDH7A1P4', 'score': 0.31}]
chr10 GH10I062492 62492072 62493200 0.8 [{'connected_gene': 'ADO', 'score': 9.98}, {'connected_gene': 'ENSG00000238280', 'score': 9.98}, {'connected_gene': 'GC10M062430', 'score': 0.22}, {'connected_gene': 'ZNF365', 'score': 0.13}, {'connected_gene': 'LOC105378327', 'score': 0.1}]
chr10 GH10I062494 62494000 62494401 0.38 [{'connected_gene': 'ADO', 'score': 9.98}, {'connected_gene': 'ENSG00000238280', 'score': 9.98}, {'connected_gene': 'GC10M062430', 'score': 0.21}, {'connected_gene': 'ZNF365', 'score': 0.13}, {'connected_gene': 'LOC105378327', 'score': 0.1}]
chr10 GH10I062802 62802907 62806637 2.25 [{'connected_gene': 'ADO', 'score': 568.11}, {'connected_gene': 'ENSG00000238280', 'score': 556.64}, {'connected_gene': 'ZNF365', 'score': 4.18}]
chr10 GH10I062652 62652497 62653656 1.23 [{'connected_gene': 'ADO', 'score': 11.25}, {'connected_gene': 'ENSG00000238280', 'score': 11.25}, {'connected_gene': 'EGR2', 'score': 4.03}, {'connected_gene': 'NRBF2', 'score': 1.58}, {'connected_gene': 'LOC105378327', 'score': 0.77}, {'connected_gene': 'GC10M062430', 'score': 0.08}, {'connected_gene': 'ZNF365', 'score': 0.06}]
chr10 GH10I062865 62865432 62867927 0.2 [{'connected_gene': 'ADO', 'score': 14.9}, {'connected_gene': 'EGR2', 'score': 11.23}, {'connected_gene': 'ENSG00000238280', 'score': 10.29}, {'connected_gene': 'GC10P062845', 'score': 0.34}]
chr10 GH10I062852 62852952 62854350 0.91 [{'connected_gene': 'ADO', 'score': 5.2}, {'connected_gene': 'GC10P062845', 'score': 0.44}, {'connected_gene': 'EGR2', 'score': 0.2}]
chr10 GH10I062915 62915833 62916937 0.69 [{'connected_gene': 'ADO', 'score': 7.57}, {'connected_gene': 'EGR2', 'score': 0.77}, {'connected_gene': 'GC10P062845', 'score': 0.19}]
chr10 GH10I062924 62924275 62925190 0.58 [{'connected_gene': 'ADO', 'score': 7.29}, {'connected_gene': 'EGR2', 'score': 0.77}, {'connected_gene': 'GC10P062931', 'score': 0.44}]
chr10 GH10I062611 62611584 62611693 0.24 [{'connected_gene': 'ADO', 'score': 11.21}, {'connected_gene': 'ENSG00000238280', 'score': 11.21}, {'connected_gene': 'RNU6-543P', 'score': 10.46}, {'connected_gene': 'EGR2', 'score': 5.29}, {'connected_gene': 'LOC105378327', 'score': 0.26}, {'connected_gene': 'GC10M062430', 'score': 0.1}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062610 62610762 62610931 0.72 [{'connected_gene': 'ADO', 'score': 11.21}, {'connected_gene': 'ENSG00000238280', 'score': 11.21}, {'connected_gene': 'RNU6-543P', 'score': 10.46}, {'connected_gene': 'LOC105378327', 'score': 0.26}, {'connected_gene': 'GC10M062430', 'score': 0.1}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062694 62694461 62695186 0.31 [{'connected_gene': 'ADO', 'score': 15.4}, {'connected_gene': 'ENSG00000238280', 'score': 10.77}, {'connected_gene': 'LOC105378327', 'score': 0.28}, {'connected_gene': 'ALDH7A1P4', 'score': 0.25}]
chr10 GH10I062690 62690802 62692175 0.69 [{'connected_gene': 'ADO', 'score': 22.58}, {'connected_gene': 'ENSG00000238280', 'score': 10.78}, {'connected_gene': 'LOC105378327', 'score': 0.28}, {'connected_gene': 'ALDH7A1P4', 'score': 0.25}]
chr10 GH10I062685 62685569 62685884 0.22 [{'connected_gene': 'ADO', 'score': 16.81}, {'connected_gene': 'ENSG00000238280', 'score': 10.77}, {'connected_gene': 'LOC105378327', 'score': 0.29}, {'connected_gene': 'ALDH7A1P4', 'score': 0.22}]
chr10 GH10I062643 62643302 62644929 0.2 [{'connected_gene': 'ADO', 'score': 19.27}, {'connected_gene': 'ENSG00000238280', 'score': 11.02}, {'connected_gene': 'LOC105378327', 'score': 0.39}, {'connected_gene': 'GC10M062430', 'score': 0.08}, {'connected_gene': 'ZNF365', 'score': 0.06}]
chr10 GH10I062587 62587101 62588012 0.31 [{'connected_gene': 'ADO', 'score': 10.22}, {'connected_gene': 'ENSG00000238280', 'score': 10.22}, {'connected_gene': 'LOC105378327', 'score': 0.2}, {'connected_gene': 'GC10M062430', 'score': 0.1}, {'connected_gene': 'ZNF365', 'score': 0.08}]
chr10 GH10I062639 62639261 62639410 0.51 [{'connected_gene': 'ADO', 'score': 11.19}, {'connected_gene': 'ENSG00000238280', 'score': 11.19}, {'connected_gene': 'LOC105378327', 'score': 0.37}, {'connected_gene': 'GC10M062430', 'score': 0.08}, {'connected_gene': 'ZNF365', 'score': 0.06}]
chr10 GH10I063000 63000966 63003270 0.38 [{'connected_gene': 'ADO', 'score': 9.97}, {'connected_gene': 'ENSG00000238280', 'score': 9.97}, {'connected_gene': 'LOC105378325', 'score': 4.58}, {'connected_gene': 'PIR50053', 'score': 0.22}, {'connected_gene': 'GC10P062931', 'score': 0.19}]
chr10 GH10I062970 62970622 62973341 0.31 [{'connected_gene': 'ADO', 'score': 6.55}, {'connected_gene': 'GC10P062931', 'score': 0.26}, {'connected_gene': 'PIR50053', 'score': 0.17}]
chr10 GH10I062994 62994981 62996479 0.76 [{'connected_gene': 'ADO', 'score': 6.46}, {'connected_gene': 'PIR50053', 'score': 0.21}, {'connected_gene': 'GC10P062931', 'score': 0.21}]
chr10 GH10I062808 62808401 62809000 0.31 [{'connected_gene': 'ADO', 'score': 0.77}, {'connected_gene': 'ENSG00000238280', 'score': 0.77}, {'connected_gene': 'GC10P062845', 'score': 0.28}]
chr10 GH10I062742 62742401 62742973 1.08 [{'connected_gene': 'ALDH7A1P4', 'score': 550.77}, {'connected_gene': 'EGR2', 'score': 32.24}, {'connected_gene': 'ADO', 'score': 23.83}, {'connected_gene': 'ENSG00000238280', 'score': 11.06}, {'connected_gene': 'NRBF2', 'score': 3.22}, {'connected_gene': 'GC10P062785', 'score': 0.26}]
chr10 GH10I062869 62869044 62871873 0.74 [{'connected_gene': 'JMJD1C', 'score': 48.83}, {'connected_gene': 'ADO', 'score': 15.8}, {'connected_gene': 'EGR2', 'score': 11.36}, {'connected_gene': 'ENSG00000238280', 'score': 10.36}, {'connected_gene': 'GC10P062845', 'score': 0.31}]
chr10 GH10I062732 62732581 62734256 1.3 [{'connected_gene': 'EGR2', 'score': 30.49}, {'connected_gene': 'ADO', 'score': 22.96}, {'connected_gene': 'ENSG00000238280', 'score': 11.66}, {'connected_gene': 'NRBF2', 'score': 2.41}, {'connected_gene': 'ALDH7A1P4', 'score': 0.44}, {'connected_gene': 'LOC105378327', 'score': 0.18}]
chr10 GH10I062708 62708401 62709000 0.94 [{'connected_gene': 'EGR2', 'score': 29.79}, {'connected_gene': 'ADO', 'score': 11.0}, {'connected_gene': 'ENSG00000238280', 'score': 11.0}, {'connected_gene': 'NRBF2', 'score': 2.82}, {'connected_gene': 'ALDH7A1P4', 'score': 0.29}, {'connected_gene': 'LOC105378327', 'score': 0.23}]
chr10 GH10I062710 62710001 62710650 0.68 [{'connected_gene': 'EGR2', 'score': 36.62}, {'connected_gene': 'ADO', 'score': 11.01}, {'connected_gene': 'ENSG00000238280', 'score': 11.0}, {'connected_gene': 'NRBF2', 'score': 3.04}, {'connected_gene': 'ALDH7A1P4', 'score': 0.29}, {'connected_gene': 'LOC105378327', 'score': 0.23}]
chr10 GH10I062735 62735804 62736174 1.04 [{'connected_gene': 'EGR2', 'score': 38.81}, {'connected_gene': 'ADO', 'score': 11.37}, {'connected_gene': 'ENSG00000238280', 'score': 11.37}, {'connected_gene': 'NRBF2', 'score': 3.47}, {'connected_gene': 'ALDH7A1P4', 'score': 0.44}, {'connected_gene': 'LOC105378327', 'score': 0.18}]
chr10 GH10I062728 62728668 62728826 0.42 [{'connected_gene': 'EGR2', 'score': 25.92}, {'connected_gene': 'ADO', 'score': 11.16}, {'connected_gene': 'ENSG00000238280', 'score': 11.16}, {'connected_gene': 'NRBF2', 'score': 2.77}, {'connected_gene': 'ALDH7A1P4', 'score': 0.39}, {'connected_gene': 'LOC105378327', 'score': 0.19}]
chr10 GH10I062759 62759696 62761599 1.13 [{'connected_gene': 'EGR2', 'score': 26.96}, {'connected_gene': 'ADO', 'score': 24.63}, {'connected_gene': 'ENSG00000238280', 'score': 11.59}, {'connected_gene': 'NRBF2', 'score': 2.21}, {'connected_gene': 'ALDH7A1P4', 'score': 0.37}, {'connected_gene': 'GC10P062785', 'score': 0.31}]
chr10 GH10I062744 62744269 62744455 0.43 [{'connected_gene': 'EGR2', 'score': 36.63}, {'connected_gene': 'ADO', 'score': 23.45}, {'connected_gene': 'ENSG00000238280', 'score': 11.06}, {'connected_gene': 'NRBF2', 'score': 3.04}, {'connected_gene': 'ALDH7A1P4', 'score': 0.77}, {'connected_gene': 'GC10P062785', 'score': 0.26}]
chr10 GH10I062745 62745562 62745931 0.3 [{'connected_gene': 'EGR2', 'score': 28.89}, {'connected_gene': 'ADO', 'score': 23.82}, {'connected_gene': 'ENSG00000238280', 'score': 11.06}, {'connected_gene': 'NRBF2', 'score': 2.54}, {'connected_gene': 'ALDH7A1P4', 'score': 0.77}, {'connected_gene': 'GC10P062785', 'score': 0.26}]
chr10 GH10I062680 62680862 62681909 1.32 [{'connected_gene': 'EGR2', 'score': 34.46}, {'connected_gene': 'ADO', 'score': 7.76}, {'connected_gene': 'NRBF2', 'score': 3.56}, {'connected_gene': 'LOC105378327', 'score': 0.31}, {'connected_gene': 'ALDH7A1P4', 'score': 0.21}]
chr10 GH10I062687 62687474 62687613 0.58 [{'connected_gene': 'EGR2', 'score': 31.92}, {'connected_gene': 'ADO', 'score': 10.77}, {'connected_gene': 'ENSG00000238280', 'score': 10.77}, {'connected_gene': 'NRBF2', 'score': 3.09}, {'connected_gene': 'LOC105378327', 'score': 0.29}, {'connected_gene': 'ALDH7A1P4', 'score': 0.23}]
chr10 GH10I062689 62689115 62690599 0.95 [{'connected_gene': 'EGR2', 'score': 28.49}, {'connected_gene': 'ADO', 'score': 15.41}, {'connected_gene': 'ENSG00000238280', 'score': 14.97}, {'connected_gene': 'NRBF2', 'score': 3.58}, {'connected_gene': 'LOC105378327', 'score': 0.29}, {'connected_gene': 'ALDH7A1P4', 'score': 0.23}]
chr10 GH10I062640 62640400 62640800 1.11 [{'connected_gene': 'EGR2', 'score': 25.04}, {'connected_gene': 'ENSG00000238280', 'score': 11.19}, {'connected_gene': 'ADO', 'score': 11.19}, {'connected_gene': 'NRBF2', 'score': 3.3}, {'connected_gene': 'LOC105378327', 'score': 0.39}, {'connected_gene': 'GC10M062430', 'score': 0.08}, {'connected_gene': 'ZNF365', 'score': 0.06}]
chr10 GH10I062635 62635168 62639199 1.51 [{'connected_gene': 'EGR2', 'score': 32.36}, {'connected_gene': 'ADO', 'score': 18.92}, {'connected_gene': 'ENSG00000238280', 'score': 11.19}, {'connected_gene': 'NRBF2', 'score': 4.01}, {'connected_gene': 'LOC105378327', 'score': 0.37}, {'connected_gene': 'GC10M062430', 'score': 0.08}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062778 62778720 62780063 1.19 [{'connected_gene': 'EGR2', 'score': 13.6}, {'connected_gene': 'ADO', 'score': 12.17}, {'connected_gene': 'ENSG00000238280', 'score': 12.17}, {'connected_gene': 'JMJD1C', 'score': 5.61}, {'connected_gene': 'NRBF2', 'score': 3.22}, {'connected_gene': 'GC10P062785', 'score': 0.44}, {'connected_gene': 'ALDH7A1P4', 'score': 0.28}]
chr10 GH10I062613 62613260 62615540 1.44 [{'connected_gene': 'EGR2', 'score': 32.36}, {'connected_gene': 'ADO', 'score': 12.98}, {'connected_gene': 'ENSG00000238280', 'score': 11.56}, {'connected_gene': 'RNU6-543P', 'score': 10.46}, {'connected_gene': 'LOC105378327', 'score': 0.26}, {'connected_gene': 'GC10M062430', 'score': 0.09}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062616 62616602 62621514 1.4 [{'connected_gene': 'EGR2', 'score': 37.36}, {'connected_gene': 'ADO', 'score': 11.91}, {'connected_gene': 'ENSG00000238280', 'score': 11.91}, {'connected_gene': 'LOC105378327', 'score': 0.28}, {'connected_gene': 'GC10M062430', 'score': 0.09}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062622 62622127 62622302 0.48 [{'connected_gene': 'EGR2', 'score': 28.86}, {'connected_gene': 'ADO', 'score': 12.96}, {'connected_gene': 'ENSG00000238280', 'score': 11.51}, {'connected_gene': 'LOC105378327', 'score': 0.29}, {'connected_gene': 'GC10M062430', 'score': 0.09}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062631 62631360 62633307 1.56 [{'connected_gene': 'EGR2', 'score': 34.12}, {'connected_gene': 'ADO', 'score': 7.49}, {'connected_gene': 'LOC105378327', 'score': 0.34}, {'connected_gene': 'GC10M062430', 'score': 0.08}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062958 62958419 62963477 0.2 [{'connected_gene': 'EGR2', 'score': 11.48}, {'connected_gene': 'ADO', 'score': 6.36}, {'connected_gene': 'ENSG00000238280', 'score': 5.42}, {'connected_gene': 'GC10P062931', 'score': 0.31}, {'connected_gene': 'PIR50053', 'score': 0.15}]
chr10 GH10I062819 62819218 62819277 0.88 [{'connected_gene': 'EGR2', 'score': 550.15}, {'connected_gene': 'ADO', 'score': 8.19}, {'connected_gene': 'ENSG00000238280', 'score': 0.39}, {'connected_gene': 'GC10P062845', 'score': 0.31}]
chr10 GH10I062978 62978047 62982808 0.46 [{'connected_gene': 'EGR2', 'score': 11.04}, {'connected_gene': 'ADO', 'score': 6.37}, {'connected_gene': 'ENSG00000238280', 'score': 5.12}, {'connected_gene': 'GC10P062931', 'score': 0.25}, {'connected_gene': 'PIR50053', 'score': 0.18}]
chr10 GH10I062580 62580593 62586499 1.21 [{'connected_gene': 'EGR2', 'score': 16.05}, {'connected_gene': 'RNU6-543P', 'score': 10.41}, {'connected_gene': 'ADO', 'score': 10.33}, {'connected_gene': 'ENSG00000238280', 'score': 10.33}, {'connected_gene': 'LOC105378327', 'score': 0.19}, {'connected_gene': 'GC10M062430', 'score': 0.11}, {'connected_gene': 'ZNF365', 'score': 0.08}]
chr10 GH10I062883 62883595 62887764 0.49 [{'connected_gene': 'EGR2', 'score': 11.73}, {'connected_gene': 'RNU6-543P', 'score': 10.19}, {'connected_gene': 'ADO', 'score': 8.56}, {'connected_gene': 'ENSG00000238280', 'score': 5.32}, {'connected_gene': 'GC10P062845', 'score': 0.26}]
chr10 GH10I062594 62594122 62594271 0.94 [{'connected_gene': 'RNU6-543P', 'score': 11.14}, {'connected_gene': 'JMJD1C-AS1', 'score': 10.29}, {'connected_gene': 'ADO', 'score': 9.86}, {'connected_gene': 'ENSG00000238280', 'score': 9.86}, {'connected_gene': 'LOC105378327', 'score': 0.21}, {'connected_gene': 'GC10M062430', 'score': 0.1}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062592 62592222 62592622 0.45 [{'connected_gene': 'RNU6-543P', 'score': 11.14}, {'connected_gene': 'ADO', 'score': 10.39}, {'connected_gene': 'ENSG00000238280', 'score': 10.39}, {'connected_gene': 'EGR2', 'score': 7.19}, {'connected_gene': 'LOC105378327', 'score': 0.21}, {'connected_gene': 'GC10M062430', 'score': 0.1}, {'connected_gene': 'ZNF365', 'score': 0.08}]
chr10 GH10I062596 62596812 62597657 0.2 [{'connected_gene': 'RNU6-543P', 'score': 11.43}, {'connected_gene': 'ADO', 'score': 10.9}, {'connected_gene': 'ENSG00000238280', 'score': 10.9}, {'connected_gene': 'LOC105378327', 'score': 0.22}, {'connected_gene': 'GC10M062430', 'score': 0.1}, {'connected_gene': 'ZNF365', 'score': 0.07}]
chr10 GH10I062844 62844343 62844568 0.43 [{'connected_gene': 'GC10P062845', 'score': 550.77}, {'connected_gene': 'ADO', 'score': 10.3}, {'connected_gene': 'ENSG00000238280', 'score': 10.3}, {'connected_gene': 'EGR2', 'score': 0.18}]
chr10 GH10I062660 62660335 62660569 0.24 [{'connected_gene': 'ENSG00000238280', 'score': 10.9}, {'connected_gene': 'ADO', 'score': 10.9}, {'connected_gene': 'LOC105378327', 'score': 0.77}, {'connected_gene': 'ALDH7A1P4', 'score': 0.18}, {'connected_gene': 'ZNF365', 'score': 0.06}]
chr10 GH10I063003 63003787 63006973 0.62 [{'connected_gene': 'ENSG00000238280', 'score': 9.97}, {'connected_gene': 'ADO', 'score': 9.97}, {'connected_gene': 'LOC105378325', 'score': 4.35}, {'connected_gene': 'PIR50053', 'score': 0.22}, {'connected_gene': 'GC10P062931', 'score': 0.19}]
chr10 GH10I062788 62788952 62789840 0.49 [{'connected_gene': 'GC10P062785', 'score': 0.77}, {'connected_gene': 'ADO', 'score': 0.37}]
chr10 GH10I062794 62794381 62794530 0.31 [{'connected_gene': 'GC10P062785', 'score': 0.44}, {'connected_gene': 'ADO', 'score': 0.39}, {'connected_gene': 'ENSG00000238280', 'score': 0.39}]