PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000360128	[[33342267, 33342739], [33345895, 33345945], [33346037, 33346147], [33346251, 33346316], [33346505, 33346657], [33347802, 33347857], [33353059, 33353134], [33354142, 33354259], [33354749, 33354815], [33355949, 33358778]]	[[33342724, 33342739], [33345895, 33345945], [33346037, 33346147], [33346251, 33346316], [33346505, 33346657], [33347802, 33347857], [33353059, 33353134], [33354142, 33354259], [33354749, 33354815], [33355949, 33356147]]
ENST00000517567	[[33342699, 33342739], [33345895, 33345945], [33346037, 33346530]]	None
ENST00000520763	[[33342699, 33342739], [33345895, 33345945], [33346037, 33346147], [33346251, 33346316], [33346505, 33346809]]	None
ENST00000518389	[[33342717, 33342739], [33345895, 33345945], [33346037, 33346147], [33346251, 33346316], [33346505, 33346657], [33353059, 33353134], [33354142, 33354259], [33354749, 33354815], [33355949, 33356164]]	[[33342717, 33342739], [33345895, 33345945], [33346037, 33346147], [33346251, 33346316], [33346505, 33346657], [33353059, 33353072]]
ENST00000519089	[[33342724, 33343149], [33345895, 33345945], [33346037, 33346120]]	None
NM_032509	[[33342684, 33342739], [33345895, 33345945], [33346037, 33346147], [33346251, 33346316], [33346505, 33346657], [33347802, 33347857], [33353059, 33353134], [33354142, 33354259], [33354749, 33354815], [33355949, 33358778]]	[[33342724, 33342739], [33345895, 33345945], [33346037, 33346147], [33346251, 33346316], [33346505, 33346657], [33347802, 33347857], [33353059, 33353134], [33354142, 33354259], [33354749, 33354815], [33355949, 33356147]]

Promoter

Chrom	Start	End	Description
chr8	33342691	33342716	CAGE_peak_1_at_MAK16_5end
chr8	33356206	33356213	CAGE_peak_2_at_MAK16_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I033574	33574366	33575200	0.8	[{'connected_gene': 'FUT10', 'score': 14.04}, {'connected_gene': 'LOC100630919', 'score': 12.05}, {'connected_gene': 'SNORD13', 'score': 12.03}, {'connected_gene': 'TTI2', 'score': 12.03}, {'connected_gene': 'ENSG00000252505', 'score': 11.86}, {'connected_gene': 'RPL10P18', 'score': 11.86}, {'connected_gene': 'MAK16', 'score': 11.16}, {'connected_gene': 'RNF122', 'score': 4.72}, {'connected_gene': 'RN7SL621P', 'score': 0.44}]
chr8	GH08I033483	33483742	33486497	2.08	[{'connected_gene': 'MAK16', 'score': 550.77}, {'connected_gene': 'FUT10', 'score': 40.7}, {'connected_gene': 'GC08P033513', 'score': 0.31}, {'connected_gene': 'TTI2', 'score': 0.31}]
chr8	GH08I033886	33886000	33886251	0.24	[{'connected_gene': 'MAK16', 'score': 1.37}, {'connected_gene': 'GC08P033912', 'score': 0.31}, {'connected_gene': 'RPL6P22', 'score': 0.31}, {'connected_gene': 'LOC105379364', 'score': 0.06}]
chr8	GH08I033433	33433924	33434275	0.26	[{'connected_gene': 'MAK16', 'score': 12.72}, {'connected_gene': 'ENSG00000252505', 'score': 9.66}, {'connected_gene': 'RPL10P18', 'score': 9.66}, {'connected_gene': 'FUT10', 'score': 3.13}, {'connected_gene': 'TTI2', 'score': 2.76}, {'connected_gene': 'LOC100507379', 'score': 0.77}, {'connected_gene': 'PIR51386', 'score': 0.44}]
chr8	GH08I033207	33207201	33207414	0.39	[{'connected_gene': 'TTI2', 'score': 4.01}, {'connected_gene': 'FUT10', 'score': 3.95}, {'connected_gene': 'MAK16', 'score': 2.72}, {'connected_gene': 'ENSG00000253993', 'score': 0.37}, {'connected_gene': 'GC08P033066', 'score': 0.11}, {'connected_gene': 'GC08M033148', 'score': 0.08}]
chr8	GH08I033511	33511800	33515383	2.15	[{'connected_gene': 'TTI2', 'score': 596.16}, {'connected_gene': 'SNORD13', 'score': 550.77}, {'connected_gene': 'GC08P033513', 'score': 550.77}, {'connected_gene': 'FUT10', 'score': 42.52}, {'connected_gene': 'MAK16', 'score': 30.71}, {'connected_gene': 'RNF122', 'score': 10.29}]
chr8	GH08I033509	33509683	33509827	0.74	[{'connected_gene': 'GC08P033513', 'score': 0.77}, {'connected_gene': 'TTI2', 'score': 0.77}, {'connected_gene': 'MAK16', 'score': 0.31}]
chr8	GH08I033580	33580718	33582316	0.77	[{'connected_gene': 'GC08P033581', 'score': 550.77}, {'connected_gene': 'RN7SL621P', 'score': 550.77}, {'connected_gene': 'FUT10', 'score': 12.98}, {'connected_gene': 'LOC100630919', 'score': 12.01}, {'connected_gene': 'SNORD13', 'score': 11.99}, {'connected_gene': 'TTI2', 'score': 11.99}, {'connected_gene': 'ENSG00000252505', 'score': 11.41}, {'connected_gene': 'RPL10P18', 'score': 11.41}, {'connected_gene': 'MAK16', 'score': 10.87}, {'connected_gene': 'RNF122', 'score': 4.6}, {'connected_gene': 'DUSP26', 'score': 0.37}]