PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000265140	[[93954051, 93954470], [93964515, 93964629], [93964796, 93964872], [93966207, 93966448], [93978977, 93979140], [93985158, 93985302], [93987406, 93987550], [93988976, 93989126], [93990334, 93990457], [93998002, 93998056], [93999454, 93999613], [94001565, 94001729], [94005855, 94005984], [94006547, 94006713], [94014512, 94014660], [94022277, 94022423], [94024210, 94024374], [94025177, 94025311], [94027268, 94027361], [94027778, 94027961], [94030535, 94033326]]	[[93964515, 93964629], [93964796, 93964872], [93966207, 93966448], [93978977, 93979140], [93985158, 93985302], [93987406, 93987550], [93988976, 93989126], [93990334, 93990457], [93998002, 93998056], [93999454, 93999613], [94001565, 94001729], [94005855, 94005984], [94006547, 94006713], [94014512, 94014660], [94022277, 94022423], [94024210, 94024374], [94025177, 94025311], [94027268, 94027361], [94027778, 94027961], [94030535, 94031017]]
ENST00000508130	[[93954382, 93954470], [93964515, 93964629], [93964796, 93964872], [93966207, 93966448], [93985158, 93985302], [93987406, 93987550], [93988976, 93989126], [93990334, 93990456]]	[[93964515, 93964629], [93964796, 93964872], [93966207, 93966448], [93985158, 93985267]]
ENST00000466957	[[93964586, 93964629], [93964796, 93964872], [93966207, 93966448], [93998002, 93998056], [93999454, 93999613], [94001611, 94001631]]	[[93964586, 93964629], [93964796, 93964872], [93966207, 93966448], [93998002, 93998030]]
ENST00000508383	[[93954389, 93954470], [93964515, 93964629], [93964796, 93964872], [93965368, 93965425]]	None
ENST00000504099	[[93954391, 93954470], [93955769, 93955876], [93964515, 93964629], [93964796, 93964872], [93966207, 93966409]]	[[93964515, 93964629], [93964796, 93964872], [93966207, 93966409]]
ENST00000450932	[[94014103, 94014660], [94022277, 94022423], [94024210, 94024374], [94025177, 94025311], [94027268, 94027361], [94027778, 94027961], [94030535, 94031576]]	None
ENST00000475916	[[94026899, 94027361], [94027778, 94027885]]	None
ENST00000493934	[[94027890, 94027961], [94043929, 94043994], [94074868, 94075141]]	None
NM_032290	[[93954390, 93954470], [93964515, 93964629], [93964796, 93964872], [93966207, 93966448], [93978977, 93979140], [93985158, 93985302], [93987406, 93987550], [93988976, 93989126], [93990334, 93990457], [93998002, 93998056], [93999454, 93999613], [94001565, 94001729], [94005855, 94005984], [94006547, 94006713], [94014512, 94014660], [94022277, 94022423], [94024210, 94024374], [94025177, 94025311], [94027268, 94027361], [94027778, 94027961], [94030535, 94031573]]	[[93964515, 93964629], [93964796, 93964872], [93966207, 93966448], [93978977, 93979140], [93985158, 93985302], [93987406, 93987550], [93988976, 93989126], [93990334, 93990457], [93998002, 93998056], [93999454, 93999613], [94001565, 94001729], [94005855, 94005984], [94006547, 94006713], [94014512, 94014660], [94022277, 94022423], [94024210, 94024374], [94025177, 94025311], [94027268, 94027361], [94027778, 94027961], [94030535, 94031017]]

Promoter

Chrom	Start	End	Description
chr5	93953918	93953955	CAGE_peak_4_at_ANKRD32_5end
chr5	93953956	93953975	CAGE_peak_5_at_ANKRD32_5end
chr5	93953985	93954006	CAGE_peak_6_at_ANKRD32_5end
chr5	93954039	93954052	CAGE_peak_8_at_ANKRD32_5end
chr5	93954358	93954406	CAGE_peak_1_at_ANKRD32_5end
chr5	93954410	93954423	CAGE_peak_3_at_ANKRD32_5end
chr5	94027855	94027904	CAGE_peak_2_at_ANKRD32_5end
chr5	94027924	94027935	CAGE_peak_7_at_ANKRD32_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I094518	94518290	94518346	0.44	[{'connected_gene': 'SLF1', 'score': 12.79}, {'connected_gene': 'KIAA0825', 'score': 11.0}, {'connected_gene': 'MTND5P12', 'score': 0.25}, {'connected_gene': 'GC05P094313', 'score': 0.08}]
chr5	GH05I094562	94562375	94562662	0.72	[{'connected_gene': 'SLF1', 'score': 10.45}, {'connected_gene': 'KIAA0825', 'score': 10.44}, {'connected_gene': 'MTND5P12', 'score': 0.77}, {'connected_gene': 'GC05P094313', 'score': 0.07}]
chr5	GH05I094698	94698131	94698700	0.76	[{'connected_gene': 'SLF1', 'score': 13.77}, {'connected_gene': 'KIAA0825', 'score': 12.46}, {'connected_gene': 'GC05P094754', 'score': 0.22}]
chr5	GH05I094713	94713827	94714051	0.22	[{'connected_gene': 'KIAA0825', 'score': 1.65}, {'connected_gene': 'GC05P094754', 'score': 0.26}, {'connected_gene': 'SLF1', 'score': 0.15}, {'connected_gene': 'MCTP1', 'score': 0.03}]
chr5	GH05I094716	94716391	94716769	0.26	[{'connected_gene': 'KIAA0825', 'score': 1.63}, {'connected_gene': 'GC05P094754', 'score': 0.28}, {'connected_gene': 'SLF1', 'score': 0.15}, {'connected_gene': 'MCTP1', 'score': 0.03}]
chr5	GH05I094616	94616601	94620252	2.24	[{'connected_gene': 'KIAA0825', 'score': 557.4}, {'connected_gene': 'SLF1', 'score': 550.77}, {'connected_gene': 'ENSG00000270133', 'score': 550.77}, {'connected_gene': 'RPL7P18', 'score': 6.3}]
chr5	GH05I094693	94693456	94693669	0.75	[{'connected_gene': 'KIAA0825', 'score': 11.23}, {'connected_gene': 'SLF1', 'score': 11.22}, {'connected_gene': 'GC05P094754', 'score': 0.21}]
chr5	GH05I094703	94703063	94703331	0.63	[{'connected_gene': 'KIAA0825', 'score': 10.65}, {'connected_gene': 'SLF1', 'score': 10.65}, {'connected_gene': 'GC05P094754', 'score': 0.23}]
chr5	GH05I094569	94569200	94569601	0.2	[{'connected_gene': 'MTND6P3', 'score': 550.77}, {'connected_gene': 'MTCYBP35', 'score': 550.77}, {'connected_gene': 'MTND5P12', 'score': 550.77}, {'connected_gene': 'SLF1', 'score': 10.73}, {'connected_gene': 'KIAA0825', 'score': 10.73}, {'connected_gene': 'RPL7P18', 'score': 6.16}]
chr5	GH05I094595	94595201	94595600	0.31	[{'connected_gene': 'GC05P094593', 'score': 0.77}, {'connected_gene': 'SLF1', 'score': 0.34}, {'connected_gene': 'KIAA0825', 'score': 0.34}]
chr5	GH05I094737	94737996	94738145	0.66	[{'connected_gene': 'GC05P094754', 'score': 0.37}, {'connected_gene': 'KIAA0825', 'score': 0.13}, {'connected_gene': 'SLF1', 'score': 0.13}, {'connected_gene': 'MCTP1', 'score': 0.03}]