Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000400301 [[22004790, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109688]] [[22005909, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109450]]
ENST00000308271 [[22005071, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22021558, 22021714], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22110099]] [[22005909, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22021558, 22021714], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109450]]
ENST00000374732 [[22005395, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047656], [22048142, 22048257], [22050390, 22051612]] [[22005909, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047656], [22048142, 22048257], [22050390, 22050655]]
ENST00000529637 [[22005859, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22021558, 22021714], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033400], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056322], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109484]] [[22005909, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22021558, 22021714], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033400], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056322], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109450]]
ENST00000464577 [[22012384, 22013732], [22016466, 22016592], [22021558, 22021714], [22027990, 22028095], [22030754, 22031108]] None
ENST00000479177 [[22005691, 22005932], [22007300, 22007745]] None
ENST00000471752 [[22041616, 22041950], [22047528, 22047639]] None
ENST00000487880 [[22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22052983, 22053063]] None
ENST00000526044 [[22050390, 22050588], [22055062, 22055212], [22056196, 22056322], [22059254, 22059329]] [[22050390, 22050588], [22055062, 22055212], [22056196, 22056254]]
ENST00000534705 [[22050464, 22050588], [22055062, 22055212], [22056196, 22056325], [22059156, 22059319]] [[22050464, 22050588], [22055062, 22055212], [22056196, 22056325], [22059156, 22059193]]
ENST00000421625 [[22054343, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22110099]] [[22055054, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109450]]
ENST00000374730 [[22055104, 22055212], [22056196, 22056325], [22062922, 22063118], [22073559, 22073642], [22074630, 22074684]] [[22056312, 22056325], [22062922, 22063118], [22073559, 22073642], [22074630, 22074684]]
ENST00000527823 [[22079499, 22079612], [22083038, 22083195], [22084155, 22084276], [22108350, 22108513]] [[22079499, 22079612], [22083038, 22083069]]
ENST00000532737 [[22079527, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109384], [22109470, 22109719]] [[22079527, 22079612], [22083038, 22083069]]
ENST00000489108 [[22083953, 22084276], [22109316, 22109436]] None
NM_032236 [[22005083, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22021558, 22021714], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109688]] [[22005909, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22021558, 22021714], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109450]]
NM_001330394 [[22005083, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109688]] [[22005909, 22005932], [22007300, 22007327], [22013683, 22013732], [22016466, 22016592], [22027990, 22028095], [22030004, 22030111], [22030754, 22030885], [22032219, 22032330], [22032618, 22032680], [22032959, 22033082], [22033236, 22033361], [22041881, 22041950], [22047528, 22047659], [22048142, 22048257], [22050390, 22050588], [22055062, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109450]]
NM_001032730 [[22054338, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109688]] [[22055054, 22055212], [22056196, 22056325], [22062938, 22063118], [22073559, 22073642], [22074630, 22074764], [22077999, 22078108], [22079019, 22079144], [22079484, 22079612], [22083038, 22083195], [22084155, 22084276], [22109316, 22109450]]
Promoter
Chrom Start End Description
chr1 22109425 22109430 CAGE_peak_19_at_USP48_5end
chr1 22109517 22109528 CAGE_peak_6_at_USP48_5end
chr1 22109531 22109558 CAGE_peak_5_at_USP48_5end
chr1 22109560 22109606 CAGE_peak_2_at_USP48_5end
chr1 22109611 22109624 CAGE_peak_4_at_USP48_5end
chr1 22109626 22109674 CAGE_peak_1_at_USP48_5end
chr1 22109682 22109706 CAGE_peak_3_at_USP48_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr1 GH01I022051 22051743 22054871 2.3 [{'connected_gene': 'CDC42', 'score': 556.91}, {'connected_gene': 'LOC105376841', 'score': 550.77}, {'connected_gene': 'LINC00339', 'score': 45.28}, {'connected_gene': 'ZBTB40', 'score': 26.92}, {'connected_gene': 'KDM1A', 'score': 26.25}, {'connected_gene': 'CDC42-IT1', 'score': 25.91}, {'connected_gene': 'NBPF3', 'score': 24.1}, {'connected_gene': 'USP48', 'score': 20.91}, {'connected_gene': 'NBPF2P', 'score': 19.83}, {'connected_gene': 'ENSG00000271428', 'score': 11.5}, {'connected_gene': 'LINC01635', 'score': 4.74}]
chr1 GH01I021916 21916725 21917617 1.15 [{'connected_gene': 'ZBTB40', 'score': 40.68}, {'connected_gene': 'USP48', 'score': 35.61}, {'connected_gene': 'CDC42-IT1', 'score': 25.21}, {'connected_gene': 'NBPF3', 'score': 23.88}, {'connected_gene': 'ENSG00000271428', 'score': 22.25}, {'connected_gene': 'NBPF2P', 'score': 22.05}, {'connected_gene': 'RPL21P29', 'score': 0.44}, {'connected_gene': 'GC01P021930', 'score': 0.39}, {'connected_gene': 'HSPG2', 'score': 0.34}]
chr1 GH01I021630 21630134 21635751 1.43 [{'connected_gene': 'ZBTB40', 'score': 27.43}, {'connected_gene': 'RAP1GAP', 'score': 25.71}, {'connected_gene': 'HP1BP3', 'score': 25.68}, {'connected_gene': 'USP48', 'score': 20.85}, {'connected_gene': 'CDC42-IT1', 'score': 14.02}, {'connected_gene': 'LOC105376834', 'score': 12.52}, {'connected_gene': 'ENSG00000271428', 'score': 11.18}, {'connected_gene': 'DDOST', 'score': 9.79}, {'connected_gene': 'HS6ST1P1', 'score': 4.57}, {'connected_gene': 'PIR35545', 'score': 0.29}]
chr1 GH01I021671 21671524 21672903 0.54 [{'connected_gene': 'ZBTB40', 'score': 13.93}, {'connected_gene': 'HP1BP3', 'score': 12.71}, {'connected_gene': 'CDC42-IT1', 'score': 10.85}, {'connected_gene': 'USP48', 'score': 10.42}, {'connected_gene': 'HSPG2', 'score': 10.37}, {'connected_gene': 'NBPF3', 'score': 5.0}, {'connected_gene': 'RAP1GAP', 'score': 0.77}, {'connected_gene': 'GC01P021743', 'score': 0.2}]
chr1 GH01I021658 21658992 21660000 1.48 [{'connected_gene': 'ZBTB40', 'score': 15.75}, {'connected_gene': 'HP1BP3', 'score': 14.66}, {'connected_gene': 'CDC42-IT1', 'score': 14.03}, {'connected_gene': 'USP48', 'score': 12.16}, {'connected_gene': 'ALPL', 'score': 11.52}, {'connected_gene': 'ENSG00000271428', 'score': 11.18}, {'connected_gene': 'DDOST', 'score': 9.79}, {'connected_gene': 'RAP1GAP', 'score': 0.44}, {'connected_gene': 'PIR35545', 'score': 0.22}]
chr1 GH01I021610 21610867 21616791 1.09 [{'connected_gene': 'ZBTB40', 'score': 15.75}, {'connected_gene': 'HP1BP3', 'score': 14.65}, {'connected_gene': 'CDC42-IT1', 'score': 14.03}, {'connected_gene': 'RAP1GAP', 'score': 12.69}, {'connected_gene': 'USP48', 'score': 12.14}, {'connected_gene': 'ENSG00000271428', 'score': 11.18}, {'connected_gene': 'DDOST', 'score': 9.79}, {'connected_gene': 'PIR35545', 'score': 0.39}]
chr1 GH01I021893 21893993 21916595 1.73 [{'connected_gene': 'ZBTB40', 'score': 37.88}, {'connected_gene': 'HSPG2', 'score': 29.93}, {'connected_gene': 'LDLRAD2', 'score': 19.95}, {'connected_gene': 'CDC42-IT1', 'score': 10.9}, {'connected_gene': 'USP48', 'score': 10.83}, {'connected_gene': 'EPHB2', 'score': 4.85}, {'connected_gene': 'RPL21P29', 'score': 0.77}, {'connected_gene': 'GC01M021883', 'score': 0.37}]
chr1 GH01I022450 22450179 22453483 2.13 [{'connected_gene': 'ZBTB40', 'score': 573.21}, {'connected_gene': 'PIR59957', 'score': 550.77}, {'connected_gene': 'KDM1A', 'score': 14.07}, {'connected_gene': 'CDC42-IT1', 'score': 11.45}, {'connected_gene': 'ENSG00000271428', 'score': 10.68}, {'connected_gene': 'WNT4', 'score': 10.13}, {'connected_gene': 'USP48', 'score': 10.0}]
chr16 GH16I023420 23420390 23420936 0.64 [{'connected_gene': 'COG7', 'score': 1.58}, {'connected_gene': 'USP31', 'score': 1.43}, {'connected_gene': 'GC16M023413', 'score': 0.44}, {'connected_gene': 'GC16M023430', 'score': 0.37}]
chr1 GH01I021173 21173821 21177659 2.06 [{'connected_gene': 'EIF4G3', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 20.87}, {'connected_gene': 'HP1BP3', 'score': 20.84}, {'connected_gene': 'HSPE1P27', 'score': 0.39}]
chr1 GH01I021865 21865393 21867038 0.87 [{'connected_gene': 'USP48', 'score': 33.86}, {'connected_gene': 'ZBTB40', 'score': 15.75}, {'connected_gene': 'CDC42-IT1', 'score': 14.06}, {'connected_gene': 'LDLRAD2', 'score': 13.02}, {'connected_gene': 'HSPG2', 'score': 12.99}, {'connected_gene': 'ENSG00000271428', 'score': 11.21}, {'connected_gene': 'GC01M021883', 'score': 0.37}, {'connected_gene': 'GC01P021842', 'score': 0.34}]
chr1 GH01I021686 21686323 21688766 0.95 [{'connected_gene': 'USP48', 'score': 30.51}, {'connected_gene': 'RAP1GAP', 'score': 25.54}, {'connected_gene': 'ZBTB40', 'score': 13.9}, {'connected_gene': 'CDC42-IT1', 'score': 11.46}, {'connected_gene': 'NBPF3', 'score': 11.38}, {'connected_gene': 'HSPG2', 'score': 11.05}, {'connected_gene': 'ENSG00000271428', 'score': 10.68}, {'connected_gene': 'HP1BP3', 'score': 9.67}, {'connected_gene': 'GC01P021743', 'score': 0.23}]
chr1 GH01I021618 21618756 21619905 0.85 [{'connected_gene': 'USP48', 'score': 4.54}, {'connected_gene': 'PIR35545', 'score': 0.37}, {'connected_gene': 'RAP1GAP', 'score': 0.23}]
chr1 GH01I021775 21775200 21776337 1.1 [{'connected_gene': 'USP48', 'score': 45.45}, {'connected_gene': 'HP1BP3', 'score': 20.64}, {'connected_gene': 'ZBTB40', 'score': 18.86}, {'connected_gene': 'CDC42-IT1', 'score': 15.01}, {'connected_gene': 'ENSG00000271428', 'score': 12.97}, {'connected_gene': 'ENSG00000231978', 'score': 0.44}]
chr1 GH01I021748 21748936 21750735 0.93 [{'connected_gene': 'USP48', 'score': 47.7}, {'connected_gene': 'LDLRAD2', 'score': 12.28}, {'connected_gene': 'HSPG2', 'score': 12.15}, {'connected_gene': 'GC01P021743', 'score': 0.44}, {'connected_gene': 'ENSG00000231978', 'score': 0.37}]
chr1 GH01I021794 21794430 21795039 0.46 [{'connected_gene': 'USP48', 'score': 10.45}, {'connected_gene': 'GC01P021790', 'score': 0.77}, {'connected_gene': 'LDLRAD2', 'score': 0.37}]
chr1 GH01I021603 21603321 21605042 0.63 [{'connected_gene': 'USP48', 'score': 12.94}, {'connected_gene': 'NBPF2P', 'score': 9.74}, {'connected_gene': 'PIR35545', 'score': 0.77}, {'connected_gene': 'RAP1GAP', 'score': 0.2}]
chr1 GH01I021673 21673001 21674000 1.14 [{'connected_gene': 'USP48', 'score': 10.42}, {'connected_gene': 'HSPG2', 'score': 10.37}, {'connected_gene': 'NBPF3', 'score': 5.96}, {'connected_gene': 'RAP1GAP', 'score': 0.77}, {'connected_gene': 'GC01P021743', 'score': 0.2}]
chr1 GH01I021706 21706055 21706880 0.87 [{'connected_gene': 'USP48', 'score': 16.08}, {'connected_gene': 'HSPG2', 'score': 10.92}, {'connected_gene': 'GC01P021743', 'score': 0.29}, {'connected_gene': 'RAP1GAP', 'score': 0.28}]
chr1 GH01I021707 21707228 21707336 0.31 [{'connected_gene': 'USP48', 'score': 11.24}, {'connected_gene': 'HSPG2', 'score': 10.92}, {'connected_gene': 'GC01P021743', 'score': 0.29}, {'connected_gene': 'RAP1GAP', 'score': 0.28}]
chr1 GH01I021675 21675802 21676860 1.15 [{'connected_gene': 'USP48', 'score': 10.43}, {'connected_gene': 'HSPG2', 'score': 10.37}, {'connected_gene': 'RAP1GAP', 'score': 0.44}, {'connected_gene': 'GC01P021743', 'score': 0.21}]
chr1 GH01I021598 21598112 21598930 0.56 [{'connected_gene': 'USP48', 'score': 5.15}, {'connected_gene': 'PIR35545', 'score': 0.77}, {'connected_gene': 'LOC105376834', 'score': 0.39}, {'connected_gene': 'RAP1GAP', 'score': 0.19}]
chr1 GH01I021779 21779443 21785625 2.33 [{'connected_gene': 'USP48', 'score': 585.96}, {'connected_gene': 'CDC42-IT1', 'score': 40.19}, {'connected_gene': 'ZBTB40', 'score': 36.84}, {'connected_gene': 'ENSG00000271428', 'score': 20.03}, {'connected_gene': 'HP1BP3', 'score': 17.9}, {'connected_gene': 'NBPF3', 'score': 11.36}, {'connected_gene': 'CDC42', 'score': 11.07}, {'connected_gene': 'EIF4G3', 'score': 10.6}, {'connected_gene': 'ZBTB40-IT1', 'score': 9.69}, {'connected_gene': 'RAP1GAP', 'score': 4.7}, {'connected_gene': 'ENSG00000231978', 'score': 0.39}]
chr16 GH16I023141 23141280 23150201 2.49 [{'connected_gene': 'USP31', 'score': 570.75}, {'connected_gene': 'NPIPB5', 'score': 14.64}, {'connected_gene': 'COG7', 'score': 13.65}, {'connected_gene': 'PALB2', 'score': 12.74}, {'connected_gene': 'SMG1P1', 'score': 12.62}, {'connected_gene': 'ENSG00000260635', 'score': 12.61}, {'connected_gene': 'ENSG00000260751', 'score': 12.61}, {'connected_gene': 'POLR3E', 'score': 12.02}, {'connected_gene': 'SCNN1G', 'score': 11.29}, {'connected_gene': 'ENSG00000260905', 'score': 10.06}, {'connected_gene': 'ENSG00000260482', 'score': 5.37}, {'connected_gene': 'PIR56769', 'score': 0.29}]
chr16 GH16I023119 23119220 23121922 0.92 [{'connected_gene': 'USP31', 'score': 20.32}, {'connected_gene': 'PIR56769', 'score': 0.44}, {'connected_gene': 'GC16P023106', 'score': 0.39}]
chr1 GH01I021753 21753968 21755359 0.38 [{'connected_gene': 'USP48', 'score': 23.85}, {'connected_gene': 'ENSG00000231978', 'score': 0.39}, {'connected_gene': 'GC01P021743', 'score': 0.39}]
chr16 GH16I023130 23130805 23134657 1.26 [{'connected_gene': 'USP31', 'score': 10.12}, {'connected_gene': 'ENSG00000261090', 'score': 6.97}, {'connected_gene': 'ENSG00000260482', 'score': 5.37}, {'connected_gene': 'PIR56769', 'score': 0.37}]
chr16 GH16I023079 23079900 23082753 0.7 [{'connected_gene': 'USP31', 'score': 19.91}, {'connected_gene': 'GC16M023077', 'score': 0.77}, {'connected_gene': 'ENSG00000260566', 'score': 0.37}]
chr16 GH16I023122 23122905 23123550 0.31 [{'connected_gene': 'USP31', 'score': 19.16}, {'connected_gene': 'PIR56769', 'score': 0.44}, {'connected_gene': 'GC16P023106', 'score': 0.37}]
chr16 GH16I023103 23103879 23105074 0.9 [{'connected_gene': 'USP31', 'score': 20.27}, {'connected_gene': 'GC16P023106', 'score': 0.77}, {'connected_gene': 'GC16M023077', 'score': 0.34}]
chr16 GH16I023070 23070799 23073973 0.72 [{'connected_gene': 'USP31', 'score': 19.48}, {'connected_gene': 'ENSG00000260566', 'score': 0.44}, {'connected_gene': 'GC16M023077', 'score': 0.39}]
chr16 GH16I023123 23123599 23125745 1.04 [{'connected_gene': 'USP31', 'score': 19.86}, {'connected_gene': 'PIR56769', 'score': 0.44}, {'connected_gene': 'GC16P023106', 'score': 0.37}]
chr1 GH01I021760 21760222 21766871 1.31 [{'connected_gene': 'USP48', 'score': 41.83}, {'connected_gene': 'ENSG00000231978', 'score': 0.77}, {'connected_gene': 'GC01P021743', 'score': 0.34}]
chr16 GH16I023058 23058659 23058876 0.24 [{'connected_gene': 'USP31', 'score': 3.38}, {'connected_gene': 'ENSG00000280400', 'score': 0.77}, {'connected_gene': 'ENSG00000261090', 'score': 0.28}]
chr1 GH01I021776 21776905 21777918 0.57 [{'connected_gene': 'USP48', 'score': 20.87}, {'connected_gene': 'ENSG00000231978', 'score': 0.44}]
chr1 GH01I021771 21771601 21772200 0.51 [{'connected_gene': 'USP48', 'score': 10.94}, {'connected_gene': 'ENSG00000231978', 'score': 0.77}]
chr1 GH01I021773 21773001 21774000 0.63 [{'connected_gene': 'USP48', 'score': 26.24}, {'connected_gene': 'ENSG00000231978', 'score': 0.44}]
chr16 GH16I023182 23182460 23182801 1.89 [{'connected_gene': 'SCNN1G', 'score': 550.77}, {'connected_gene': 'USP31', 'score': 14.33}, {'connected_gene': 'ENSG00000260751', 'score': 11.17}, {'connected_gene': 'MFSD13B', 'score': 10.05}, {'connected_gene': 'PALB2', 'score': 10.04}]
chr16 GH16I023279 23279187 23281096 0.81 [{'connected_gene': 'SCNN1B', 'score': 555.92}, {'connected_gene': 'USP31', 'score': 1.44}, {'connected_gene': 'GC16P023276', 'score': 0.77}, {'connected_gene': 'GC16P023275', 'score': 0.77}, {'connected_gene': 'GC16M023275', 'score': 0.29}]
chr1 GH01I021702 21702865 21704397 0.77 [{'connected_gene': 'RAP1GAP', 'score': 17.11}, {'connected_gene': 'USP48', 'score': 11.53}, {'connected_gene': 'GC01P021743', 'score': 0.28}]
chr1 GH01I021622 21622004 21625436 2.13 [{'connected_gene': 'RAP1GAP', 'score': 554.36}, {'connected_gene': 'USP48', 'score': 5.32}, {'connected_gene': 'PIR35545', 'score': 0.34}]
chr1 GH01I021689 21689029 21690069 0.38 [{'connected_gene': 'RAP1GAP', 'score': 16.38}, {'connected_gene': 'USP48', 'score': 15.82}, {'connected_gene': 'GC01P021743', 'score': 0.23}]
chr1 GH01I021668 21667973 21670832 1.94 [{'connected_gene': 'RAP1GAP', 'score': 550.77}, {'connected_gene': 'HP1BP3', 'score': 18.1}, {'connected_gene': 'ZBTB40', 'score': 13.27}, {'connected_gene': 'USP48', 'score': 10.84}, {'connected_gene': 'NBPF3', 'score': 4.99}, {'connected_gene': 'GC01P021743', 'score': 0.19}]
chr1 GH01I021641 21641318 21642892 0.94 [{'connected_gene': 'RAP1GAP', 'score': 24.94}, {'connected_gene': 'HP1BP3', 'score': 22.8}, {'connected_gene': 'LOC105376834', 'score': 12.5}, {'connected_gene': 'NBPF3', 'score': 9.85}, {'connected_gene': 'USP48', 'score': 4.71}, {'connected_gene': 'PIR35545', 'score': 0.26}]
chr1 GH01I021606 21606806 21609736 1.31 [{'connected_gene': 'RAP1GAP', 'score': 11.75}, {'connected_gene': 'LOC105376834', 'score': 5.96}, {'connected_gene': 'USP48', 'score': 5.33}, {'connected_gene': 'PIR35545', 'score': 0.44}]
chr1 GH01I022442 22442419 22445563 0.56 [{'connected_gene': 'WNT4', 'score': 10.13}, {'connected_gene': 'USP48', 'score': 4.45}, {'connected_gene': 'PIR59957', 'score': 0.44}, {'connected_gene': 'ZBTB40', 'score': 0.37}]
chr1 GH01I021259 21259532 21264318 1.73 [{'connected_gene': 'HP1BP3', 'score': 25.95}, {'connected_gene': 'EIF4G3', 'score': 21.75}, {'connected_gene': 'USP48', 'score': 19.02}, {'connected_gene': 'CDC42-IT1', 'score': 11.43}, {'connected_gene': 'NBPF3', 'score': 11.4}, {'connected_gene': 'ENSG00000271428', 'score': 10.65}, {'connected_gene': 'ECE1', 'score': 9.42}, {'connected_gene': 'NBPF2P', 'score': 4.42}, {'connected_gene': 'ALPL', 'score': 1.77}, {'connected_gene': 'ENSG00000236936', 'score': 0.77}, {'connected_gene': 'PIR51422', 'score': 0.28}]
chr1 GH01I021590 21590801 21591000 0.85 [{'connected_gene': 'HP1BP3', 'score': 13.1}, {'connected_gene': 'USP48', 'score': 4.74}, {'connected_gene': 'LOC105376834', 'score': 0.44}, {'connected_gene': 'PIR35545', 'score': 0.39}]
chr1 GH01I021368 21368400 21368801 1.16 [{'connected_gene': 'HP1BP3', 'score': 25.92}, {'connected_gene': 'CDC42-IT1', 'score': 14.0}, {'connected_gene': 'USP48', 'score': 12.08}, {'connected_gene': 'ECE1', 'score': 11.93}, {'connected_gene': 'ENSG00000236936', 'score': 11.8}, {'connected_gene': 'ENSG00000271428', 'score': 11.16}, {'connected_gene': 'DDOST', 'score': 9.79}, {'connected_gene': 'PPP1R11P1', 'score': 0.31}]
chr1 GH01I021861 21861514 21862797 0.77 [{'connected_gene': 'LDLRAD2', 'score': 13.04}, {'connected_gene': 'HSPG2', 'score': 12.98}, {'connected_gene': 'USP48', 'score': 11.45}, {'connected_gene': 'GC01P021842', 'score': 0.34}, {'connected_gene': 'GC01M021883', 'score': 0.34}]
chr1 GH01I021862 21861108 21861237 0.43 [{'connected_gene': 'LDLRAD2', 'score': 13.04}, {'connected_gene': 'HSPG2', 'score': 12.98}, {'connected_gene': 'USP48', 'score': 11.45}, {'connected_gene': 'GC01P021842', 'score': 0.37}, {'connected_gene': 'GC01M021883', 'score': 0.34}]
chr1 GH01I021857 21857888 21858128 0.48 [{'connected_gene': 'LDLRAD2', 'score': 13.02}, {'connected_gene': 'HSPG2', 'score': 12.96}, {'connected_gene': 'USP48', 'score': 11.48}, {'connected_gene': 'GC01P021842', 'score': 0.37}, {'connected_gene': 'GC01M021883', 'score': 0.31}]
chr1 GH01I021963 21963565 21964717 1.3 [{'connected_gene': 'HSPG2', 'score': 12.98}, {'connected_gene': 'USP48', 'score': 11.38}, {'connected_gene': 'RAP1GAP', 'score': 10.88}, {'connected_gene': 'CDC42', 'score': 6.9}, {'connected_gene': 'ENSG00000283234', 'score': 0.44}, {'connected_gene': 'CELA3B', 'score': 0.39}]
chr1 GH01I021961 21961231 21962803 0.46 [{'connected_gene': 'HSPG2', 'score': 13.01}, {'connected_gene': 'USP48', 'score': 11.39}, {'connected_gene': 'RAP1GAP', 'score': 10.88}, {'connected_gene': 'CDC42', 'score': 7.06}, {'connected_gene': 'RNU6-1022P', 'score': 6.25}, {'connected_gene': 'ENSG00000283234', 'score': 0.44}, {'connected_gene': 'CELA3B', 'score': 0.39}]
chr1 GH01I021918 21918664 21940832 2.76 [{'connected_gene': 'HSPG2', 'score': 570.66}, {'connected_gene': 'GC01P021930', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 11.1}, {'connected_gene': 'CELA3B', 'score': 6.26}, {'connected_gene': 'GC01M021926', 'score': 0.77}, {'connected_gene': 'RPL21P29', 'score': 0.34}]
chr1 GH01I022037 22037359 22044042 1.67 [{'connected_gene': 'LINC00339', 'score': 47.94}, {'connected_gene': 'ZBTB40', 'score': 13.34}, {'connected_gene': 'HSPG2', 'score': 5.76}, {'connected_gene': 'LINC01635', 'score': 5.5}, {'connected_gene': 'CDC42-IT1', 'score': 5.04}, {'connected_gene': 'USP48', 'score': 1.15}, {'connected_gene': 'GC01M022038', 'score': 0.77}, {'connected_gene': 'LOC105376841', 'score': 0.39}, {'connected_gene': 'CDC42', 'score': 0.39}]
chr1 GH01I022047 22047876 22049421 1.59 [{'connected_gene': 'LINC00339', 'score': 32.0}, {'connected_gene': 'HSPG2', 'score': 11.66}, {'connected_gene': 'ZBTB40', 'score': 11.28}, {'connected_gene': 'USP48', 'score': 10.27}, {'connected_gene': 'LDLRAD2', 'score': 10.12}, {'connected_gene': 'KDM1A', 'score': 10.05}, {'connected_gene': 'CDC42', 'score': 1.94}, {'connected_gene': 'LOC105376841', 'score': 0.77}, {'connected_gene': 'GC01M022038', 'score': 0.39}]
chr1 GH01I022023 22023843 22027633 1.81 [{'connected_gene': 'LINC00339', 'score': 656.69}, {'connected_gene': 'LINC01635', 'score': 556.05}, {'connected_gene': 'ZBTB40', 'score': 36.85}, {'connected_gene': 'CDC42-IT1', 'score': 31.55}, {'connected_gene': 'ENSG00000271428', 'score': 20.23}, {'connected_gene': 'KDM1A', 'score': 14.07}, {'connected_gene': 'HSPG2', 'score': 11.42}, {'connected_gene': 'NBPF3', 'score': 11.34}, {'connected_gene': 'CDC42', 'score': 11.32}, {'connected_gene': 'WNT4', 'score': 10.34}, {'connected_gene': 'USP48', 'score': 10.04}, {'connected_gene': 'ZBTB40-IT1', 'score': 9.7}]
chr1 GH01I021312 21312480 21331166 1.88 [{'connected_gene': 'ECE1', 'score': 32.2}, {'connected_gene': 'NBPF3', 'score': 17.93}, {'connected_gene': 'ENSG00000236936', 'score': 11.68}, {'connected_gene': 'EIF4G3', 'score': 11.33}, {'connected_gene': 'USP48', 'score': 10.6}, {'connected_gene': 'NBPF2P', 'score': 4.74}, {'connected_gene': 'ALPL', 'score': 2.16}, {'connected_gene': 'LOC100506801', 'score': 0.31}]
chr1 GH01I021331 21331602 21346770 2.9 [{'connected_gene': 'ECE1', 'score': 584.18}, {'connected_gene': 'HP1BP3', 'score': 100.88}, {'connected_gene': 'NBPF3', 'score': 64.56}, {'connected_gene': 'USP48', 'score': 59.01}, {'connected_gene': 'NBPF2P', 'score': 51.3}, {'connected_gene': 'CDC42-IT1', 'score': 20.29}, {'connected_gene': 'LDLRAD2', 'score': 11.49}, {'connected_gene': 'ENSG00000236936', 'score': 11.44}, {'connected_gene': 'HSPG2', 'score': 10.89}, {'connected_gene': 'MUL1', 'score': 10.78}, {'connected_gene': 'ENSG00000271428', 'score': 10.65}, {'connected_gene': 'DDOST', 'score': 10.26}, {'connected_gene': 'ALPL', 'score': 6.03}, {'connected_gene': 'EIF4G3', 'score': 4.9}, {'connected_gene': 'LOC100506801', 'score': 0.25}]
chr1 GH01I021791 21791227 21792439 1.21 [{'connected_gene': 'GC01P021790', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 41.67}, {'connected_gene': 'ZBTB40', 'score': 13.27}, {'connected_gene': 'LDLRAD2', 'score': 0.34}]
chr1 GH01I021789 21789477 21790753 0.49 [{'connected_gene': 'GC01P021790', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 25.05}, {'connected_gene': 'NBPF3', 'score': 13.53}, {'connected_gene': 'NBPF2P', 'score': 11.33}, {'connected_gene': 'LDLRAD2', 'score': 0.34}]
chr1 GH01I021955 21955151 21958614 1.27 [{'connected_gene': 'ENSG00000283234', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 22.47}, {'connected_gene': 'NBPF3', 'score': 9.76}, {'connected_gene': 'CELA3B', 'score': 6.48}]
chr1 GH01I021958 21958748 21958897 0.63 [{'connected_gene': 'ENSG00000283234', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 11.12}, {'connected_gene': 'CELA3B', 'score': 0.37}]
chr16 GH16I023114 23114074 23116076 0.54 [{'connected_gene': 'PIR56769', 'score': 550.77}, {'connected_gene': 'USP31', 'score': 20.3}, {'connected_gene': 'GC16P023106', 'score': 0.44}]
chr1 GH01I021767 21767002 21769284 1.17 [{'connected_gene': 'ENSG00000231978', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 28.53}, {'connected_gene': 'GC01P021743', 'score': 0.31}]
chr16 GH16I023080 23079740 23079889 0.54 [{'connected_gene': 'GC16M023077', 'score': 0.77}, {'connected_gene': 'ENSG00000260566', 'score': 0.37}, {'connected_gene': 'USP31', 'score': 0.2}]
chr1 GH01I021787 21787631 21789157 0.82 [{'connected_gene': 'GC01P021790', 'score': 550.77}, {'connected_gene': 'USP48', 'score': 26.48}]
chr16 GH16I023110 23110200 23110818 0.2 [{'connected_gene': 'PIR56769', 'score': 0.77}, {'connected_gene': 'GC16P023106', 'score': 0.77}, {'connected_gene': 'USP31', 'score': 0.28}]
chr1 GH01I022689 22689271 22690245 0.83 [{'connected_gene': 'ENSG00000225952', 'score': 11.11}, {'connected_gene': 'LACTBL1', 'score': 10.81}, {'connected_gene': 'USP48', 'score': 5.5}, {'connected_gene': 'GC01P022705', 'score': 0.37}, {'connected_gene': 'GC01P022661', 'score': 0.31}, {'connected_gene': 'GC01P022662', 'score': 0.31}]
chr1 GH01I021884 21884728 21887795 0.65 [{'connected_gene': 'GC01M021883', 'score': 550.77}, {'connected_gene': 'HSPG2', 'score': 24.01}, {'connected_gene': 'LDLRAD2', 'score': 22.5}, {'connected_gene': 'USP48', 'score': 11.3}, {'connected_gene': 'LINC00339', 'score': 5.76}, {'connected_gene': 'RPL21P29', 'score': 0.34}]

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