PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000400286	[[86366924, 86370667], [86373048, 86373623]]	[[86368117, 86370643]]
NM_032229	[[86366921, 86370667], [86373048, 86373483]]	[[86368117, 86370643]]

Promoter

Chrom	Start	End	Description
chr13	86373423	86373434	CAGE_peak_6_at_SLITRK6_5end
chr13	86373448	86373468	CAGE_peak_3_at_SLITRK6_5end
chr13	86373476	86373501	CAGE_peak_4_at_SLITRK6_5end
chr13	86373510	86373529	CAGE_peak_1_at_SLITRK6_5end
chr13	86373536	86373560	CAGE_peak_2_at_SLITRK6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I085693	85693899	85694376	0.31	[{'connected_gene': 'SLITRK6', 'score': 0.14}, {'connected_gene': 'GC13M085585', 'score': 0.14}, {'connected_gene': 'RNU6-72P', 'score': 0.14}]
chr13	GH13I085588	85588771	85590429	0.38	[{'connected_gene': 'SLITRK6', 'score': 4.43}, {'connected_gene': 'GC13M085585', 'score': 0.77}, {'connected_gene': 'RNU6-72P', 'score': 0.77}]
chr13	GH13I085799	85799001	85800035	1.36	[{'connected_gene': 'SLITRK6', 'score': 550.77}, {'connected_gene': 'ENSG00000278580', 'score': 0.28}]
chr13	GH13I085651	85651526	85651675	0.49	[{'connected_gene': 'RNU6-72P', 'score': 11.21}, {'connected_gene': 'GC13M085585', 'score': 0.2}, {'connected_gene': 'SLITRK6', 'score': 0.11}]
chr13	GH13I085661	85661695	85663058	0.2	[{'connected_gene': 'RNU6-72P', 'score': 11.49}, {'connected_gene': 'GC13M085585', 'score': 0.18}, {'connected_gene': 'SLITRK6', 'score': 0.12}]
chr13	GH13I085728	85728774	85729828	0.31	[{'connected_gene': 'RNU6-72P', 'score': 10.7}, {'connected_gene': 'SLITRK6', 'score': 0.19}, {'connected_gene': 'GC13M085585', 'score': 0.11}]
chr13	GH13I085824	85824996	85826145	0.31	[{'connected_gene': 'ENSG00000278580', 'score': 0.39}, {'connected_gene': 'SLITRK6', 'score': 0.31}]
chr13	GH13I085608	85608726	85608866	0.31	[{'connected_gene': 'GC13M085585', 'score': 0.34}, {'connected_gene': 'RNU6-72P', 'score': 0.34}, {'connected_gene': 'SLITRK6', 'score': 0.08}]
chr13	GH13I085609	85608426	85608675	0.31	[{'connected_gene': 'GC13M085585', 'score': 0.34}, {'connected_gene': 'RNU6-72P', 'score': 0.34}, {'connected_gene': 'SLITRK6', 'score': 0.08}]
chr13	GH13I085585	85585458	85587571	0.56	[{'connected_gene': 'GC13M085585', 'score': 550.77}, {'connected_gene': 'RNU6-72P', 'score': 550.77}, {'connected_gene': 'SLITRK6', 'score': 0.08}]
chr13	GH13I085666	85666466	85666675	0.38	[{'connected_gene': 'GC13M085585', 'score': 0.18}, {'connected_gene': 'RNU6-72P', 'score': 0.18}, {'connected_gene': 'SLITRK6', 'score': 0.12}]