PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000237281	[[146114637, 146121445], [146125507, 146127557], [146135738, 146135889]]	[[146121241, 146121445], [146125507, 146127541]]
NM_032145	[[146119270, 146121445], [146125507, 146127557], [146135738, 146135921]]	[[146121241, 146121445], [146125507, 146127541]]
NM_001348092	[[146119270, 146121445], [146125507, 146127557], [146135827, 146135921]]	[[146121241, 146121445], [146125507, 146127541]]

Promoter

Chrom	Start	End	Description
chr6	146135852	146135871	CAGE_peak_2_at_FBXO30_5end
chr6	146135880	146135952	CAGE_peak_1_at_FBXO30_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I145812	145812308	145816431	2.09	[{'connected_gene': 'FBXO30', 'score': 550.77}, {'connected_gene': 'SHPRH', 'score': 19.79}, {'connected_gene': 'LOC100507557', 'score': 18.29}, {'connected_gene': 'KATNBL1P6', 'score': 9.75}, {'connected_gene': 'ENSG00000280184', 'score': 0.34}]
chr6	GH06I146289	146289846	146291114	1.25	[{'connected_gene': 'FBXO30', 'score': 8.95}, {'connected_gene': 'ENSG00000270638', 'score': 4.86}, {'connected_gene': 'RAB32', 'score': 1.95}, {'connected_gene': 'RNA5SP222', 'score': 0.25}, {'connected_gene': 'GC06P146172', 'score': 0.13}, {'connected_gene': 'GRM1', 'score': 0.05}]
chr6	GH06I145882	145882405	145882554	0.2	[{'connected_gene': 'FBXO30', 'score': 11.58}, {'connected_gene': 'LOC100507557', 'score': 11.48}, {'connected_gene': 'GC06P145874', 'score': 0.44}, {'connected_gene': 'GC06M145895', 'score': 0.39}, {'connected_gene': 'SHPRH', 'score': 0.18}]
chr6	GH06I145743	145743462	145743785	0.27	[{'connected_gene': 'FBXO30', 'score': 3.0}, {'connected_gene': 'LOC100507557', 'score': 0.44}, {'connected_gene': 'ENSG00000270828', 'score': 0.44}, {'connected_gene': 'LOC105378039', 'score': 0.34}]
chr6	GH06I145842	145842090	145842643	0.2	[{'connected_gene': 'FBXO30', 'score': 11.66}, {'connected_gene': 'LOC100507557', 'score': 11.49}, {'connected_gene': 'GC06P145856', 'score': 0.39}, {'connected_gene': 'GC06P145831', 'score': 0.39}]
chr6	GH06I145846	145845225	145845374	0.56	[{'connected_gene': 'FBXO30', 'score': 12.74}, {'connected_gene': 'LOC100507557', 'score': 12.58}, {'connected_gene': 'GC06P145856', 'score': 0.39}, {'connected_gene': 'GC06P145831', 'score': 0.39}]
chr6	GH06I145845	145845045	145845194	0.57	[{'connected_gene': 'FBXO30', 'score': 12.74}, {'connected_gene': 'LOC100507557', 'score': 12.58}, {'connected_gene': 'GC06P145856', 'score': 0.39}, {'connected_gene': 'GC06P145831', 'score': 0.39}]
chr6	GH06I145819	145819685	145819862	0.31	[{'connected_gene': 'FBXO30', 'score': 0.77}, {'connected_gene': 'GC06P145825', 'score': 0.44}, {'connected_gene': 'LOC100507557', 'score': 0.18}]
chr6	GH06I145808	145808352	145808411	0.86	[{'connected_gene': 'FBXO30', 'score': 550.44}, {'connected_gene': 'ENSG00000280184', 'score': 0.37}, {'connected_gene': 'LOC100507557', 'score': 0.19}]
chr6	GH06I145816	145816505	145816543	0.52	[{'connected_gene': 'FBXO30', 'score': 550.77}, {'connected_gene': 'GC06P145825', 'score': 0.44}, {'connected_gene': 'LOC100507557', 'score': 0.18}]
chr6	GH06I145818	145818905	145819114	0.2	[{'connected_gene': 'EPM2A', 'score': 6.21}, {'connected_gene': 'FBXO30', 'score': 0.77}, {'connected_gene': 'GC06P145825', 'score': 0.44}, {'connected_gene': 'LOC100507557', 'score': 0.18}]
chr6	GH06I145890	145890862	145892292	0.52	[{'connected_gene': 'LOC100507557', 'score': 26.71}, {'connected_gene': 'FBXO30', 'score': 11.08}, {'connected_gene': 'GC06M145895', 'score': 0.44}, {'connected_gene': 'GC06P145874', 'score': 0.37}, {'connected_gene': 'SHPRH', 'score': 0.19}]