PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000446982	[[62453802, 62454155], [62462593, 62463260], [62536320, 62536533], [62541852, 62542109], [62546057, 62546146], [62547551, 62547783]]	[[62462737, 62463260], [62536320, 62536533], [62541852, 62542109], [62546057, 62546146], [62547551, 62547621]]
ENST00000430451	[[62462540, 62463260], [62536320, 62536533], [62541852, 62542109], [62547551, 62547992], [62550913, 62551103], [62567111, 62568424]]	[[62462737, 62463260], [62536320, 62536533], [62541852, 62542109], [62547551, 62547992], [62550913, 62551103], [62567111, 62567425]]
ENST00000555409	[[62462551, 62463260], [62536320, 62536533], [62541852, 62542109], [62546057, 62546146], [62547551, 62547992], [62550913, 62551103], [62567111, 62568431]]	[[62462737, 62463260], [62536320, 62536533], [62541852, 62542109], [62546057, 62546146], [62547551, 62547621]]
NM_031914	[[62462540, 62463260], [62536320, 62536533], [62541852, 62542109], [62547551, 62547992], [62550913, 62551103], [62567111, 62568427]]	[[62462737, 62463260], [62536320, 62536533], [62541852, 62542109], [62547551, 62547992], [62550913, 62551103], [62567111, 62567425]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I061812	61812400	61812801	0.82	[{'connected_gene': 'SYT16', 'score': 550.77}, {'connected_gene': 'SNAPC1', 'score': 9.7}, {'connected_gene': 'COX4I1P1', 'score': 0.37}, {'connected_gene': 'GC14P061748', 'score': 0.21}]
chr14	GH14I062457	62457038	62457323	0.22	[{'connected_gene': 'SYT16', 'score': 2.9}, {'connected_gene': 'LOC105370528', 'score': 0.28}, {'connected_gene': 'LOC105370529', 'score': 0.15}]
chr14	GH14I062169	62169939	62169947	0.22	[{'connected_gene': 'SYT16', 'score': 4.83}, {'connected_gene': 'LOC100419079', 'score': 0.37}, {'connected_gene': 'GC14P062220', 'score': 0.23}]
chr14	GH14I061965	61964023	61964172	0.2	[{'connected_gene': 'SYT16', 'score': 11.1}, {'connected_gene': 'GC14P061915', 'score': 0.25}, {'connected_gene': 'GC14M061941', 'score': 0.2}]
chr14	GH14I061948	61948543	61948692	0.2	[{'connected_gene': 'SYT16', 'score': 10.92}, {'connected_gene': 'GC14P061915', 'score': 0.29}, {'connected_gene': 'GC14M061941', 'score': 0.18}]
chr14	GH14I061987	61987738	61987760	0.22	[{'connected_gene': 'SYT16', 'score': 2.83}, {'connected_gene': 'GC14M061941', 'score': 0.26}, {'connected_gene': 'GC14P061915', 'score': 0.19}]
chr14	GH14I061964	61964479	61966209	0.59	[{'connected_gene': 'SYT16', 'score': 11.74}, {'connected_gene': 'GC14P061915', 'score': 0.23}, {'connected_gene': 'GC14M061941', 'score': 0.21}]
chr14	GH14I061925	61925234	61928879	0.63	[{'connected_gene': 'SNAPC1', 'score': 4.83}, {'connected_gene': 'GC14P061915', 'score': 0.39}, {'connected_gene': 'GC14M061941', 'score': 0.15}, {'connected_gene': 'SYT16', 'score': 0.13}]
chr14	GH14I061934	61934023	61935449	0.38	[{'connected_gene': 'SNAPC1', 'score': 4.89}, {'connected_gene': 'GC14P061915', 'score': 0.37}, {'connected_gene': 'GC14M061941', 'score': 0.16}, {'connected_gene': 'SYT16', 'score': 0.13}]
chr14	GH14I061860	61860403	61860552	0.56	[{'connected_gene': 'SNAPC1', 'score': 4.66}, {'connected_gene': 'MOCS3P1', 'score': 0.77}, {'connected_gene': 'COX4I1P1', 'score': 0.31}, {'connected_gene': 'SYT16', 'score': 0.25}]
chr14	GH14I061837	61837703	61837872	0.75	[{'connected_gene': 'SNAPC1', 'score': 10.7}, {'connected_gene': 'LINC01303', 'score': 10.41}, {'connected_gene': 'FLJ22447', 'score': 10.41}, {'connected_gene': 'COX4I1P1', 'score': 0.44}, {'connected_gene': 'MOCS3P1', 'score': 0.31}, {'connected_gene': 'SYT16', 'score': 0.31}]
chr14	GH14I061839	61839703	61839852	0.31	[{'connected_gene': 'SNAPC1', 'score': 10.7}, {'connected_gene': 'LINC01303', 'score': 10.41}, {'connected_gene': 'FLJ22447', 'score': 10.41}, {'connected_gene': 'COX4I1P1', 'score': 0.44}, {'connected_gene': 'MOCS3P1', 'score': 0.34}, {'connected_gene': 'SYT16', 'score': 0.31}]
chr14	GH14I062097	62097036	62098884	0.38	[{'connected_gene': 'LINC00643', 'score': 6.65}, {'connected_gene': 'GC14P062110', 'score': 0.39}, {'connected_gene': 'ENSG00000258842', 'score': 0.37}, {'connected_gene': 'SYT16', 'score': 0.06}]
chr14	GH14I062076	62076750	62079139	0.59	[{'connected_gene': 'LINC00643', 'score': 5.47}, {'connected_gene': 'ENSG00000258842', 'score': 0.77}, {'connected_gene': 'GC14M061941', 'score': 0.25}, {'connected_gene': 'SYT16', 'score': 0.06}]
chr14	GH14I061615	61615493	61617101	1.1	[{'connected_gene': 'FLJ22447', 'score': 16.92}, {'connected_gene': 'LINC01303', 'score': 11.42}, {'connected_gene': 'HIF1A', 'score': 11.08}, {'connected_gene': 'SYT16', 'score': 2.23}, {'connected_gene': 'GC14P061590', 'score': 0.31}, {'connected_gene': 'GC14P061694', 'score': 0.18}, {'connected_gene': 'ENSG00000258989', 'score': 0.17}]
chr14	GH14I061872	61872583	61872692	0.69	[{'connected_gene': 'MOCS3P1', 'score': 0.44}, {'connected_gene': 'GC14P061915', 'score': 0.26}, {'connected_gene': 'SYT16', 'score': 0.21}]
chr14	GH14I061867	61867268	61867800	0.69	[{'connected_gene': 'MOCS3P1', 'score': 0.77}, {'connected_gene': 'GC14P061915', 'score': 0.25}, {'connected_gene': 'SYT16', 'score': 0.22}]
chr14	GH14I061580	61580673	61589002	1.53	[{'connected_gene': 'HIF1A', 'score': 14.45}, {'connected_gene': 'SYT16', 'score': 1.88}, {'connected_gene': 'GC14P061590', 'score': 0.44}, {'connected_gene': 'LINC01303', 'score': 0.39}, {'connected_gene': 'FLJ22447', 'score': 0.39}, {'connected_gene': 'ENSG00000258989', 'score': 0.22}]
chr14	GH14I061510	61510001	61518432	1.62	[{'connected_gene': 'HIF1A', 'score': 15.32}, {'connected_gene': 'LINC01303', 'score': 10.73}, {'connected_gene': 'FLJ22447', 'score': 10.73}, {'connected_gene': 'PRKCH', 'score': 2.37}, {'connected_gene': 'SYT16', 'score': 1.35}, {'connected_gene': 'ENSG00000258989', 'score': 0.39}, {'connected_gene': 'GC14M061347', 'score': 0.29}]
chr14	GH14I061831	61831732	61831927	0.27	[{'connected_gene': 'COX4I1P1', 'score': 550.77}, {'connected_gene': 'SNAPC1', 'score': 10.99}, {'connected_gene': 'SYT16', 'score': 0.37}]
chr14	GH14I062116	62116980	62118000	0.92	[{'connected_gene': 'LOC105370527', 'score': 550.77}, {'connected_gene': 'LINC00643', 'score': 0.77}, {'connected_gene': 'LINC00644', 'score': 0.34}, {'connected_gene': 'SYT16', 'score': 0.06}]
chr14	GH14I061622	61622397	61622406	0.22	[{'connected_gene': 'LINC01303', 'score': 11.02}, {'connected_gene': 'FLJ22447', 'score': 11.02}, {'connected_gene': 'SYT16', 'score': 3.06}, {'connected_gene': 'GC14P061590', 'score': 0.29}, {'connected_gene': 'GC14P061694', 'score': 0.19}, {'connected_gene': 'ENSG00000258989', 'score': 0.16}]
chr14	GH14I061648	61648730	61648835	0.39	[{'connected_gene': 'LINC01303', 'score': 11.36}, {'connected_gene': 'FLJ22447', 'score': 11.36}, {'connected_gene': 'HIF1A', 'score': 11.34}, {'connected_gene': 'SNAPC1', 'score': 10.46}, {'connected_gene': 'SYT16', 'score': 1.84}, {'connected_gene': 'PRKCH', 'score': 1.39}, {'connected_gene': 'GC14P061694', 'score': 0.25}, {'connected_gene': 'GC14P061590', 'score': 0.22}, {'connected_gene': 'ENSG00000258989', 'score': 0.13}]
chr14	GH14I061940	61940303	61941425	0.38	[{'connected_gene': 'GC14P061915', 'score': 0.31}, {'connected_gene': 'GC14M061941', 'score': 0.17}, {'connected_gene': 'SYT16', 'score': 0.13}]
chr14	GH14I062006	62006483	62006612	0.2	[{'connected_gene': 'GC14M061941', 'score': 0.34}, {'connected_gene': 'GC14P061915', 'score': 0.16}, {'connected_gene': 'SYT16', 'score': 0.08}]
chr14	GH14I061930	61930252	61931115	0.38	[{'connected_gene': 'GC14P061915', 'score': 0.37}, {'connected_gene': 'GC14M061941', 'score': 0.15}, {'connected_gene': 'SYT16', 'score': 0.13}]
chr14	GH14I061973	61973676	61974992	0.31	[{'connected_gene': 'GC14M061941', 'score': 0.23}, {'connected_gene': 'GC14P061915', 'score': 0.22}, {'connected_gene': 'SYT16', 'score': 0.1}]
chr14	GH14I062080	62080587	62081892	0.74	[{'connected_gene': 'ENSG00000258842', 'score': 550.77}, {'connected_gene': 'GC14P062110', 'score': 0.31}, {'connected_gene': 'SYT16', 'score': 0.06}]
chr14	GH14I061926	61925083	61925232	0.38	[{'connected_gene': 'GC14P061915', 'score': 0.39}, {'connected_gene': 'GC14M061941', 'score': 0.15}, {'connected_gene': 'SYT16', 'score': 0.14}]
chr14	GH14I061941	61941543	61941692	0.2	[{'connected_gene': 'GC14P061915', 'score': 0.31}, {'connected_gene': 'GC14M061941', 'score': 0.17}, {'connected_gene': 'SYT16', 'score': 0.13}]
chr14	GH14I062056	62056202	62056999	0.2	[{'connected_gene': 'ENSG00000258842', 'score': 0.34}, {'connected_gene': 'GC14M061941', 'score': 0.31}, {'connected_gene': 'SYT16', 'score': 0.07}]
chr14	GH14I061894	61894603	61894712	0.57	[{'connected_gene': 'GC14P061915', 'score': 0.34}, {'connected_gene': 'MOCS3P1', 'score': 0.29}, {'connected_gene': 'SYT16', 'score': 0.18}]
chr14	GH14I061889	61889361	61890558	0.82	[{'connected_gene': 'GC14P061915', 'score': 0.31}, {'connected_gene': 'MOCS3P1', 'score': 0.31}, {'connected_gene': 'SYT16', 'score': 0.18}]