PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000355178	[[81267843, 81268125], [81283377, 81283497], [81354313, 81354421], [81443008, 81443936]]	[[81283389, 81283497], [81354313, 81354421], [81443008, 81443170]]
ENST00000282185	[[81267843, 81268125], [81283377, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549248], [81549886, 81551958]]	[[81283389, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549244]]
ENST00000458350	[[81267869, 81268125], [81272011, 81272146], [81283377, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549248], [81549886, 81550611]]	[[81283389, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549244]]
ENST00000513443	[[81267975, 81268410], [81283377, 81283497], [81354313, 81354421], [81443008, 81443323]]	[[81283389, 81283497], [81354313, 81354421], [81443008, 81443170]]
ENST00000504770	[[81268079, 81268125], [81283377, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81538615, 81538701], [81548380, 81548478], [81549132, 81549250]]	[[81283389, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81538615, 81538678]]
ENST00000513634	[[81283376, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548532]]	[[81283389, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548482]]
ENST00000508814	[[81407210, 81407274], [81474308, 81474406], [81548380, 81548478], [81571963, 81572116]]	None
ENST00000514253	[[81460263, 81460356], [81474308, 81474406], [81571963, 81572676]]	None
ENST00000510085	[[81267844, 81268125], [81268973, 81269120], [81283377, 81283498]]	[[81283389, 81283498]]
NM_031482	[[81267843, 81268125], [81283377, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549248], [81549886, 81551213]]	[[81283389, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549244]]
NM_001131028	[[81267843, 81268125], [81272011, 81272146], [81283377, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549248], [81549886, 81551213]]	[[81283389, 81283497], [81354313, 81354421], [81460217, 81460356], [81474308, 81474406], [81548380, 81548478], [81549132, 81549244]]

Promoter

Chrom	Start	End	Description
chr5	81267834	81267868	CAGE_peak_1_at_ATG10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I082274	82274157	82275562	0.74	[{'connected_gene': 'ATP6AP1L', 'score': 77.22}, {'connected_gene': 'ZCCHC9', 'score': 24.81}, {'connected_gene': 'CKMT2-AS1', 'score': 18.99}, {'connected_gene': 'GC05M082258', 'score': 0.77}, {'connected_gene': 'GC05P082278', 'score': 0.77}, {'connected_gene': 'RPS23', 'score': 0.77}, {'connected_gene': 'ENSG00000251374', 'score': 0.44}, {'connected_gene': 'ATG10', 'score': 0.06}]
chr5	GH05I082404	82404156	82407487	1.61	[{'connected_gene': 'ATP6AP1L', 'score': 29.31}, {'connected_gene': 'ATG10', 'score': 11.98}, {'connected_gene': 'RPS23', 'score': 8.35}, {'connected_gene': 'LOC105379052', 'score': 5.68}, {'connected_gene': 'PIR35354', 'score': 0.31}, {'connected_gene': 'GC05P082523', 'score': 0.13}, {'connected_gene': 'GC05P082524', 'score': 0.13}]
chr5	GH05I081778	81778394	81780343	1.23	[{'connected_gene': 'ATP6AP1L', 'score': 5.41}, {'connected_gene': 'ATG10', 'score': 5.39}, {'connected_gene': 'SSBP2', 'score': 0.31}, {'connected_gene': 'ENSG00000249483', 'score': 0.19}]
chr5	GH05I082402	82402388	82404064	0.63	[{'connected_gene': 'ATP6AP1L', 'score': 7.69}, {'connected_gene': 'ATG10', 'score': 6.46}, {'connected_gene': 'LOC105379052', 'score': 4.94}, {'connected_gene': 'PIR35354', 'score': 0.31}, {'connected_gene': 'GC05P082523', 'score': 0.13}, {'connected_gene': 'GC05P082524', 'score': 0.13}]
chr5	GH05I082273	82273082	82273231	0.43	[{'connected_gene': 'ATP6AP1L', 'score': 46.96}, {'connected_gene': 'GC05P082278', 'score': 0.44}, {'connected_gene': 'GC05M082258', 'score': 0.44}, {'connected_gene': 'ENSG00000251374', 'score': 0.44}, {'connected_gene': 'ATG10', 'score': 0.06}]
chr5	GH05I082276	82276179	82279774	2.02	[{'connected_gene': 'ATP6AP1L', 'score': 627.64}, {'connected_gene': 'RPS23', 'score': 560.73}, {'connected_gene': 'GC05M082258', 'score': 550.77}, {'connected_gene': 'GC05P082278', 'score': 550.77}, {'connected_gene': 'ZCCHC9', 'score': 36.71}, {'connected_gene': 'ATG10', 'score': 22.77}, {'connected_gene': 'CKMT2-AS1', 'score': 10.43}, {'connected_gene': 'ENSG00000251374', 'score': 0.39}]
chr5	GH05I082386	82386084	82389916	1.44	[{'connected_gene': 'ATP6AP1L', 'score': 24.76}, {'connected_gene': 'RPS23', 'score': 11.75}, {'connected_gene': 'ATG10', 'score': 10.11}, {'connected_gene': 'PIR35354', 'score': 0.44}, {'connected_gene': 'GC05P082523', 'score': 0.12}, {'connected_gene': 'GC05P082524', 'score': 0.12}]
chr5	GH05I081970	81970355	81973197	2.05	[{'connected_gene': 'ATG10', 'score': 602.27}, {'connected_gene': 'ATP6AP1L', 'score': 16.97}, {'connected_gene': 'RPS23', 'score': 14.43}, {'connected_gene': 'SEM1P1', 'score': 0.18}]
chr5	GH05I082412	82412711	82414535	0.99	[{'connected_gene': 'ATG10', 'score': 10.66}, {'connected_gene': 'ATP6AP1L', 'score': 9.39}, {'connected_gene': 'RPS23', 'score': 7.2}, {'connected_gene': 'PIR35354', 'score': 0.28}, {'connected_gene': 'GC05P082523', 'score': 0.14}, {'connected_gene': 'GC05P082524', 'score': 0.14}]
chr5	GH05I082340	82340034	82340626	0.4	[{'connected_gene': 'ATG10', 'score': 25.97}, {'connected_gene': 'ATP6AP1L', 'score': 18.36}, {'connected_gene': 'GC05M082354', 'score': 0.34}, {'connected_gene': 'GC05M082258', 'score': 0.21}]
chr5	GH05I082319	82319227	82319875	0.46	[{'connected_gene': 'ATG10', 'score': 18.36}, {'connected_gene': 'GC05M082258', 'score': 0.28}, {'connected_gene': 'ATP6AP1L', 'score': 0.26}, {'connected_gene': 'GC05M082354', 'score': 0.25}]
chr5	GH05I082356	82356486	82358711	1.67	[{'connected_gene': 'ATG10', 'score': 25.74}, {'connected_gene': 'RPS23', 'score': 9.93}, {'connected_gene': 'GC05M082354', 'score': 0.44}, {'connected_gene': 'ATP6AP1L', 'score': 0.18}, {'connected_gene': 'GC05M082258', 'score': 0.18}]
chr5	GH05I081856	81856735	81858056	0.85	[{'connected_gene': 'ATG10', 'score': 11.67}, {'connected_gene': 'ATG10-AS1', 'score': 9.92}, {'connected_gene': 'ATP6AP1L', 'score': 7.82}, {'connected_gene': 'ENSG00000249483', 'score': 0.44}, {'connected_gene': 'SEM1P1', 'score': 0.28}]
chr5	GH05I081979	81979972	81981248	0.52	[{'connected_gene': 'ATG10', 'score': 30.91}, {'connected_gene': 'ATG10-AS1', 'score': 10.51}, {'connected_gene': 'ATP6AP1L', 'score': 7.75}, {'connected_gene': 'ATG10-IT1', 'score': 0.39}]
chr5	GH05I082018	82018600	82019000	1	[{'connected_gene': 'ATG10', 'score': 28.86}, {'connected_gene': 'ATG10-AS1', 'score': 10.66}, {'connected_gene': 'PPIAP11', 'score': 0.44}, {'connected_gene': 'GC05P082067', 'score': 0.25}]
chr5	GH05I082031	82031202	82032190	0.46	[{'connected_gene': 'ATG10', 'score': 21.58}, {'connected_gene': 'ATG10-AS1', 'score': 12.4}, {'connected_gene': 'PPIAP11', 'score': 0.34}, {'connected_gene': 'GC05P082067', 'score': 0.28}]
chr5	GH05I081898	81898001	81899200	0.56	[{'connected_gene': 'ATG10', 'score': 19.93}, {'connected_gene': 'ATG10-AS1', 'score': 10.01}, {'connected_gene': 'SEM1P1', 'score': 0.44}]
chr5	GH05I082105	82105601	82107000	0.52	[{'connected_gene': 'ATG10', 'score': 21.07}, {'connected_gene': 'ATG10-AS1', 'score': 11.9}, {'connected_gene': 'PIR51236', 'score': 0.31}, {'connected_gene': 'GC05P082094', 'score': 0.31}, {'connected_gene': 'GC05P082140', 'score': 0.29}]
chr5	GH05I082163	82163309	82166651	1.07	[{'connected_gene': 'ATG10', 'score': 18.28}, {'connected_gene': 'ATG10-AS1', 'score': 10.9}, {'connected_gene': 'GC05M082134', 'score': 0.39}, {'connected_gene': 'GC05P082140', 'score': 0.34}]
chr5	GH05I082634	82634462	82636489	1.11	[{'connected_gene': 'ATG10', 'score': 5.47}, {'connected_gene': 'GC05P082633', 'score': 0.77}, {'connected_gene': 'GC05M082700', 'score': 0.2}]
chr5	GH05I081748	81748306	81752772	2.3	[{'connected_gene': 'SSBP2', 'score': 550.77}, {'connected_gene': 'ZCCHC9', 'score': 28.47}, {'connected_gene': 'CKMT2-AS1', 'score': 11.71}, {'connected_gene': 'RPS23', 'score': 11.63}, {'connected_gene': 'ATG10', 'score': 10.14}, {'connected_gene': 'GC05M081517', 'score': 0.07}]
chr5	GH05I082622	82622130	82624236	0.81	[{'connected_gene': 'VCAN', 'score': 5.65}, {'connected_gene': 'ATG10', 'score': 4.75}, {'connected_gene': 'GC05P082633', 'score': 0.39}, {'connected_gene': 'ENSG00000248870', 'score': 0.28}]
chr5	GH05I081212	81212252	81212989	0.6	[{'connected_gene': 'CKMT2', 'score': 11.8}, {'connected_gene': 'ENSG00000249772', 'score': 10.06}, {'connected_gene': 'ENSG00000248794', 'score': 9.84}, {'connected_gene': 'ATG10', 'score': 4.79}, {'connected_gene': 'GC05P081229', 'score': 0.39}, {'connected_gene': 'CKMT2-AS1', 'score': 0.17}, {'connected_gene': 'RASGRF2', 'score': 0.07}]
chr5	GH05I081954	81954751	81955283	0.88	[{'connected_gene': 'ATG10-AS1', 'score': 10.78}, {'connected_gene': 'ATP6AP1L', 'score': 5.01}, {'connected_gene': 'ATG10', 'score': 0.37}, {'connected_gene': 'SEM1P1', 'score': 0.21}]
chr5	GH05I082169	82169318	82169540	0.38	[{'connected_gene': 'ATG10-AS1', 'score': 10.83}, {'connected_gene': 'ATP6AP1L', 'score': 2.18}, {'connected_gene': 'GC05M082134', 'score': 0.44}, {'connected_gene': 'GC05P082140', 'score': 0.31}, {'connected_gene': 'ATG10', 'score': 0.08}]
chr5	GH05I082100	82100822	82100931	0.52	[{'connected_gene': 'ATG10-AS1', 'score': 12.42}, {'connected_gene': 'PIR51236', 'score': 0.34}, {'connected_gene': 'GC05P082094', 'score': 0.34}, {'connected_gene': 'GC05P082140', 'score': 0.28}, {'connected_gene': 'ATG10', 'score': 0.13}]
chr5	GH05I082183	82183962	82184071	0.6	[{'connected_gene': 'ATG10-AS1', 'score': 10.17}, {'connected_gene': 'GC05M082134', 'score': 0.44}, {'connected_gene': 'GC05P082216', 'score': 0.29}, {'connected_gene': 'ATG10', 'score': 0.08}]
chr5	GH05I082158	82158624	82159802	0.6	[{'connected_gene': 'ATG10-AS1', 'score': 10.41}, {'connected_gene': 'GC05M082134', 'score': 0.37}, {'connected_gene': 'GC05P082140', 'score': 0.37}, {'connected_gene': 'ATG10', 'score': 0.09}]
chr5	GH05I082225	82225601	82225801	0.74	[{'connected_gene': 'ATG10-AS1', 'score': 10.16}, {'connected_gene': 'GC05M082232', 'score': 0.44}, {'connected_gene': 'GC05P082216', 'score': 0.44}, {'connected_gene': 'ATG10', 'score': 0.07}]
chr5	GH05I082107	82107382	82107531	0.52	[{'connected_gene': 'ATG10-AS1', 'score': 11.9}, {'connected_gene': 'PIR51236', 'score': 0.31}, {'connected_gene': 'GC05P082094', 'score': 0.31}, {'connected_gene': 'GC05P082140', 'score': 0.29}, {'connected_gene': 'ATG10', 'score': 0.12}]
chr5	GH05I082023	82023063	82025864	0.69	[{'connected_gene': 'ATG10-AS1', 'score': 12.38}, {'connected_gene': 'PPIAP11', 'score': 0.39}, {'connected_gene': 'GC05P082067', 'score': 0.26}, {'connected_gene': 'ATG10', 'score': 0.23}]
chr5	GH05I082364	82364663	82366729	1.49	[{'connected_gene': 'GC05M082354', 'score': 550.77}, {'connected_gene': 'ATP6AP1L', 'score': 14.83}, {'connected_gene': 'ATG10', 'score': 8.65}, {'connected_gene': 'PIR35354', 'score': 0.39}]
chr5	GH05I082044	82044122	82044271	0.2	[{'connected_gene': 'GC05P082067', 'score': 0.34}, {'connected_gene': 'PPIAP11', 'score': 0.29}, {'connected_gene': 'ATG10', 'score': 0.19}]
chr5	GH05I082173	82173681	82175000	1.23	[{'connected_gene': 'GC05M082134', 'score': 550.77}, {'connected_gene': 'ATG10-AS1', 'score': 10.83}, {'connected_gene': 'GC05P082140', 'score': 0.29}, {'connected_gene': 'ATG10', 'score': 0.08}]