PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000230792	[[102884555, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895743, 102895955], [102898403, 102898494]]	[[102886561, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895743, 102895949]]
ENST00000507423	[[102886208, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895797, 102895955], [102898403, 102898490]]	[[102886561, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895797, 102895949]]
ENST00000515407	[[102890202, 102890554], [102891631, 102891790]]	None
ENST00000508889	[[102895105, 102895951], [102898403, 102898491]]	None
NM_031438	[[102884555, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895743, 102895955], [102898403, 102898502]]	[[102886561, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895743, 102895949]]
NM_001300741	[[102884555, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895797, 102895955], [102898403, 102898502]]	[[102886561, 102886672], [102887917, 102888117], [102890440, 102890554], [102891631, 102891799], [102894579, 102895169], [102895797, 102895949]]

Promoter

Chrom	Start	End	Description
chr5	102898443	102898460	CAGE_peak_2_at_NUDT12_5end
chr5	102898465	102898518	CAGE_peak_1_at_NUDT12_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I103544	103544537	103544934	0.22	[{'connected_gene': 'C5orf30', 'score': 3.52}, {'connected_gene': 'LINC02115', 'score': 0.77}, {'connected_gene': 'NUDT12', 'score': 0.37}]
chr5	GH05I103522	103522103	103524265	0.52	[{'connected_gene': 'NUDT12', 'score': 12.17}, {'connected_gene': 'PDZPH1P', 'score': 0.77}, {'connected_gene': 'ENSG00000250567', 'score': 0.14}]
chr5	GH05I103568	103568721	103570324	0.49	[{'connected_gene': 'NUDT12', 'score': 5.75}, {'connected_gene': 'LOC105379107', 'score': 0.15}]
chr5	GH05I103565	103565307	103566542	0.2	[{'connected_gene': 'NUDT12', 'score': 0.77}, {'connected_gene': 'LOC105379107', 'score': 0.15}]
chr5	GH05I103531	103531781	103533149	0.31	[{'connected_gene': 'NUDT12', 'score': 26.3}, {'connected_gene': 'LINC02115', 'score': 0.44}, {'connected_gene': 'PDZPH1P', 'score': 0.44}]
chr5	GH05I103561	103561528	103563486	1.94	[{'connected_gene': 'NUDT12', 'score': 578.05}, {'connected_gene': 'LINC02115', 'score': 0.34}]
chr5	GH05I103621	103621253	103622112	0.2	[{'connected_gene': 'LOC105379107', 'score': 0.25}, {'connected_gene': 'NUDT12', 'score': 0.22}]
chr5	GH05I103623	103623962	103625026	0.7	[{'connected_gene': 'LOC105379107', 'score': 0.25}, {'connected_gene': 'NUDT12', 'score': 0.21}]
chr5	GH05I103646	103646237	103648252	0.58	[{'connected_gene': 'LOC105379107', 'score': 0.34}, {'connected_gene': 'NUDT12', 'score': 0.18}]
chr5	GH05I103542	103542833	103542960	0.24	[{'connected_gene': 'LINC02115', 'score': 550.77}, {'connected_gene': 'C5orf30', 'score': 6.26}, {'connected_gene': 'NUDT12', 'score': 0.37}]