PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_003537	[[26031816, 26032288]]	[[26031877, 26032288]]

Promoter

Chrom	Start	End	Description
chr6	26020672	26020689	CAGE_peak_10_at_HIST1H3A_5end,CAGE_peak_10_at_HIST1H3B_5end,CAGE_peak_10_at_HIST1H3C_5end,CAGE_peak_10_at_HIST1H3D_5end,CAGE_peak_10_at_HIST1H3E_5end,CAGE_peak_10_at_HIST1H3F_5end,CAGE_peak_10_at_HIST1H3G_5end,CAGE_peak_10_at_HIST1H3I_5end,CAGE_peak_10_at_HIST1H3J_5end,CAGE_peak_11_at_HIST1H3H_5end
chr6	26032319	26032337	CAGE_peak_1_at_HIST1H3A_5end,CAGE_peak_1_at_HIST1H3B_5end,CAGE_peak_1_at_HIST1H3C_5end,CAGE_peak_1_at_HIST1H3D_5end,CAGE_peak_1_at_HIST1H3E_5end,CAGE_peak_1_at_HIST1H3F_5end,CAGE_peak_1_at_HIST1H3G_5end,CAGE_peak_1_at_HIST1H3H_5end,CAGE_peak_1_at_HIST1H3I_5end,CAGE_peak_1_at_HIST1H3J_5end
chr6	26045603	26045639	CAGE_peak_2_at_HIST1H3A_5end,CAGE_peak_2_at_HIST1H3B_5end,CAGE_peak_2_at_HIST1H3C_5end,CAGE_peak_2_at_HIST1H3D_5end,CAGE_peak_2_at_HIST1H3E_5end,CAGE_peak_2_at_HIST1H3F_5end,CAGE_peak_2_at_HIST1H3G_5end,CAGE_peak_2_at_HIST1H3I_5end,CAGE_peak_2_at_HIST1H3J_5end,CAGE_peak_3_at_HIST1H3H_5end
chr6	26197500	26197521	CAGE_peak_10_at_HIST1H3H_5end,CAGE_peak_9_at_HIST1H3A_5end,CAGE_peak_9_at_HIST1H3B_5end,CAGE_peak_9_at_HIST1H3C_5end,CAGE_peak_9_at_HIST1H3D_5end,CAGE_peak_9_at_HIST1H3E_5end,CAGE_peak_9_at_HIST1H3F_5end,CAGE_peak_9_at_HIST1H3G_5end,CAGE_peak_9_at_HIST1H3I_5end,CAGE_peak_9_at_HIST1H3J_5end
chr6	26199499	26199528	CAGE_peak_3_at_HIST1H3A_5end,CAGE_peak_3_at_HIST1H3B_5end,CAGE_peak_3_at_HIST1H3C_5end,CAGE_peak_3_at_HIST1H3D_5end,CAGE_peak_3_at_HIST1H3E_5end,CAGE_peak_3_at_HIST1H3F_5end,CAGE_peak_3_at_HIST1H3G_5end,CAGE_peak_3_at_HIST1H3I_5end,CAGE_peak_3_at_HIST1H3J_5end,CAGE_peak_4_at_HIST1H3H_5end
chr6	26225354	26225378	CAGE_peak_11_at_HIST1H3A_5end,CAGE_peak_11_at_HIST1H3B_5end,CAGE_peak_11_at_HIST1H3C_5end,CAGE_peak_11_at_HIST1H3D_5end,CAGE_peak_11_at_HIST1H3E_5end,CAGE_peak_11_at_HIST1H3F_5end,CAGE_peak_11_at_HIST1H3G_5end,CAGE_peak_11_at_HIST1H3I_5end,CAGE_peak_11_at_HIST1H3J_5end,CAGE_peak_12_at_HIST1H3H_5end
chr6	26250853	26250874	CAGE_peak_7_at_HIST1H3A_5end,CAGE_peak_7_at_HIST1H3B_5end,CAGE_peak_7_at_HIST1H3C_5end,CAGE_peak_7_at_HIST1H3D_5end,CAGE_peak_7_at_HIST1H3E_5end,CAGE_peak_7_at_HIST1H3F_5end,CAGE_peak_7_at_HIST1H3G_5end,CAGE_peak_7_at_HIST1H3I_5end,CAGE_peak_7_at_HIST1H3J_5end,CAGE_peak_8_at_HIST1H3H_5end
chr6	26271633	26271648	CAGE_peak_8_at_HIST1H3A_5end,CAGE_peak_8_at_HIST1H3B_5end,CAGE_peak_8_at_HIST1H3C_5end,CAGE_peak_8_at_HIST1H3D_5end,CAGE_peak_8_at_HIST1H3E_5end,CAGE_peak_8_at_HIST1H3F_5end,CAGE_peak_8_at_HIST1H3G_5end,CAGE_peak_8_at_HIST1H3I_5end,CAGE_peak_8_at_HIST1H3J_5end,CAGE_peak_9_at_HIST1H3H_5end
chr6	27777819	27777836	CAGE_peak_6_at_HIST1H3A_5end,CAGE_peak_6_at_HIST1H3B_5end,CAGE_peak_6_at_HIST1H3C_5end,CAGE_peak_6_at_HIST1H3D_5end,CAGE_peak_6_at_HIST1H3E_5end,CAGE_peak_6_at_HIST1H3F_5end,CAGE_peak_6_at_HIST1H3G_5end,CAGE_peak_6_at_HIST1H3I_5end,CAGE_peak_6_at_HIST1H3J_5end,CAGE_peak_7_at_HIST1H3H_5end
chr6	27840112	27840133	CAGE_peak_4_at_HIST1H3A_5end,CAGE_peak_4_at_HIST1H3B_5end,CAGE_peak_4_at_HIST1H3C_5end,CAGE_peak_4_at_HIST1H3D_5end,CAGE_peak_4_at_HIST1H3E_5end,CAGE_peak_4_at_HIST1H3F_5end,CAGE_peak_4_at_HIST1H3G_5end,CAGE_peak_4_at_HIST1H3I_5end,CAGE_peak_4_at_HIST1H3J_5end,CAGE_peak_5_at_HIST1H3H_5end
chr6	27858597	27858611	CAGE_peak_5_at_HIST1H3A_5end,CAGE_peak_5_at_HIST1H3B_5end,CAGE_peak_5_at_HIST1H3C_5end,CAGE_peak_5_at_HIST1H3D_5end,CAGE_peak_5_at_HIST1H3E_5end,CAGE_peak_5_at_HIST1H3F_5end,CAGE_peak_5_at_HIST1H3G_5end,CAGE_peak_5_at_HIST1H3I_5end,CAGE_peak_5_at_HIST1H3J_5end,CAGE_peak_6_at_HIST1H3H_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I026019	26019466	26035706	2.69	[{'connected_gene': 'HIST1H3A', 'score': 552.19}, {'connected_gene': 'HIST1H3B', 'score': 550.77}, {'connected_gene': 'HIST1H4B', 'score': 550.77}, {'connected_gene': 'HIST1H2AB', 'score': 550.44}, {'connected_gene': 'HIST1H4A', 'score': 550.44}, {'connected_gene': 'ABT1', 'score': 79.41}, {'connected_gene': 'HMGN4', 'score': 60.22}, {'connected_gene': 'BTN2A1', 'score': 59.84}, {'connected_gene': 'BTN2A3P', 'score': 52.04}, {'connected_gene': 'BTN2A2', 'score': 39.7}, {'connected_gene': 'ENSG00000272462', 'score': 31.49}, {'connected_gene': 'BTN3A2', 'score': 27.46}, {'connected_gene': 'NUP50P2', 'score': 22.38}, {'connected_gene': 'BTN3A1', 'score': 22.22}, {'connected_gene': 'HIST1H1C', 'score': 21.11}, {'connected_gene': 'BTN3A3', 'score': 19.26}, {'connected_gene': 'ZNF322', 'score': 12.22}, {'connected_gene': 'HIST1H2APS5', 'score': 11.61}, {'connected_gene': 'LINC00240', 'score': 10.54}, {'connected_gene': 'HIST1H1D', 'score': 10.37}, {'connected_gene': 'HIST1H4C', 'score': 10.02}, {'connected_gene': 'TRIM38', 'score': 9.12}, {'connected_gene': 'HFE', 'score': 7.17}, {'connected_gene': 'HIST1H1E', 'score': 2.13}, {'connected_gene': 'HIST1H2BD', 'score': 1.38}, {'connected_gene': 'GC06P026025', 'score': 0.44}, {'connected_gene': 'GC06P026024', 'score': 0.44}, {'connected_gene': 'GC06M026034', 'score': 0.44}, {'connected_gene': 'GC06P025915', 'score': 0.14}]
chr6	GH06I025535	25535530	25535570	0.95	[{'connected_gene': 'LOC101928663', 'score': 11.28}, {'connected_gene': 'RPL21P68', 'score': 11.28}, {'connected_gene': 'CARMIL1', 'score': 10.5}, {'connected_gene': 'LOC100533655', 'score': 10.05}, {'connected_gene': 'CMAHP', 'score': 10.04}, {'connected_gene': 'HIST1H4A', 'score': 4.62}, {'connected_gene': 'HIST1H3B', 'score': 3.54}, {'connected_gene': 'HIST1H4B', 'score': 3.3}, {'connected_gene': 'HIST1H2AB', 'score': 2.88}, {'connected_gene': 'HIST1H3A', 'score': 1.89}, {'connected_gene': 'GC06M025494', 'score': 0.28}, {'connected_gene': 'GC06M025592', 'score': 0.22}]