PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000271532	[[157543538, 157545400], [157545488, 157545520], [157548263, 157548332], [157548559, 157548642], [157550110, 157550138], [157551320, 157551434], [157555957, 157556245], [157557065, 157557350], [157557654, 157557909], [157558993, 157559248], [157566117, 157566138], [157567703, 157567870]]	[[157545313, 157545400], [157545488, 157545520], [157548263, 157548332], [157548559, 157548642], [157550110, 157550138], [157551320, 157551434], [157555957, 157556245], [157557065, 157557350], [157557654, 157557909], [157558993, 157559248], [157566117, 157566138], [157567703, 157567734]]
ENST00000448509	[[157544610, 157545400], [157545488, 157545520], [157548263, 157548642], [157550110, 157550138], [157551320, 157551434], [157555957, 157556245], [157557065, 157557350], [157557654, 157557909], [157558993, 157559041]]	None
ENST00000479869	[[157545358, 157545400], [157545488, 157545520], [157548263, 157548332], [157548559, 157548642], [157550110, 157550327]]	None
NM_031282	[[157543538, 157545400], [157545488, 157545520], [157548263, 157548332], [157548559, 157548642], [157550110, 157550138], [157551320, 157551434], [157555957, 157556245], [157557065, 157557350], [157557654, 157557909], [157558993, 157559248], [157566117, 157566138], [157567703, 157567870]]	[[157545313, 157545400], [157545488, 157545520], [157548263, 157548332], [157548559, 157548642], [157550110, 157550138], [157551320, 157551434], [157555957, 157556245], [157557065, 157557350], [157557654, 157557909], [157558993, 157559248], [157566117, 157566138], [157567703, 157567734]]

Promoter

Chrom	Start	End	Description
chr1	157567826	157567835	CAGE_peak_2_at_FCRL4_5end
chr1	157567868	157567880	CAGE_peak_1_at_FCRL4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I157598	157598075	157598134	0.87	[{'connected_gene': 'FCRL4', 'score': 550.77}, {'connected_gene': 'ENSG00000236731', 'score': 0.29}]
chr1	GH01I157562	157562522	157562827	0.63	[{'connected_gene': 'FCRL5', 'score': 40.03}, {'connected_gene': 'FCRL4', 'score': 0.28}]
chr1	GH01I157552	157552070	157553060	1.18	[{'connected_gene': 'FCRL5', 'score': 585.43}, {'connected_gene': 'FCRL4', 'score': 0.25}, {'connected_gene': 'GC01P157412', 'score': 0.11}]
chr1	GH01I157566	157566125	157567786	0.62	[{'connected_gene': 'FCRL5', 'score': 36.21}, {'connected_gene': 'ENSG00000227217', 'score': 10.3}, {'connected_gene': 'FCRL3', 'score': 10.29}, {'connected_gene': 'FCRL4', 'score': 0.29}]
chr1	GH01I157595	157595491	157595580	0.75	[{'connected_gene': 'FCRL5', 'score': 11.25}, {'connected_gene': 'ENSG00000227217', 'score': 10.82}, {'connected_gene': 'FCRL3', 'score': 10.81}, {'connected_gene': 'FCRL2', 'score': 10.06}, {'connected_gene': 'FCRL1', 'score': 9.52}, {'connected_gene': 'FCRL4', 'score': 0.77}]