PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_003513	[[26033319, 26033796]]	[[26033403, 26033796]]

Promoter

Chrom	Start	End	Description
chr6	26033837	26033852	CAGE_peak_1_at_HIST1H2AB_5end,CAGE_peak_2_at_HIST1H2AE_5end
chr6	26217159	26217170	CAGE_peak_2_at_HIST1H2AB_5end,CAGE_peak_3_at_HIST1H2AE_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I026019	26019466	26035706	2.69	[{'connected_gene': 'HIST1H3A', 'score': 552.19}, {'connected_gene': 'HIST1H3B', 'score': 550.77}, {'connected_gene': 'HIST1H4B', 'score': 550.77}, {'connected_gene': 'HIST1H2AB', 'score': 550.44}, {'connected_gene': 'HIST1H4A', 'score': 550.44}, {'connected_gene': 'ABT1', 'score': 79.41}, {'connected_gene': 'HMGN4', 'score': 60.22}, {'connected_gene': 'BTN2A1', 'score': 59.84}, {'connected_gene': 'BTN2A3P', 'score': 52.04}, {'connected_gene': 'BTN2A2', 'score': 39.7}, {'connected_gene': 'ENSG00000272462', 'score': 31.49}, {'connected_gene': 'BTN3A2', 'score': 27.46}, {'connected_gene': 'NUP50P2', 'score': 22.38}, {'connected_gene': 'BTN3A1', 'score': 22.22}, {'connected_gene': 'HIST1H1C', 'score': 21.11}, {'connected_gene': 'BTN3A3', 'score': 19.26}, {'connected_gene': 'ZNF322', 'score': 12.22}, {'connected_gene': 'HIST1H2APS5', 'score': 11.61}, {'connected_gene': 'LINC00240', 'score': 10.54}, {'connected_gene': 'HIST1H1D', 'score': 10.37}, {'connected_gene': 'HIST1H4C', 'score': 10.02}, {'connected_gene': 'TRIM38', 'score': 9.12}, {'connected_gene': 'HFE', 'score': 7.17}, {'connected_gene': 'HIST1H1E', 'score': 2.13}, {'connected_gene': 'HIST1H2BD', 'score': 1.38}, {'connected_gene': 'GC06P026025', 'score': 0.44}, {'connected_gene': 'GC06P026024', 'score': 0.44}, {'connected_gene': 'GC06M026034', 'score': 0.44}, {'connected_gene': 'GC06P025915', 'score': 0.14}]
chr6	GH06I026120	26120087	26127861	2.85	[{'connected_gene': 'HIST1H2AC', 'score': 552.85}, {'connected_gene': 'PIR44445', 'score': 550.77}, {'connected_gene': 'HIST1H2BC', 'score': 550.77}, {'connected_gene': 'PIR32750', 'score': 550.77}, {'connected_gene': 'PIR33095', 'score': 550.77}, {'connected_gene': 'ABT1', 'score': 61.93}, {'connected_gene': 'HMGN4', 'score': 48.11}, {'connected_gene': 'BTN2A3P', 'score': 41.78}, {'connected_gene': 'BTN2A1', 'score': 40.03}, {'connected_gene': 'BTN2A2', 'score': 31.27}, {'connected_gene': 'ENSG00000272462', 'score': 28.42}, {'connected_gene': 'NUP50P2', 'score': 22.39}, {'connected_gene': 'BTN3A1', 'score': 13.66}, {'connected_gene': 'BTN3A3', 'score': 10.54}, {'connected_gene': 'HFE', 'score': 9.93}, {'connected_gene': 'HIST1H1D', 'score': 9.92}, {'connected_gene': 'BTN3A2', 'score': 8.7}, {'connected_gene': 'HIST1H1C', 'score': 7.05}, {'connected_gene': 'HIST1H2APS5', 'score': 6.41}, {'connected_gene': 'HIST1H4F', 'score': 2.02}, {'connected_gene': 'HIST1H4E', 'score': 1.89}, {'connected_gene': 'HIST1H1E', 'score': 1.78}, {'connected_gene': 'HIST1H4A', 'score': 1.75}, {'connected_gene': 'HIST1H2BH', 'score': 1.57}, {'connected_gene': 'HIST1H3C', 'score': 1.57}, {'connected_gene': 'HIST1H4B', 'score': 1.49}, {'connected_gene': 'HIST1H2AE', 'score': 1.38}, {'connected_gene': 'HIST1H3F', 'score': 1.36}, {'connected_gene': 'HIST1H2AB', 'score': 1.31}, {'connected_gene': 'HIST1H3A', 'score': 1.3}, {'connected_gene': 'HIST1H4H', 'score': 1.28}, {'connected_gene': 'GC06P025915', 'score': 0.08}]
chr6	GH06I025535	25535530	25535570	0.95	[{'connected_gene': 'LOC101928663', 'score': 11.28}, {'connected_gene': 'RPL21P68', 'score': 11.28}, {'connected_gene': 'CARMIL1', 'score': 10.5}, {'connected_gene': 'LOC100533655', 'score': 10.05}, {'connected_gene': 'CMAHP', 'score': 10.04}, {'connected_gene': 'HIST1H4A', 'score': 4.62}, {'connected_gene': 'HIST1H3B', 'score': 3.54}, {'connected_gene': 'HIST1H4B', 'score': 3.3}, {'connected_gene': 'HIST1H2AB', 'score': 2.88}, {'connected_gene': 'HIST1H3A', 'score': 1.89}, {'connected_gene': 'GC06M025494', 'score': 0.28}, {'connected_gene': 'GC06M025592', 'score': 0.22}]