PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000299155	[[103388992, 103389068], [103390047, 103390166], [103390271, 103390316], [103394762, 103394850], [103395094, 103395312], [103395457, 103395595], [103395764, 103395873], [103395991, 103396074], [103396260, 103396423], [103396501, 103396664], [103396742, 103396830], [103396912, 103397529]]	[[103389025, 103389068], [103390047, 103390166], [103390271, 103390316], [103394762, 103394850], [103395094, 103395312], [103395457, 103395595], [103395764, 103395873], [103395991, 103396074], [103396260, 103396423], [103396501, 103396664], [103396742, 103396830], [103396912, 103397017]]
ENST00000541086	[[103389258, 103390166], [103390271, 103390316], [103394762, 103394850], [103395094, 103395312], [103395457, 103395595], [103395764, 103395873], [103395991, 103396074], [103396260, 103396423], [103396501, 103396664], [103396742, 103396830], [103396912, 103397178]]	None
ENST00000558590	[[103394981, 103395595], [103395764, 103395873], [103395991, 103396074], [103396260, 103396423], [103396501, 103396664], [103396742, 103396830], [103397924, 103398751], [103398940, 103399081], [103399349, 103399933]]	None
ENST00000559442	[[103395028, 103395312], [103395457, 103395595], [103395764, 103395812]]	None
ENST00000559525	[[103395145, 103395279], [103395457, 103395595], [103395764, 103395812]]	[[103395145, 103395279], [103395457, 103395595], [103395764, 103395812]]
ENST00000559789	[[103395166, 103395292], [103396501, 103396664], [103396742, 103396830], [103396912, 103396928]]	[[103395166, 103395292], [103396501, 103396664], [103396742, 103396830], [103396912, 103396928]]
ENST00000559507	[[103396443, 103396664], [103396742, 103396956]]	None
NM_030943	[[103388992, 103389068], [103390047, 103390166], [103390271, 103390316], [103394762, 103394850], [103395094, 103395312], [103395457, 103395595], [103395764, 103395873], [103395991, 103396074], [103396260, 103396423], [103396501, 103396664], [103396742, 103396830], [103396912, 103397179]]	[[103389025, 103389068], [103390047, 103390166], [103390271, 103390316], [103394762, 103394850], [103395094, 103395312], [103395457, 103395595], [103395764, 103395873], [103395991, 103396074], [103396260, 103396423], [103396501, 103396664], [103396742, 103396830], [103396912, 103397017]]

Promoter

Chrom	Start	End	Description
chr14	103388976	103389025	CAGE_peak_1_at_AMN_5end
chr14	103389258	103389260	CAGE_peak_6_at_AMN_5end
chr14	103389369	103389380	CAGE_peak_3_at_AMN_5end
chr14	103389412	103389423	CAGE_peak_4_at_AMN_5end
chr14	103394963	103395021	CAGE_peak_2_at_AMN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I102951	102951184	102952702	0.51	[{'connected_gene': 'AMN', 'score': 4.89}, {'connected_gene': 'GC14P103297', 'score': 0.77}, {'connected_gene': 'PIR49144', 'score': 0.25}, {'connected_gene': 'CDC42BPB', 'score': 0.14}]
chr14	GH14I102948	102948709	102950561	0.92	[{'connected_gene': 'AMN', 'score': 4.92}, {'connected_gene': 'GC14P103297', 'score': 0.77}, {'connected_gene': 'PIR49144', 'score': 0.25}, {'connected_gene': 'CDC42BPB', 'score': 0.14}]
chr14	GH14I102922	102922092	102929229	2.32	[{'connected_gene': 'AMN', 'score': 556.08}, {'connected_gene': 'ENSG00000269940', 'score': 5.23}, {'connected_gene': 'ENSG00000259515', 'score': 5.19}]
chr14	GH14I102913	102913424	102914259	0.43	[{'connected_gene': 'AMN', 'score': 0.44}, {'connected_gene': 'PIR62674', 'score': 0.44}]
chr14	GH14I102916	102916684	102916833	0.2	[{'connected_gene': 'AMN', 'score': 0.44}, {'connected_gene': 'PIR62674', 'score': 0.44}]
chr14	GH14I102917	102917944	102918133	0.65	[{'connected_gene': 'AMN', 'score': 0.77}, {'connected_gene': 'PIR62674', 'score': 0.39}]
chr14	GH14I102535	102535942	102537247	0.77	[{'connected_gene': 'CINP', 'score': 15.32}, {'connected_gene': 'RCOR1', 'score': 11.89}, {'connected_gene': 'TECPR2', 'score': 10.49}, {'connected_gene': 'AMN', 'score': 5.7}, {'connected_gene': 'MOK', 'score': 4.75}, {'connected_gene': 'MIR4309', 'score': 0.77}, {'connected_gene': 'LOC105370680', 'score': 0.37}]
chr14	GH14I102507	102507423	102512293	2.41	[{'connected_gene': 'ANKRD9', 'score': 574.01}, {'connected_gene': 'LOC105370679', 'score': 550.77}, {'connected_gene': 'RCOR1', 'score': 10.85}, {'connected_gene': 'TECPR2', 'score': 10.38}, {'connected_gene': 'CINP', 'score': 10.38}, {'connected_gene': 'ZNF839', 'score': 6.3}, {'connected_gene': 'AMN', 'score': 1.73}]
chr14	GH14I102932	102932387	102932869	0.2	[{'connected_gene': 'ENSG00000259515', 'score': 550.77}, {'connected_gene': 'AMN', 'score': 0.39}, {'connected_gene': 'CDC42BPB', 'score': 0.13}]
chr14	GH14I102909	102909345	102909892	0.2	[{'connected_gene': 'PIR62674', 'score': 0.77}, {'connected_gene': 'AMN', 'score': 0.39}, {'connected_gene': 'TRAF3', 'score': 0.12}]
chr14	GH14I102930	102930561	102931957	0.84	[{'connected_gene': 'ENSG00000259515', 'score': 0.77}, {'connected_gene': 'AMN', 'score': 0.44}]
chr14	GH14I102931	102930364	102930513	0.58	[{'connected_gene': 'ENSG00000259515', 'score': 0.77}, {'connected_gene': 'AMN', 'score': 0.44}]
chr14	GH14I102929	102929489	102930064	0.66	[{'connected_gene': 'ENSG00000259515', 'score': 0.77}, {'connected_gene': 'AMN', 'score': 0.44}]
chr14	GH14I103007	103007269	103012202	1.03	[{'connected_gene': 'GC14M102996', 'score': 550.77}, {'connected_gene': 'TRAF3', 'score': 10.37}, {'connected_gene': 'AMN', 'score': 6.75}, {'connected_gene': 'ENSG00000269940', 'score': 4.65}, {'connected_gene': 'APOPT1', 'score': 4.17}, {'connected_gene': 'PIR49144', 'score': 0.39}, {'connected_gene': 'CDC42BPB', 'score': 0.25}]