PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000401466	[[120436742, 120436801], [120438407, 120439694]]	[[120438429, 120439365]]
ENST00000424086	[[120436742, 120437193], [120438407, 120439694]]	[[120438429, 120439365]]
ENST00000272521	[[120436745, 120436852], [120438407, 120439694]]	[[120438429, 120439365]]
ENST00000445518	[[120436766, 120437193], [120438407, 120438771]]	[[120438429, 120438771]]
ENST00000496203	[[120436778, 120436852], [120443233, 120444040]]	None
ENST00000409951	[[120436778, 120436852], [120438407, 120438699], [120443233, 120444083]]	[[120438429, 120438699], [120443233, 120443290]]
NM_001105199	[[120436742, 120436801], [120438407, 120439694]]	[[120438429, 120439365]]
NM_030577	[[120436742, 120436852], [120438407, 120439694]]	[[120438429, 120439365]]
NM_001105198	[[120436742, 120437193], [120438407, 120439694]]	[[120438429, 120439365]]

Promoter

Chrom	Start	End	Description
chr2	120436733	120436759	CAGE_peak_2_at_TMEM177_5end
chr2	120436760	120436793	CAGE_peak_1_at_TMEM177_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I119641	119641685	119641834	0.76	[{'connected_gene': 'TMEM177', 'score': 6.3}, {'connected_gene': 'CFAP221', 'score': 0.15}]
chr2	GH02I119677	119677922	119680191	2	[{'connected_gene': 'TMEM177', 'score': 565.24}, {'connected_gene': 'CFAP221', 'score': 0.12}]
chr2	GH02I119657	119657401	119657801	0.4	[{'connected_gene': 'TMEM177', 'score': 8.21}, {'connected_gene': 'CFAP221', 'score': 0.14}]
chr2	GH02I119682	119682670	119685009	0.63	[{'connected_gene': 'TMEM177', 'score': 14.3}, {'connected_gene': 'PIR62578', 'score': 0.39}]
chr2	GH02I119554	119554065	119554214	0.63	[{'connected_gene': 'SCTR', 'score': 11.61}, {'connected_gene': 'CFAP221', 'score': 0.44}, {'connected_gene': 'TMEM177', 'score': 0.13}]
chr2	GH02I119495	119495129	119496256	0.31	[{'connected_gene': 'SCTR', 'score': 28.29}, {'connected_gene': 'TMEM37', 'score': 11.14}, {'connected_gene': 'CFAP221', 'score': 10.46}, {'connected_gene': 'TMEM177', 'score': 4.72}, {'connected_gene': 'LOC107105282', 'score': 0.37}]
chr2	GH02I119644	119644991	119645036	0.22	[{'connected_gene': 'PTPN4', 'score': 1.47}, {'connected_gene': 'TMEM177', 'score': 0.29}, {'connected_gene': 'CFAP221', 'score': 0.15}]
chr2	GH02I119820	119820200	119820601	0.76	[{'connected_gene': 'PTPN4', 'score': 12.03}, {'connected_gene': 'EPB41L5', 'score': 11.28}, {'connected_gene': 'TMEM177', 'score': 9.08}, {'connected_gene': 'LOC101927764', 'score': 0.22}, {'connected_gene': 'GC02P119982', 'score': 0.1}]
chr2	GH02I119927	119927106	119930913	0.2	[{'connected_gene': 'EPB41L5', 'score': 10.03}, {'connected_gene': 'TMEM177', 'score': 4.81}, {'connected_gene': 'GC02P119982', 'score': 0.23}, {'connected_gene': 'LOC101927764', 'score': 0.1}, {'connected_gene': 'PTPN4', 'score': 0.1}]
chr2	GH02I119598	119598165	119599453	0.2	[{'connected_gene': 'CFAP221', 'score': 0.23}, {'connected_gene': 'TMEM177', 'score': 0.18}]
chr2	GH02I119579	119579625	119579754	0.56	[{'connected_gene': 'CFAP221', 'score': 11.54}, {'connected_gene': 'TMEM177', 'score': 0.15}]
chr2	GH02I119541	119541404	119552176	2.19	[{'connected_gene': 'CFAP221', 'score': 550.77}, {'connected_gene': 'SCTR', 'score': 15.14}, {'connected_gene': 'TMEM185B', 'score': 10.18}, {'connected_gene': 'TMEM177', 'score': 5.17}, {'connected_gene': 'EPB41L5', 'score': 4.5}]
chr2	GH02I119112	119112581	119113618	0.31	[{'connected_gene': 'C1QL2', 'score': 12.08}, {'connected_gene': 'TMEM177', 'score': 5.09}, {'connected_gene': 'LOC105373580', 'score': 0.1}]
chr2	GH02I119694	119694329	119696371	0.95	[{'connected_gene': 'PIR62578', 'score': 550.77}, {'connected_gene': 'PTPN4', 'score': 10.74}, {'connected_gene': 'TMEM177', 'score': 0.37}]