PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000393094	[[107879458, 107880098], [107904527, 107904637], [107916996, 107917096], [107920616, 107920793], [107923386, 107923528], [107925373, 107925519], [107925601, 107925682], [107940822, 107940916], [107943058, 107943189], [107944116, 107944224], [107948902, 107948967], [107959253, 107959386], [107960218, 107960350], [107965117, 107965241], [107965538, 107965714], [107966256, 107966418], [107968362, 107968481], [107969132, 107969256], [107974916, 107978503]]	[[107880074, 107880098], [107904527, 107904637], [107916996, 107917096], [107920616, 107920793], [107923386, 107923528], [107925373, 107925519], [107925601, 107925682], [107940822, 107940916], [107943058, 107943189], [107944116, 107944224], [107948902, 107948967], [107959253, 107959386], [107960218, 107960350], [107965117, 107965241], [107965538, 107965714], [107966256, 107966418], [107968362, 107968481], [107969132, 107969256], [107974916, 107975111]]
ENST00000532064	[[107879645, 107880098], [107904527, 107904637], [107920616, 107920793], [107923386, 107923528], [107925373, 107925519], [107925601, 107925682]]	[[107880074, 107880098], [107904527, 107904637], [107920616, 107920626]]
ENST00000526303	[[107879681, 107880098], [107904527, 107904637], [107916996, 107917220]]	None
ENST00000531427	[[107879985, 107880098], [107904527, 107904637], [107916996, 107917096], [107920616, 107920793], [107923386, 107923528], [107925373, 107925519], [107925601, 107925682], [107940822, 107940916], [107943058, 107943189], [107944116, 107944224], [107948902, 107948967], [107959253, 107959386], [107960218, 107960350], [107965117, 107965241], [107965538, 107965714], [107966256, 107966418], [107968362, 107968481], [107969132, 107969256], [107974916, 107975629], [107976933, 107977579]]	[[107880074, 107880098], [107904527, 107904637], [107916996, 107917096], [107920616, 107920793], [107923386, 107923528], [107925373, 107925519], [107925601, 107925682], [107940822, 107940916], [107943058, 107943189], [107944116, 107944224], [107948902, 107948967], [107959253, 107959386], [107960218, 107960350], [107965117, 107965241], [107965538, 107965714], [107966256, 107966418], [107968362, 107968481], [107969132, 107969256], [107974916, 107975111]]
ENST00000532782	[[107916996, 107917096], [107923386, 107923528], [107925373, 107925519]]	[[107916996, 107917096], [107923386, 107923528], [107925373, 107925519]]
ENST00000531843	[[107944116, 107944224], [107944526, 107944793]]	None
NM_003478	[[107879407, 107880098], [107904527, 107904637], [107916996, 107917096], [107920616, 107920793], [107923386, 107923528], [107925373, 107925519], [107925601, 107925682], [107940822, 107940916], [107943058, 107943189], [107944116, 107944224], [107948902, 107948967], [107959253, 107959386], [107960218, 107960350], [107965117, 107965241], [107965538, 107965714], [107966256, 107966418], [107968362, 107968481], [107969132, 107969256], [107974916, 107978488]]	[[107880074, 107880098], [107904527, 107904637], [107916996, 107917096], [107920616, 107920793], [107923386, 107923528], [107925373, 107925519], [107925601, 107925682], [107940822, 107940916], [107943058, 107943189], [107944116, 107944224], [107948902, 107948967], [107959253, 107959386], [107960218, 107960350], [107965117, 107965241], [107965538, 107965714], [107966256, 107966418], [107968362, 107968481], [107969132, 107969256], [107974916, 107975111]]

Promoter

Chrom	Start	End	Description
chr11	107879607	107879702	CAGE_peak_1_at_CUL5_5end
chr11	107880037	107880074	CAGE_peak_2_at_CUL5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I107988	107988410	107988782	0.57	[{'connected_gene': 'CUL5', 'score': 12.13}, {'connected_gene': 'RAB39A', 'score': 0.21}]
chr11	GH11I107989	107988947	107989005	0.27	[{'connected_gene': 'CUL5', 'score': 0.37}, {'connected_gene': 'RAB39A', 'score': 0.21}]
chr11	GH11I107975	107975432	107975450	0.24	[{'connected_gene': 'CUL5', 'score': 0.29}, {'connected_gene': 'RAB39A', 'score': 0.25}]
chr11	GH11I108008	108008195	108011310	2.28	[{'connected_gene': 'CUL5', 'score': 550.77}, {'connected_gene': 'NPAT', 'score': 23.73}, {'connected_gene': 'CWF19L2', 'score': 13.15}, {'connected_gene': 'ALKBH8', 'score': 12.38}, {'connected_gene': 'DDX10', 'score': 11.58}, {'connected_gene': 'KDELC2', 'score': 10.92}, {'connected_gene': 'ACAT1', 'score': 9.73}, {'connected_gene': 'GC11P108085', 'score': 0.18}]
chr11	GH11I108035	108035815	108035964	0.31	[{'connected_gene': 'CUL5', 'score': 0.31}, {'connected_gene': 'GC11P108085', 'score': 0.25}]
chr11	GH11I108020	108020035	108020184	0.79	[{'connected_gene': 'CUL5', 'score': 0.39}, {'connected_gene': 'GC11P108085', 'score': 0.21}]
chr11	GH11I107991	107991797	107992313	0.2	[{'connected_gene': 'ACAT1', 'score': 11.47}, {'connected_gene': 'CUL5', 'score': 0.37}, {'connected_gene': 'RAB39A', 'score': 0.21}]
chr11	GH11I108025	108025601	108025800	0.52	[{'connected_gene': 'ACAT1', 'score': 10.46}, {'connected_gene': 'ENSG00000255467', 'score': 10.46}, {'connected_gene': 'CUL5', 'score': 0.37}, {'connected_gene': 'GC11P108085', 'score': 0.22}]
chr11	GH11I108092	108092986	108094077	0.56	[{'connected_gene': 'ACAT1', 'score': 21.49}, {'connected_gene': 'ENSG00000255467', 'score': 12.0}, {'connected_gene': 'ENSG00000200855', 'score': 0.44}, {'connected_gene': 'CUL5', 'score': 0.18}]
chr11	GH11I108069	108069614	108070603	0.49	[{'connected_gene': 'ACAT1', 'score': 24.24}, {'connected_gene': 'ENSG00000255467', 'score': 11.25}, {'connected_gene': 'GC11P108085', 'score': 0.39}, {'connected_gene': 'CUL5', 'score': 0.21}]
chr11	GH11I108013	108013401	108013600	0.38	[{'connected_gene': 'ACAT1', 'score': 5.62}, {'connected_gene': 'CUL5', 'score': 0.77}, {'connected_gene': 'GC11P108085', 'score': 0.19}]
chr11	GH11I107948	107948097	107948905	0.31	[{'connected_gene': 'ACAT1', 'score': 4.24}, {'connected_gene': 'RAB39A', 'score': 0.34}, {'connected_gene': 'CUL5', 'score': 0.21}]
chr11	GH11I107999	107999915	108000064	0.62	[{'connected_gene': 'ACAT1', 'score': 10.66}, {'connected_gene': 'ENSG00000255467', 'score': 10.66}, {'connected_gene': 'DDX10', 'score': 10.5}, {'connected_gene': 'CUL5', 'score': 0.44}, {'connected_gene': 'RAB39A', 'score': 0.19}]
chr11	GH11I107957	107957032	107957800	0.9	[{'connected_gene': 'SLN', 'score': 4.36}, {'connected_gene': 'ELMOD1', 'score': 4.15}, {'connected_gene': 'RAB39A', 'score': 0.31}, {'connected_gene': 'CUL5', 'score': 0.23}]
chr11	GH11I107929	107929875	107930036	0.46	[{'connected_gene': 'RAB39A', 'score': 550.77}, {'connected_gene': 'SLC35F2', 'score': 550.77}, {'connected_gene': 'CUL5', 'score': 0.18}]
chr11	GH11I107927	107927601	107929601	1.96	[{'connected_gene': 'SLC35F2', 'score': 556.71}, {'connected_gene': 'RAB39A', 'score': 550.77}, {'connected_gene': 'NPAT', 'score': 34.06}, {'connected_gene': 'CWF19L2', 'score': 19.15}, {'connected_gene': 'CUL5', 'score': 10.34}, {'connected_gene': 'ALKBH8', 'score': 10.02}, {'connected_gene': 'DDX10', 'score': 9.91}, {'connected_gene': 'ASS1P13', 'score': 5.39}]