PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000361837	[[2510080, 2510171], [2510283, 2510382], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514230], [2514522, 2514964]]	[[2510145, 2510171], [2510283, 2510382], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514230], [2514522, 2514669]]
ENST00000569496	[[2510086, 2510171], [2510283, 2510382], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514927]]	[[2510145, 2510171], [2510283, 2510382], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514293]]
ENST00000567489	[[2510094, 2510171], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512724]]	[[2510145, 2510171], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512724]]
ENST00000565537	[[2510102, 2510171], [2510283, 2510758]]	None
ENST00000569665	[[2510118, 2510171], [2510283, 2510382], [2510623, 2511053]]	None
ENST00000569994	[[2510118, 2510171], [2510283, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514963]]	None
ENST00000563531	[[2510134, 2510171], [2510283, 2510382], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514928]]	[[2510145, 2510171], [2510283, 2510382], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514293]]
ENST00000569664	[[2510145, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512169]]	None
ENST00000483320	[[2510145, 2510382], [2510623, 2510694], [2510816, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514230], [2514522, 2514964]]	[[2511121, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514230], [2514522, 2514669]]
ENST00000562253	[[2510157, 2510382], [2510623, 2510694], [2510816, 2511450]]	None
ENST00000568753	[[2510476, 2510694], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514112]]	[[2512228, 2512240], [2512415, 2512527], [2512631, 2512733], [2514039, 2514112]]
ENST00000565716	[[2510937, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512527], [2512631, 2512733], [2514154, 2514964]]	[[2510937, 2511225], [2511747, 2511801], [2512149, 2512240], [2512415, 2512497]]
ENST00000566580	[[2511547, 2511801], [2512149, 2512240], [2512415, 2512433]]	None

Promoter

Chrom	Start	End	Description
chr16	2510094	2510152	CAGE_peak_1_at_C16orf59_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I002460	2459020	2459169	0.64	[{'connected_gene': 'TEDC2', 'score': 550.77}, {'connected_gene': 'PIR54822', 'score': 550.77}, {'connected_gene': 'LOC105371050', 'score': 550.77}, {'connected_gene': 'CCNF', 'score': 12.99}, {'connected_gene': 'ABCA17P', 'score': 11.47}, {'connected_gene': 'ABCA3', 'score': 11.47}]
chr16	GH16I002459	2459386	2460921	1.98	[{'connected_gene': 'TEDC2', 'score': 550.77}, {'connected_gene': 'LOC105371050', 'score': 550.77}, {'connected_gene': 'SRRM2', 'score': 32.54}, {'connected_gene': 'ZNF263', 'score': 30.53}, {'connected_gene': 'ENSG00000255513', 'score': 29.49}, {'connected_gene': 'SNORA64', 'score': 28.63}, {'connected_gene': 'LOC105371055', 'score': 27.67}, {'connected_gene': 'TELO2', 'score': 26.93}, {'connected_gene': 'ENSG00000260954', 'score': 25.08}, {'connected_gene': 'THOC6', 'score': 22.31}, {'connected_gene': 'E4F1', 'score': 21.36}, {'connected_gene': 'CRAMP1', 'score': 21.1}, {'connected_gene': 'ZNF598', 'score': 20.07}, {'connected_gene': 'SPSB3', 'score': 13.79}, {'connected_gene': 'CCNF', 'score': 12.97}, {'connected_gene': 'SNORD60', 'score': 12.79}, {'connected_gene': 'TRAF7', 'score': 12.6}, {'connected_gene': 'ERVK13-1', 'score': 12.25}, {'connected_gene': 'NUBP2', 'score': 12.09}, {'connected_gene': 'ABCA3', 'score': 11.47}, {'connected_gene': 'ABCA17P', 'score': 11.47}, {'connected_gene': 'ZNF597', 'score': 10.73}, {'connected_gene': 'TSC2', 'score': 10.73}, {'connected_gene': 'LOC652276', 'score': 10.21}, {'connected_gene': 'GC16M002463', 'score': 0.77}]
chr16	GH16I002467	2467006	2472383	2.47	[{'connected_gene': 'NTN3', 'score': 559.11}, {'connected_gene': 'LOC729652', 'score': 550.77}, {'connected_gene': 'ZNF75A', 'score': 19.36}, {'connected_gene': 'ZNF213-AS1', 'score': 12.98}, {'connected_gene': 'ERVK13-1', 'score': 12.73}, {'connected_gene': 'LOC106660606', 'score': 12.23}, {'connected_gene': 'NME3', 'score': 12.2}, {'connected_gene': 'MTCO1P28', 'score': 11.35}, {'connected_gene': 'ENSG00000260646', 'score': 11.12}, {'connected_gene': 'SNORD60', 'score': 10.37}, {'connected_gene': 'SNHG19', 'score': 10.16}, {'connected_gene': 'ZNF205', 'score': 10.01}, {'connected_gene': 'TSC2', 'score': 10.0}, {'connected_gene': 'RAB26', 'score': 7.89}, {'connected_gene': 'TBC1D24', 'score': 4.99}, {'connected_gene': 'TEDC2', 'score': 3.86}, {'connected_gene': 'E4F1', 'score': 2.38}, {'connected_gene': 'CCNF', 'score': 1.46}, {'connected_gene': 'SRRM2', 'score': 1.38}]
chr16	GH16I002463	2463612	2466095	0.73	[{'connected_gene': 'MIR6768', 'score': 550.77}, {'connected_gene': 'GC16M002463', 'score': 550.77}, {'connected_gene': 'LOC652276', 'score': 9.31}, {'connected_gene': 'TEDC2', 'score': 0.77}, {'connected_gene': 'LOC729652', 'score': 0.77}]