PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000311277	[[156263809, 156269057], [156273747, 156273880], [156274063, 156274209], [156274330, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297066], [156297922, 156298122]]	[[156268934, 156269057], [156273747, 156273880], [156274063, 156274209], [156274330, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297002]]
ENST00000515654	[[156268892, 156269057], [156273747, 156273880], [156274063, 156274209], [156274330, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281495], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297066], [156297922, 156297988]]	[[156268934, 156269057], [156273747, 156273880], [156274063, 156274209], [156274330, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281495], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297002]]
ENST00000503466	[[156270822, 156271391], [156273747, 156273838]]	[[156271382, 156271391], [156273747, 156273838]]
ENST00000424373	[[156273835, 156273880], [156274063, 156274209], [156274330, 156274492], [156276222, 156276312], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297066], [156297922, 156298122]]	[[156276302, 156276312], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297002]]
ENST00000433024	[[156274404, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289961], [156294287, 156294608], [156296088, 156296173], [156296927, 156297066], [156297922, 156298037]]	[[156274404, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289961], [156294287, 156294608], [156296088, 156296173], [156296927, 156297002]]
ENST00000379248	[[156289317, 156289961], [156294287, 156294608], [156296088, 156296173], [156297922, 156298037]]	[[156289653, 156289961], [156294287, 156294552]]
ENST00000481250	[[156294147, 156294608], [156296088, 156296173], [156296927, 156297066], [156297922, 156297965]]	None
ENST00000450097	[[156296155, 156296173], [156296927, 156297066], [156297527, 156297930]]	[[156296155, 156296173], [156296927, 156297002]]
NM_001039580	[[156263809, 156269057], [156273747, 156273880], [156274063, 156274209], [156274330, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297066], [156297922, 156298122]]	[[156268934, 156269057], [156273747, 156273880], [156274063, 156274209], [156274330, 156274492], [156276222, 156276312], [156276867, 156277036], [156278600, 156278671], [156281319, 156281567], [156283199, 156283293], [156289737, 156289964], [156294287, 156294608], [156296088, 156296173], [156296927, 156297002]]

Promoter

Chrom	Start	End	Description
chr4	156297919	156297937	CAGE_peak_3_at_MAP9_5end
chr4	156297949	156297996	CAGE_peak_1_at_MAP9_5end
chr4	156298028	156298039	CAGE_peak_5_at_MAP9_5end
chr4	156298087	156298127	CAGE_peak_2_at_MAP9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I155319	155319310	155320266	0.31	[{'connected_gene': 'MAP9', 'score': 18.66}, {'connected_gene': 'LOC105377502', 'score': 0.39}, {'connected_gene': 'GC04P155235', 'score': 0.18}, {'connected_gene': 'LOC102724776', 'score': 0.11}]
chr4	GH04I155375	155375924	155377678	1.88	[{'connected_gene': 'MAP9', 'score': 550.77}, {'connected_gene': 'LOC102724776', 'score': 7.23}, {'connected_gene': 'LOC105377502', 'score': 0.19}, {'connected_gene': 'GC04P155235', 'score': 0.11}]
chr4	GH04I155391	155391642	155393605	0.85	[{'connected_gene': 'MAP9', 'score': 4.63}, {'connected_gene': 'LOC100420289', 'score': 0.44}, {'connected_gene': 'LOC105377503', 'score': 0.28}, {'connected_gene': 'GC04P155235', 'score': 0.1}]