PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000256257	[[33405272, 33406385], [33406927, 33407010], [33408561, 33408603], [33408861, 33408907], [33416132, 33416289], [33424216, 33424643]]	[[33406270, 33406385], [33406927, 33407010], [33408561, 33408603], [33408861, 33408907], [33416132, 33416289], [33424216, 33424241]]
NM_024787	[[33405271, 33406385], [33406927, 33407010], [33408561, 33408603], [33408861, 33408907], [33416132, 33416289], [33424216, 33424646]]	[[33406270, 33406385], [33406927, 33407010], [33408561, 33408603], [33408861, 33408907], [33416132, 33416289], [33424216, 33424241]]

Promoter

Chrom	Start	End	Description
chr8	33424612	33424619	CAGE_peak_3_at_RNF122_5end
chr8	33424636	33424653	CAGE_peak_1_at_RNF122_5end
chr8	33424654	33424665	CAGE_peak_2_at_RNF122_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I033429	33429638	33430008	0.23	[{'connected_gene': 'FUT10', 'score': 30.12}, {'connected_gene': 'RNF122', 'score': 9.66}, {'connected_gene': 'PIR51386', 'score': 0.77}, {'connected_gene': 'LOC100507379', 'score': 0.44}]
chr8	GH08I033470	33470683	33473923	2.09	[{'connected_gene': 'FUT10', 'score': 593.62}, {'connected_gene': 'SNORD13', 'score': 11.67}, {'connected_gene': 'TTI2', 'score': 11.67}, {'connected_gene': 'LOC100630919', 'score': 11.64}, {'connected_gene': 'ENSG00000252505', 'score': 11.35}, {'connected_gene': 'RPL10P18', 'score': 11.35}, {'connected_gene': 'RNF122', 'score': 11.34}, {'connected_gene': 'LOC100507379', 'score': 0.28}]
chr8	GH08I033553	33553189	33560668	1.25	[{'connected_gene': 'FUT10', 'score': 16.54}, {'connected_gene': 'LOC100630919', 'score': 11.63}, {'connected_gene': 'SNORD13', 'score': 11.6}, {'connected_gene': 'TTI2', 'score': 11.6}, {'connected_gene': 'RNF122', 'score': 4.98}, {'connected_gene': 'RPL10P18', 'score': 0.37}, {'connected_gene': 'GC08P033549', 'score': 0.37}]
chr8	GH08I033574	33574366	33575200	0.8	[{'connected_gene': 'FUT10', 'score': 14.04}, {'connected_gene': 'LOC100630919', 'score': 12.05}, {'connected_gene': 'SNORD13', 'score': 12.03}, {'connected_gene': 'TTI2', 'score': 12.03}, {'connected_gene': 'ENSG00000252505', 'score': 11.86}, {'connected_gene': 'RPL10P18', 'score': 11.86}, {'connected_gene': 'MAK16', 'score': 11.16}, {'connected_gene': 'RNF122', 'score': 4.72}, {'connected_gene': 'RN7SL621P', 'score': 0.44}]
chr8	GH08I033511	33511800	33515383	2.15	[{'connected_gene': 'TTI2', 'score': 596.16}, {'connected_gene': 'SNORD13', 'score': 550.77}, {'connected_gene': 'GC08P033513', 'score': 550.77}, {'connected_gene': 'FUT10', 'score': 42.52}, {'connected_gene': 'MAK16', 'score': 30.71}, {'connected_gene': 'RNF122', 'score': 10.29}]
chr8	GH08I033560	33560957	33567937	2.42	[{'connected_gene': 'RNF122', 'score': 558.73}, {'connected_gene': 'FUT10', 'score': 14.71}, {'connected_gene': 'RPL10P18', 'score': 0.34}, {'connected_gene': 'GC08P033549', 'score': 0.34}]
chr8	GH08I033536	33536123	33536272	0.43	[{'connected_gene': 'RNF122', 'score': 16.22}, {'connected_gene': 'SNORD13', 'score': 11.89}, {'connected_gene': 'TTI2', 'score': 11.89}, {'connected_gene': 'GC08P033550', 'score': 0.77}, {'connected_gene': 'LOC100630919', 'score': 0.39}]
chr8	GH08I033580	33580718	33582316	0.77	[{'connected_gene': 'GC08P033581', 'score': 550.77}, {'connected_gene': 'RN7SL621P', 'score': 550.77}, {'connected_gene': 'FUT10', 'score': 12.98}, {'connected_gene': 'LOC100630919', 'score': 12.01}, {'connected_gene': 'SNORD13', 'score': 11.99}, {'connected_gene': 'TTI2', 'score': 11.99}, {'connected_gene': 'ENSG00000252505', 'score': 11.41}, {'connected_gene': 'RPL10P18', 'score': 11.41}, {'connected_gene': 'MAK16', 'score': 10.87}, {'connected_gene': 'RNF122', 'score': 4.6}, {'connected_gene': 'DUSP26', 'score': 0.37}]
chr8	GH08I033572	33572323	33572472	0.43	[{'connected_gene': 'ENSG00000252505', 'score': 11.86}, {'connected_gene': 'RPL10P18', 'score': 11.86}, {'connected_gene': 'RN7SL621P', 'score': 0.44}, {'connected_gene': 'RNF122', 'score': 0.44}]