PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000378331	[[14920818, 14920918], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	[[14920887, 14920918], [14938844, 14938951]]
ENST00000433779	[[14920846, 14920959], [14923498, 14923644], [14938844, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14944455]]	[[14938847, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14944455]]
ENST00000378325	[[14920861, 14920918], [14923498, 14923644], [14938844, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14945084]]	[[14920887, 14920918], [14923498, 14923644], [14938844, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
ENST00000354919	[[14920887, 14920918], [14923498, 14923644], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]	[[14920887, 14920918], [14923498, 14923644], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
ENST00000313519	[[14920898, 14921126], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	[[14938847, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
ENST00000358298	[[14923498, 14923644], [14941537, 14941684], [14943131, 14943261], [14944404, 14945592]]	[[14923498, 14923644], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
ENST00000420416	[[14920920, 14920959], [14938844, 14939509]]	[[14938847, 14939509]]
ENST00000412254	[[14921814, 14922066], [14923498, 14923644], [14938844, 14939134]]	[[14938847, 14939134]]
NR_034181	[[14920781, 14920918], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	None
NM_001193426	[[14920781, 14920918], [14923498, 14923644], [14938844, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	[[14920887, 14920918], [14923498, 14923644], [14938844, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
NM_001193424	[[14920781, 14920918], [14923498, 14923644], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	[[14920887, 14920918], [14923498, 14923644], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
NM_001193427	[[14920864, 14920959], [14923498, 14923644], [14938844, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	[[14938847, 14938976], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
NM_001193425	[[14920864, 14920959], [14923498, 14923644], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	[[14938847, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]
NM_024670	[[14920898, 14921126], [14938844, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14946314]]	[[14938847, 14939516], [14941537, 14941684], [14943131, 14943261], [14944404, 14944511]]

Promoter

Chrom	Start	End	Description
chr10	14920776	14920787	CAGE_peak_2_at_SUV39H2_5end
chr10	14920793	14920805	CAGE_peak_3_at_SUV39H2_5end
chr10	14920843	14920886	CAGE_peak_1_at_SUV39H2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I014913	14913591	14913885	0.22	[{'connected_gene': 'SUV39H2', 'score': 3.74}, {'connected_gene': 'HSPA14', 'score': 2.05}, {'connected_gene': 'PIR60156', 'score': 0.77}, {'connected_gene': 'GC10P014933', 'score': 0.37}, {'connected_gene': 'DCLRE1C', 'score': 0.26}]
chr10	GH10I014889	14889502	14889651	0.8	[{'connected_gene': 'HSPA14', 'score': 11.11}, {'connected_gene': 'CDNF', 'score': 11.11}, {'connected_gene': 'GAPDHP45', 'score': 10.32}, {'connected_gene': 'RPP38', 'score': 10.25}, {'connected_gene': 'C10orf111', 'score': 10.25}, {'connected_gene': 'PIR33358', 'score': 0.44}, {'connected_gene': 'SUV39H2', 'score': 0.39}, {'connected_gene': 'GC10M014904', 'score': 0.37}]
chr10	GH10I014530	14530763	14534216	1.25	[{'connected_gene': 'CDNF', 'score': 10.46}, {'connected_gene': 'HSPA14', 'score': 10.46}, {'connected_gene': 'SUV39H2', 'score': 9.98}, {'connected_gene': 'DCLRE1CP1', 'score': 9.2}, {'connected_gene': 'ACBD7', 'score': 9.2}, {'connected_gene': 'GAPDHP45', 'score': 9.19}, {'connected_gene': 'FAM107B', 'score': 6.13}, {'connected_gene': 'GC10M014524', 'score': 0.77}, {'connected_gene': 'LOC105376429', 'score': 0.13}]
chr10	GH10I014875	14875634	14880653	2.07	[{'connected_gene': 'ENSG00000272853', 'score': 550.77}, {'connected_gene': 'SUV39H2', 'score': 550.77}, {'connected_gene': 'DCLRE1C', 'score': 43.4}, {'connected_gene': 'RPP38', 'score': 27.69}, {'connected_gene': 'HSPA14', 'score': 21.12}, {'connected_gene': 'CDNF', 'score': 10.46}, {'connected_gene': 'LOC100421372', 'score': 0.28}]
chr10	GH10I014904	14904402	14904511	0.54	[{'connected_gene': 'GC10M014904', 'score': 550.77}, {'connected_gene': 'SUV39H2', 'score': 11.64}, {'connected_gene': 'HSPA14', 'score': 10.88}, {'connected_gene': 'CDNF', 'score': 10.88}, {'connected_gene': 'PIR33358', 'score': 0.34}, {'connected_gene': 'DCLRE1C', 'score': 0.25}]
chr10	GH10I014958	14958801	14961308	2.07	[{'connected_gene': 'GC10M014933', 'score': 550.77}, {'connected_gene': 'MEIG1', 'score': 550.44}, {'connected_gene': 'DCLRE1C', 'score': 27.48}, {'connected_gene': 'HSPA14', 'score': 22.33}, {'connected_gene': 'RPP38', 'score': 12.84}, {'connected_gene': 'SUV39H2', 'score': 10.89}, {'connected_gene': 'CDNF', 'score': 10.05}, {'connected_gene': 'OR7E110P', 'score': 0.31}]