PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr16	58035303	58035361	CAGE_peak_1_at_C16orf57_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I057998	57998091	58002336	2	[{'connected_gene': 'USB1', 'score': 550.77}, {'connected_gene': 'ZNF319', 'score': 550.77}, {'connected_gene': 'TEPP', 'score': 19.85}]
chr16	GH16I057482	57482163	57487479	2.22	[{'connected_gene': 'DOK4', 'score': 563.38}, {'connected_gene': 'CIAPIN1', 'score': 21.15}, {'connected_gene': 'COQ9', 'score': 20.29}, {'connected_gene': 'LOC105371286', 'score': 13.11}, {'connected_gene': 'POLR2C', 'score': 12.07}, {'connected_gene': 'CX3CL1', 'score': 10.1}, {'connected_gene': 'CCL22', 'score': 10.09}, {'connected_gene': 'USB1', 'score': 6.55}, {'connected_gene': 'PIR51542', 'score': 0.37}]
chr16	GH16I058011	58011155	58012781	0.31	[{'connected_gene': 'TEPP', 'score': 19.07}, {'connected_gene': 'USB1', 'score': 0.39}, {'connected_gene': 'ZNF319', 'score': 0.39}, {'connected_gene': 'MMP15', 'score': 0.39}]
chr16	GH16I058005	58005201	58005597	0.68	[{'connected_gene': 'TEPP', 'score': 15.9}, {'connected_gene': 'ZNF319', 'score': 0.77}, {'connected_gene': 'USB1', 'score': 0.44}, {'connected_gene': 'MMP15', 'score': 0.37}]
chr16	GH16I058009	58009834	58010721	0.2	[{'connected_gene': 'TEPP', 'score': 16.71}, {'connected_gene': 'ZNF319', 'score': 0.44}, {'connected_gene': 'USB1', 'score': 0.39}, {'connected_gene': 'MMP15', 'score': 0.37}]
chr16	GH16I058020	58020257	58021373	1.16	[{'connected_gene': 'CNOT1', 'score': 58.47}, {'connected_gene': 'RSPRY1', 'score': 43.75}, {'connected_gene': 'POLR2C', 'score': 29.21}, {'connected_gene': 'CSNK2A2', 'score': 21.71}, {'connected_gene': 'TEPP', 'score': 17.18}, {'connected_gene': 'CCDC102A', 'score': 14.02}, {'connected_gene': 'CNGB1', 'score': 10.94}, {'connected_gene': 'MMP15', 'score': 0.77}, {'connected_gene': 'ZNF319', 'score': 0.34}, {'connected_gene': 'USB1', 'score': 0.34}]
chr16	GH16I057666	57666434	57670400	2.03	[{'connected_gene': 'ADGRG3', 'score': 627.6}, {'connected_gene': 'DRC7', 'score': 14.7}, {'connected_gene': 'RSPRY1', 'score': 14.47}, {'connected_gene': 'ZNF319', 'score': 13.97}, {'connected_gene': 'SETD6', 'score': 11.73}, {'connected_gene': 'ENSG00000261114', 'score': 5.44}, {'connected_gene': 'ENSG00000260467', 'score': 4.85}, {'connected_gene': 'FAM192A', 'score': 2.51}, {'connected_gene': 'USB1', 'score': 1.52}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000561743	[[58033449, 58033587], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58054446]]	[[58036437, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58054149]]
ENST00000219281	[[58035276, 58035485], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58055522]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58054149]]
ENST00000539737	[[58035308, 58035485], [58036382, 58036549], [58043832, 58044016], [58051237, 58051343], [58052875, 58052959], [58054044, 58054538]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58051237, 58051343], [58052875, 58052959], [58054044, 58054149]]
ENST00000423271	[[58035310, 58035485], [58036382, 58036549], [58043832, 58044016], [58044921, 58045612]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58044921, 58045033]]
ENST00000561568	[[58035310, 58035492], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051321]]	[[58035433, 58035492], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051321]]
ENST00000565662	[[58035310, 58035485], [58036382, 58036549], [58043832, 58044016], [58048176, 58048198], [58051237, 58051343], [58052875, 58052940]]	None
ENST00000566292	[[58035319, 58035485], [58036382, 58036549], [58043832, 58044074]]	None
ENST00000569252	[[58035319, 58035485], [58036382, 58036567], [58043832, 58044016], [58048176, 58048214]]	None
ENST00000562534	[[58035319, 58035485], [58036382, 58036403], [58036519, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051344]]	None
ENST00000568848	[[58035322, 58035485], [58036382, 58036549], [58043832, 58044016], [58045345, 58045379]]	None
ENST00000563149	[[58035323, 58035485], [58036382, 58036549], [58043832, 58044016], [58046224, 58047462]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58046224, 58046267]]
ENST00000564387	[[58035324, 58035485], [58036382, 58036494], [58043832, 58044016], [58048176, 58048230], [58051237, 58051284]]	[[58035387, 58035485], [58036382, 58036494], [58043832, 58043910]]
ENST00000563207	[[58035327, 58035485], [58036382, 58036549], [58048176, 58048230], [58051237, 58051322]]	None
ENST00000565151	[[58047532, 58048230], [58051237, 58051343], [58052875, 58052957]]	None
ENST00000566082	[[58049016, 58051343], [58052875, 58052959], [58054044, 58055521]]	None
NM_001330568	[[58033502, 58033587], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58055522]]	[[58036437, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58054149]]
NM_001204911	[[58035276, 58035485], [58036382, 58036549], [58043832, 58044016], [58044921, 58047474]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58044921, 58045033]]
NM_001330569	[[58035276, 58035485], [58036382, 58036549], [58043832, 58044016], [58046224, 58047475]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58046224, 58046267]]
NM_001195302	[[58035276, 58035485], [58036382, 58036549], [58043832, 58044016], [58051237, 58051343], [58052875, 58052959], [58054044, 58055527]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58051237, 58051343], [58052875, 58052959], [58054044, 58054149]]
NM_024598	[[58035276, 58035485], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58055527]]	[[58035387, 58035485], [58036382, 58036549], [58043832, 58044016], [58048176, 58048230], [58051237, 58051343], [58052875, 58052959], [58054044, 58054149]]