PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr3	49907323	49907374	CAGE_peak_1_at_CAMKV_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I049869	49868148	49868297	0.57	[{'connected_gene': 'CAMKV', 'score': 550.77}, {'connected_gene': 'ENSG00000230698', 'score': 12.73}, {'connected_gene': 'MST1R', 'score': 12.71}, {'connected_gene': 'ENSG00000228008', 'score': 12.71}, {'connected_gene': 'IP6K1', 'score': 11.34}, {'connected_gene': 'PHF5EP', 'score': 11.32}, {'connected_gene': 'RN7SL217P', 'score': 0.77}, {'connected_gene': 'GC03P049762', 'score': 0.14}, {'connected_gene': 'GC03P049763', 'score': 0.14}, {'connected_gene': 'GC03P049421', 'score': 0.05}]
chr3	GH03I049868	49868401	49870391	1.44	[{'connected_gene': 'CAMKV', 'score': 550.77}, {'connected_gene': 'RBM6', 'score': 41.03}, {'connected_gene': 'ENSG00000230698', 'score': 12.74}, {'connected_gene': 'MST1R', 'score': 12.73}, {'connected_gene': 'ENSG00000228008', 'score': 12.73}, {'connected_gene': 'IP6K1', 'score': 11.34}, {'connected_gene': 'PHF5EP', 'score': 11.32}, {'connected_gene': 'RN7SL217P', 'score': 0.44}, {'connected_gene': 'GC03P049762', 'score': 0.14}, {'connected_gene': 'GC03P049763', 'score': 0.14}, {'connected_gene': 'GC03P049421', 'score': 0.05}]
chr3	GH03I049872	49872028	49874434	1.02	[{'connected_gene': 'RBM6', 'score': 42.74}, {'connected_gene': 'ZMYND10', 'score': 11.19}, {'connected_gene': 'GNAI2', 'score': 2.89}, {'connected_gene': 'HYAL3', 'score': 1.61}, {'connected_gene': 'NAT6', 'score': 1.6}, {'connected_gene': 'ACTBP13', 'score': 0.77}, {'connected_gene': 'CAMKV', 'score': 0.77}, {'connected_gene': 'GC03P049762', 'score': 0.14}, {'connected_gene': 'GC03P049763', 'score': 0.14}, {'connected_gene': 'GC03P049421', 'score': 0.05}]
chr3	GH03I049867	49867868	49868077	0.63	[{'connected_gene': 'ENSG00000230698', 'score': 12.73}, {'connected_gene': 'MST1R', 'score': 12.71}, {'connected_gene': 'ENSG00000228008', 'score': 12.71}, {'connected_gene': 'IP6K1', 'score': 11.34}, {'connected_gene': 'PHF5EP', 'score': 11.32}, {'connected_gene': 'RN7SL217P', 'score': 0.77}, {'connected_gene': 'CAMKV', 'score': 0.77}, {'connected_gene': 'GC03P049762', 'score': 0.14}, {'connected_gene': 'GC03P049763', 'score': 0.14}, {'connected_gene': 'GC03P049421', 'score': 0.05}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000475665	[[49895420, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907336]]	None
ENST00000296471	[[49895421, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898277], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907338]]	[[49896750, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898277], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]
ENST00000488336	[[49895421, 49897109], [49897202, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907339]]	[[49896750, 49897109], [49897202, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]
ENST00000463537	[[49895421, 49897109], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907364]]	[[49896746, 49897109], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]
ENST00000477224	[[49895421, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907655]]	[[49896750, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]
ENST00000487726	[[49896693, 49897109], [49897202, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899518, 49899609], [49899726, 49899835], [49907190, 49907336]]	[[49898986, 49899010], [49899223, 49899298], [49899518, 49899609], [49899726, 49899821]]
ENST00000467248	[[49896693, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899764, 49899835], [49907190, 49907339]]	[[49896750, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899479]]
ENST00000466940	[[49896725, 49897109], [49897202, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49898881], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907342]]	[[49896750, 49897109], [49897202, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49898881], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]
ENST00000478149	[[49897201, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898457]]	None
ENST00000466535	[[49897632, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49898970], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907338]]	[[49898702, 49898733], [49898871, 49898970], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]
ENST00000483811	[[49897926, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899298], [49899477, 49899609], [49899726, 49899839]]	None
ENST00000480398	[[49898375, 49898451], [49898620, 49898733], [49898871, 49898994], [49899764, 49899835], [49907190, 49907368]]	[[49898375, 49898451], [49898620, 49898733], [49898871, 49898994], [49899764, 49899821]]
ENST00000472895	[[49898391, 49898733], [49898871, 49899298], [49899477, 49899609], [49899726, 49899839]]	None
ENST00000479704	[[49898562, 49898733], [49898871, 49898994], [49899764, 49899835], [49907190, 49907338]]	None
ENST00000498324	[[49898896, 49899010], [49899223, 49899298], [49899477, 49899609], [49899706, 49899835], [49907190, 49907338]]	None
ENST00000476105	[[49899221, 49899298], [49899477, 49899835], [49907190, 49907338]]	None
NM_024046	[[49895413, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907655]]	[[49896750, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]
NM_001320147	[[49895413, 49897109], [49897202, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899835], [49907190, 49907655]]	[[49896750, 49897109], [49897202, 49897314], [49897603, 49897691], [49897903, 49897982], [49898148, 49898285], [49898375, 49898451], [49898612, 49898733], [49898871, 49899010], [49899223, 49899298], [49899477, 49899609], [49899726, 49899821]]