Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000264705 [[27440257, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27448998, 27449187], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466811]] [[27440419, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27448998, 27449187], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466386]]
ENST00000403525 [[27440275, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466653]] [[27440419, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466386]]
ENST00000491891 [[27449091, 27449517], [27449699, 27449830], [27454335, 27454440]] None
ENST00000464159 [[27450368, 27450403], [27454335, 27454448], [27454847, 27455092], [27455315, 27455511]] None
ENST00000475695 [[27455946, 27456008], [27456179, 27456676], [27456875, 27457003]] None
ENST00000479002 [[27457463, 27457553], [27458112, 27458295], [27458403, 27458744]] None
ENST00000458503 [[27458500, 27458508], [27459151, 27459391], [27459595, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461046]] [[27458500, 27458508], [27459151, 27459391], [27459595, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461046]]
ENST00000456311 [[27461985, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463434, 27463485], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464819]] [[27461985, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463434, 27463485], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464819]]
ENST00000487239 [[27462019, 27462100], [27462198, 27462339], [27462564, 27463090]] None
ENST00000491461 [[27462198, 27462339], [27462564, 27462666], [27462963, 27463086]] None
ENST00000428460 [[27464788, 27464991], [27465169, 27465295], [27465487, 27465841], [27466065, 27466160], [27466283, 27466458]] [[27464788, 27464991], [27465169, 27465295], [27465487, 27465841], [27466065, 27466160], [27466283, 27466386]]
NM_001306079 [[27440257, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466660]] [[27440419, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466386]]
NM_004341 [[27440257, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27448998, 27449187], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466660]] [[27440419, 27440501], [27440744, 27440884], [27444085, 27444215], [27445061, 27445204], [27445386, 27445528], [27445733, 27445905], [27446430, 27446616], [27446784, 27446897], [27447212, 27447358], [27447612, 27447744], [27447877, 27448111], [27448572, 27448794], [27448998, 27449187], [27449392, 27449517], [27449699, 27449830], [27454335, 27454448], [27454847, 27455092], [27455315, 27455562], [27455909, 27456008], [27456179, 27456404], [27456493, 27456676], [27456875, 27457094], [27457385, 27457553], [27458112, 27458295], [27458403, 27458508], [27459151, 27459391], [27459616, 27459698], [27460246, 27460413], [27460585, 27460750], [27460923, 27461055], [27461298, 27461500], [27461909, 27462100], [27462198, 27462339], [27462564, 27462666], [27463132, 27463229], [27463778, 27463823], [27463925, 27464095], [27464189, 27464264], [27464778, 27464991], [27465169, 27465295], [27465487, 27465643], [27465739, 27465841], [27466065, 27466160], [27466283, 27466386]]
Promoter
Chrom Start End Description
chr2 27440212 27440221 CAGE_peak_5_at_CAD_5end
chr2 27440229 27440280 CAGE_peak_1_at_CAD_5end
chr2 27440283 27440327 CAGE_peak_2_at_CAD_5end
chr2 27440332 27440380 CAGE_peak_3_at_CAD_5end
chr2 27440383 27440409 CAGE_peak_4_at_CAD_5end
chr2 27456007 27456011 CAGE_peak_6_at_CAD_5end

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