PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000293549	[[49372397, 49372537], [49373250, 49373504], [49374206, 49374472], [49374934, 49375459]]	[[49372433, 49372537], [49373250, 49373504], [49374206, 49374472], [49374934, 49375423]]
NM_005430	[[49372235, 49372537], [49373250, 49373504], [49374206, 49374472], [49374934, 49376396]]	[[49372433, 49372537], [49373250, 49373504], [49374206, 49374472], [49374934, 49375423]]

Promoter

Chrom	Start	End	Description
chr12	49372099	49372110	CAGE_peak_4_at_WNT1_5end
chr12	49372251	49372263	CAGE_peak_2_at_WNT1_5end
chr12	49374041	49374056	CAGE_peak_1_at_WNT1_5end
chr12	49374065	49374083	CAGE_peak_3_at_WNT1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I048932	48932329	48935750	0.49	[{'connected_gene': 'WNT10B', 'score': 18.52}, {'connected_gene': 'CCDC65', 'score': 14.63}, {'connected_gene': 'ARF3', 'score': 12.01}, {'connected_gene': 'WNT1', 'score': 11.61}, {'connected_gene': 'RNU6-940P', 'score': 11.61}, {'connected_gene': 'FKBP11', 'score': 10.96}, {'connected_gene': 'GC12M048929', 'score': 0.44}, {'connected_gene': 'ENSG00000255863', 'score': 0.44}, {'connected_gene': 'ENSG00000272822', 'score': 0.34}]
chr12	GH12I048977	48977196	48982261	1.6	[{'connected_gene': 'WNT1', 'score': 550.77}, {'connected_gene': 'ARF3', 'score': 12.51}, {'connected_gene': 'FKBP11', 'score': 11.21}, {'connected_gene': 'ENSG00000255863', 'score': 10.63}, {'connected_gene': 'WNT10B', 'score': 7.27}, {'connected_gene': 'GC12P049011', 'score': 0.44}]